
PFRMAT TS
TARGET T0353
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0353 model 2 Thu Jun 29 11:50:56 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  2
PARENT N/A
ATOM      2  N   THR    24      12.268  18.073  -1.627  1.00  0.00
ATOM      3  CA  THR    24      13.080  17.342  -0.653  1.00  0.00
ATOM      4  CB  THR    24      12.801  15.828  -0.709  1.00  0.00
ATOM      5  CG2 THR    24      13.632  15.096   0.334  1.00  0.00
ATOM      6  OG1 THR    24      11.412  15.586  -0.450  1.00  0.00
ATOM      7  O   THR    24      15.024  17.518  -2.065  1.00  0.00
ATOM      8  C   THR    24      14.576  17.547  -0.917  1.00  0.00
ATOM      9  N   ASP    25      15.340  17.767   0.151  1.00  0.00
ATOM     10  CA  ASP    25      16.783  17.987   0.039  1.00  0.00
ATOM     11  CB  ASP    25      17.163  19.349   0.623  1.00  0.00
ATOM     12  CG  ASP    25      16.559  20.504  -0.151  1.00  0.00
ATOM     13  OD1 ASP    25      16.694  20.522  -1.392  1.00  0.00
ATOM     14  OD2 ASP    25      15.951  21.392   0.484  1.00  0.00
ATOM     15  O   ASP    25      17.149  16.410   1.816  1.00  0.00
ATOM     16  C   ASP    25      17.583  16.926   0.783  1.00  0.00
ATOM     17  N   VAL    26      18.760  16.613   0.255  1.00  0.00
ATOM     18  CA  VAL    26      19.618  15.610   0.871  1.00  0.00
ATOM     19  CB  VAL    26      20.850  15.307  -0.004  1.00  0.00
ATOM     20  CG1 VAL    26      21.819  14.400   0.739  1.00  0.00
ATOM     21  CG2 VAL    26      20.432  14.614  -1.290  1.00  0.00
ATOM     22  O   VAL    26      20.436  15.262   3.112  1.00  0.00
ATOM     23  C   VAL    26      20.129  16.079   2.239  1.00  0.00
ATOM     24  N   ARG    27      20.201  17.396   2.425  1.00  0.00
ATOM     25  CA  ARG    27      20.663  17.970   3.688  1.00  0.00
ATOM     26  CB  ARG    27      20.847  19.483   3.552  1.00  0.00
ATOM     27  CG  ARG    27      22.030  19.890   2.689  1.00  0.00
ATOM     28  CD  ARG    27      22.105  21.399   2.530  1.00  0.00
ATOM     29  NE  ARG    27      23.232  21.806   1.695  1.00  0.00
ATOM     30  CZ  ARG    27      23.450  23.054   1.291  1.00  0.00
ATOM     31  NH1 ARG    27      24.501  23.331   0.533  1.00  0.00
ATOM     32  NH2 ARG    27      22.616  24.021   1.646  1.00  0.00
ATOM     33  O   ARG    27      20.043  17.535   5.961  1.00  0.00
ATOM     34  C   ARG    27      19.663  17.714   4.806  1.00  0.00
ATOM     35  N   ASP    28      18.384  17.702   4.455  1.00  0.00
ATOM     36  CA  ASP    28      17.329  17.469   5.429  1.00  0.00
ATOM     37  CB  ASP    28      16.288  18.589   5.373  1.00  0.00
ATOM     38  CG  ASP    28      16.873  19.944   5.721  1.00  0.00
ATOM     39  OD1 ASP    28      17.534  20.054   6.775  1.00  0.00
ATOM     40  OD2 ASP    28      16.672  20.897   4.938  1.00  0.00
ATOM     41  O   ASP    28      15.430  15.999   5.408  1.00  0.00
ATOM     42  C   ASP    28      16.625  16.146   5.150  1.00  0.00
ATOM     43  N   ASP    29      17.385  15.182   4.640  1.00  0.00
ATOM     44  CA  ASP    29      16.865  13.861   4.296  1.00  0.00
ATOM     45  CB  ASP    29      18.013  12.886   4.030  1.00  0.00
ATOM     46  CG  ASP    29      17.538  11.571   3.445  1.00  0.00
ATOM     47  OD1 ASP    29      16.314  11.419   3.241  1.00  0.00
ATOM     48  OD2 ASP    29      18.387  10.691   3.191  1.00  0.00
ATOM     49  O   ASP    29      14.823  12.933   5.138  1.00  0.00
ATOM     50  C   ASP    29      16.000  13.210   5.366  1.00  0.00
ATOM     51  N   LYS    30      16.596  12.951   6.523  1.00  0.00
ATOM     52  CA  LYS    30      15.890  12.321   7.634  1.00  0.00
ATOM     53  CB  LYS    30      16.733  12.381   8.909  1.00  0.00
ATOM     54  CG  LYS    30      16.086  11.717  10.113  1.00  0.00
ATOM     55  CD  LYS    30      17.008  11.749  11.322  1.00  0.00
ATOM     56  CE  LYS    30      16.348  11.114  12.535  1.00  0.00
ATOM     57  NZ  LYS    30      17.241  11.132  13.726  1.00  0.00
ATOM     58  O   LYS    30      13.529  12.386   8.114  1.00  0.00
ATOM     59  C   LYS    30      14.562  13.025   7.906  1.00  0.00
ATOM     60  N   LYS    31      14.609  14.353   7.891  1.00  0.00
ATOM     61  CA  LYS    31      13.445  15.189   8.145  1.00  0.00
ATOM     62  CB  LYS    31      13.866  16.646   8.346  1.00  0.00
ATOM     63  CG  LYS    31      14.684  16.889   9.604  1.00  0.00
ATOM     64  CD  LYS    31      15.004  18.363   9.779  1.00  0.00
ATOM     65  CE  LYS    31      15.843  18.603  11.024  1.00  0.00
ATOM     66  NZ  LYS    31      16.189  20.041  11.193  1.00  0.00
ATOM     67  O   LYS    31      11.241  14.977   7.215  1.00  0.00
ATOM     68  C   LYS    31      12.441  15.159   6.996  1.00  0.00
ATOM     69  N   ALA    32       7.514  13.295   3.878  1.00  0.00
ATOM     70  CA  ALA    32       7.068  12.626   2.665  1.00  0.00
ATOM     71  CB  ALA    32       8.260  12.099   1.881  1.00  0.00
ATOM     72  O   ALA    32       5.130  11.263   2.321  1.00  0.00
ATOM     73  C   ALA    32       6.158  11.448   2.975  1.00  0.00
ATOM     74  N   ILE    33       6.530  10.658   3.978  1.00  0.00
ATOM     75  CA  ILE    33       5.731   9.503   4.367  1.00  0.00
ATOM     76  CB  ILE    33       6.423   8.683   5.472  1.00  0.00
ATOM     77  CG1 ILE    33       7.689   8.017   4.928  1.00  0.00
ATOM     78  CG2 ILE    33       5.493   7.598   5.992  1.00  0.00
ATOM     79  CD1 ILE    33       8.570   7.414   5.999  1.00  0.00
ATOM     80  O   ILE    33       3.359   9.300   4.623  1.00  0.00
ATOM     81  C   ILE    33       4.378   9.941   4.894  1.00  0.00
ATOM     82  N   GLU    34       4.366  11.041   5.641  1.00  0.00
ATOM     83  CA  GLU    34       3.125  11.565   6.201  1.00  0.00
ATOM     84  CB  GLU    34       3.417  12.693   7.190  1.00  0.00
ATOM     85  CG  GLU    34       4.073  12.233   8.483  1.00  0.00
ATOM     86  CD  GLU    34       4.459  13.387   9.385  1.00  0.00
ATOM     87  OE1 GLU    34       4.279  14.552   8.970  1.00  0.00
ATOM     88  OE2 GLU    34       4.941  13.129  10.507  1.00  0.00
ATOM     89  O   GLU    34       1.025  11.901   5.080  1.00  0.00
ATOM     90  C   GLU    34       2.236  12.111   5.084  1.00  0.00
ATOM     91  N   PHE    35       2.848  12.805   4.131  1.00  0.00
ATOM     92  CA  PHE    35       2.113  13.357   3.004  1.00  0.00
ATOM     93  CB  PHE    35       3.031  14.214   2.131  1.00  0.00
ATOM     94  CG  PHE    35       2.339  14.835   0.950  1.00  0.00
ATOM     95  CD1 PHE    35       1.533  15.948   1.109  1.00  0.00
ATOM     96  CD2 PHE    35       2.495  14.305  -0.319  1.00  0.00
ATOM     97  CE1 PHE    35       0.898  16.520   0.024  1.00  0.00
ATOM     98  CE2 PHE    35       1.860  14.877  -1.405  1.00  0.00
ATOM     99  CZ  PHE    35       1.064  15.979  -1.237  1.00  0.00
ATOM    100  O   PHE    35       0.444  12.364   1.583  1.00  0.00
ATOM    101  C   PHE    35       1.534  12.236   2.139  1.00  0.00
ATOM    102  N   ALA    36       2.273  11.135   2.031  1.00  0.00
ATOM    103  CA  ALA    36       1.824   9.991   1.243  1.00  0.00
ATOM    104  CB  ALA    36       2.860   8.879   1.283  1.00  0.00
ATOM    105  O   ALA    36      -0.425   9.180   1.062  1.00  0.00
ATOM    106  C   ALA    36       0.518   9.461   1.803  1.00  0.00
ATOM    107  N   LYS    37       0.480   9.302   3.121  1.00  0.00
ATOM    108  CA  LYS    37      -0.708   8.802   3.786  1.00  0.00
ATOM    109  CB  LYS    37      -0.454   8.642   5.287  1.00  0.00
ATOM    110  CG  LYS    37       0.490   7.505   5.639  1.00  0.00
ATOM    111  CD  LYS    37       0.695   7.402   7.141  1.00  0.00
ATOM    112  CE  LYS    37       1.660   6.280   7.492  1.00  0.00
ATOM    113  NZ  LYS    37       1.896   6.189   8.959  1.00  0.00
ATOM    114  O   LYS    37      -3.019   9.296   3.399  1.00  0.00
ATOM    115  C   LYS    37      -1.895   9.743   3.616  1.00  0.00
ATOM    116  N   GLN    38      -1.652  11.047   3.702  1.00  0.00
ATOM    117  CA  GLN    38      -2.740  12.004   3.546  1.00  0.00
ATOM    118  CB  GLN    38      -2.258  13.420   3.868  1.00  0.00
ATOM    119  CG  GLN    38      -1.949  13.652   5.338  1.00  0.00
ATOM    120  CD  GLN    38      -1.336  15.013   5.597  1.00  0.00
ATOM    121  OE1 GLN    38      -1.038  15.759   4.663  1.00  0.00
ATOM    122  NE2 GLN    38      -1.145  15.344   6.869  1.00  0.00
ATOM    123  O   GLN    38      -4.501  11.892   1.922  1.00  0.00
ATOM    124  C   GLN    38      -3.293  12.017   2.127  1.00  0.00
ATOM    125  N   TRP    39      -2.409  12.169   1.145  1.00  0.00
ATOM    126  CA  TRP    39      -2.833  12.223  -0.248  1.00  0.00
ATOM    127  CB  TRP    39      -1.627  12.420  -1.167  1.00  0.00
ATOM    128  CG  TRP    39      -1.979  12.442  -2.622  1.00  0.00
ATOM    129  CD1 TRP    39      -1.752  11.454  -3.536  1.00  0.00
ATOM    130  CD2 TRP    39      -2.623  13.507  -3.334  1.00  0.00
ATOM    131  CE2 TRP    39      -2.756  13.093  -4.675  1.00  0.00
ATOM    132  CE3 TRP    39      -3.104  14.768  -2.969  1.00  0.00
ATOM    133  NE1 TRP    39      -2.214  11.836  -4.772  1.00  0.00
ATOM    134  CZ2 TRP    39      -3.345  13.895  -5.650  1.00  0.00
ATOM    135  CZ3 TRP    39      -3.688  15.560  -3.939  1.00  0.00
ATOM    136  CH2 TRP    39      -3.803  15.124  -5.264  1.00  0.00
ATOM    137  O   TRP    39      -4.665  11.016  -1.217  1.00  0.00
ATOM    138  C   TRP    39      -3.541  10.957  -0.714  1.00  0.00
ATOM    139  N   LEU    40      -2.892   9.810  -0.554  1.00  0.00
ATOM    140  CA  LEU    40      -3.507   8.566  -0.995  1.00  0.00
ATOM    141  CB  LEU    40      -2.565   7.387  -0.746  1.00  0.00
ATOM    142  CG  LEU    40      -1.307   7.327  -1.617  1.00  0.00
ATOM    143  CD1 LEU    40      -0.378   6.218  -1.146  1.00  0.00
ATOM    144  CD2 LEU    40      -1.671   7.056  -3.069  1.00  0.00
ATOM    145  O   LEU    40      -5.772   7.783  -0.836  1.00  0.00
ATOM    146  C   LEU    40      -4.807   8.290  -0.253  1.00  0.00
ATOM    147  N   SER    41      -4.839   8.643   1.026  1.00  0.00
ATOM    148  CA  SER    41      -6.033   8.424   1.830  1.00  0.00
ATOM    149  CB  SER    41      -5.754   8.738   3.301  1.00  0.00
ATOM    150  OG  SER    41      -6.914   8.546   4.093  1.00  0.00
ATOM    151  O   SER    41      -8.313   8.879   1.246  1.00  0.00
ATOM    152  C   SER    41      -7.170   9.321   1.349  1.00  0.00
ATOM    153  N   SER    42      -6.856  10.574   1.032  1.00  0.00
ATOM    154  CA  SER    42      -7.885  11.494   0.573  1.00  0.00
ATOM    155  CB  SER    42      -7.336  12.922   0.506  1.00  0.00
ATOM    156  OG  SER    42      -6.324  13.033  -0.479  1.00  0.00
ATOM    157  O   SER    42      -9.275  11.811  -1.350  1.00  0.00
ATOM    158  C   SER    42      -8.399  11.131  -0.818  1.00  0.00
ATOM    159  N   ILE    43      -7.852  10.070  -1.406  1.00  0.00
ATOM    160  CA  ILE    43      -8.281   9.623  -2.737  1.00  0.00
ATOM    161  CB  ILE    43      -7.086   9.481  -3.697  1.00  0.00
ATOM    162  CG1 ILE    43      -6.112   8.421  -3.183  1.00  0.00
ATOM    163  CG2 ILE    43      -6.342  10.802  -3.819  1.00  0.00
ATOM    164  CD1 ILE    43      -5.026   8.056  -4.173  1.00  0.00
ATOM    165  O   ILE    43      -9.483   7.740  -3.631  1.00  0.00
ATOM    166  C   ILE    43      -8.974   8.264  -2.640  1.00  0.00
ATOM    167  N   GLY    44      -8.990   7.699  -1.437  1.00  0.00
ATOM    168  CA  GLY    44      -9.626   6.411  -1.236  1.00  0.00
ATOM    169  O   GLY    44      -9.225   4.125  -1.832  1.00  0.00
ATOM    170  C   GLY    44      -8.748   5.245  -1.654  1.00  0.00
ATOM    171  N   GLU    45      -7.457   5.513  -1.810  1.00  0.00
ATOM    172  CA  GLU    45      -6.505   4.489  -2.211  1.00  0.00
ATOM    173  CB  GLU    45      -5.648   4.981  -3.377  1.00  0.00
ATOM    174  CG  GLU    45      -4.614   3.973  -3.856  1.00  0.00
ATOM    175  CD  GLU    45      -3.804   4.484  -5.032  1.00  0.00
ATOM    176  OE1 GLU    45      -4.047   5.630  -5.468  1.00  0.00
ATOM    177  OE2 GLU    45      -2.925   3.740  -5.516  1.00  0.00
ATOM    178  O   GLU    45      -5.191   5.038  -0.278  1.00  0.00
ATOM    179  C   GLU    45      -5.595   4.153  -1.034  1.00  0.00
ATOM    180  N   GLU    46      -5.277   2.874  -0.876  1.00  0.00
ATOM    181  CA  GLU    46      -4.420   2.454   0.223  1.00  0.00
ATOM    182  CB  GLU    46      -4.194   0.941   0.178  1.00  0.00
ATOM    183  CG  GLU    46      -3.383   0.400   1.344  1.00  0.00
ATOM    184  CD  GLU    46      -3.226  -1.107   1.294  1.00  0.00
ATOM    185  OE1 GLU    46      -3.776  -1.732   0.361  1.00  0.00
ATOM    186  OE2 GLU    46      -2.551  -1.664   2.185  1.00  0.00
ATOM    187  O   GLU    46      -2.422   3.190  -0.887  1.00  0.00
ATOM    188  C   GLU    46      -3.058   3.128   0.165  1.00  0.00
ATOM    189  N   GLY    47      -2.597   3.652   1.307  1.00  0.00
ATOM    190  CA  GLY    47      -1.298   4.323   1.371  1.00  0.00
ATOM    191  O   GLY    47       0.939   3.778   0.685  1.00  0.00
ATOM    192  C   GLY    47      -0.158   3.362   1.056  1.00  0.00
ATOM    193  N   ALA    48      -0.429   2.070   1.211  1.00  0.00
ATOM    194  CA  ALA    48       0.570   1.043   0.943  1.00  0.00
ATOM    195  CB  ALA    48       0.042  -0.327   1.336  1.00  0.00
ATOM    196  O   ALA    48       2.045   0.504  -0.864  1.00  0.00
ATOM    197  C   ALA    48       0.960   0.975  -0.530  1.00  0.00
ATOM    198  N   THR    49       0.076   1.459  -1.395  1.00  0.00
ATOM    199  CA  THR    49       0.306   1.465  -2.840  1.00  0.00
ATOM    200  CB  THR    49      -0.749   2.312  -3.576  1.00  0.00
ATOM    201  CG2 THR    49      -2.138   1.732  -3.368  1.00  0.00
ATOM    202  OG1 THR    49      -0.724   3.653  -3.073  1.00  0.00
ATOM    203  O   THR    49       2.211   1.797  -4.252  1.00  0.00
ATOM    204  C   THR    49       1.671   2.040  -3.178  1.00  0.00
ATOM    205  N   VAL    50       2.218   2.816  -2.254  1.00  0.00
ATOM    206  CA  VAL    50       3.517   3.439  -2.447  1.00  0.00
ATOM    207  CB  VAL    50       3.409   4.974  -2.465  1.00  0.00
ATOM    208  CG1 VAL    50       4.783   5.603  -2.640  1.00  0.00
ATOM    209  CG2 VAL    50       2.521   5.434  -3.609  1.00  0.00
ATOM    210  O   VAL    50       4.215   3.456  -0.158  1.00  0.00
ATOM    211  C   VAL    50       4.388   2.990  -1.282  1.00  0.00
ATOM    212  N   THR    51       5.329   2.067  -1.532  1.00  0.00
ATOM    213  CA  THR    51       6.213   1.567  -0.468  1.00  0.00
ATOM    214  CB  THR    51       7.301   0.633  -1.030  1.00  0.00
ATOM    215  CG2 THR    51       8.175   0.096   0.093  1.00  0.00
ATOM    216  OG1 THR    51       6.685  -0.471  -1.705  1.00  0.00
ATOM    217  O   THR    51       7.466   3.610  -0.309  1.00  0.00
ATOM    218  C   THR    51       6.953   2.667   0.292  1.00  0.00
ATOM    219  N   SER    52       7.008   2.534   1.614  1.00  0.00
ATOM    220  CA  SER    52       7.677   3.520   2.451  1.00  0.00
ATOM    221  CB  SER    52       7.740   3.037   3.902  1.00  0.00
ATOM    222  OG  SER    52       8.542   1.874   4.017  1.00  0.00
ATOM    223  O   SER    52       9.709   4.780   2.266  1.00  0.00
ATOM    224  C   SER    52       9.093   3.759   1.960  1.00  0.00
ATOM    225  N   GLU    53       9.596   2.803   1.190  1.00  0.00
ATOM    226  CA  GLU    53      10.947   2.852   0.646  1.00  0.00
ATOM    227  CB  GLU    53      11.325   1.504   0.029  1.00  0.00
ATOM    228  CG  GLU    53      11.488   0.383   1.042  1.00  0.00
ATOM    229  CD  GLU    53      11.755  -0.959   0.387  1.00  0.00
ATOM    230  OE1 GLU    53      11.788  -1.014  -0.860  1.00  0.00
ATOM    231  OE2 GLU    53      11.931  -1.954   1.122  1.00  0.00
ATOM    232  O   GLU    53      12.251   4.260  -0.799  1.00  0.00
ATOM    233  C   GLU    53      11.126   3.908  -0.450  1.00  0.00
ATOM    234  N   GLU    54      10.023   4.422  -0.981  1.00  0.00
ATOM    235  CA  GLU    54      10.093   5.405  -2.059  1.00  0.00
ATOM    236  CB  GLU    54       8.691   5.891  -2.433  1.00  0.00
ATOM    237  CG  GLU    54       7.836   4.844  -3.127  1.00  0.00
ATOM    238  CD  GLU    54       8.463   4.337  -4.410  1.00  0.00
ATOM    239  OE1 GLU    54       8.830   5.173  -5.262  1.00  0.00
ATOM    240  OE2 GLU    54       8.589   3.104  -4.565  1.00  0.00
ATOM    241  O   GLU    54      11.471   7.275  -2.627  1.00  0.00
ATOM    242  C   GLU    54      10.902   6.655  -1.729  1.00  0.00
ATOM    243  N   CYS    55      10.965   7.017  -0.449  1.00  0.00
ATOM    244  CA  CYS    55      11.690   8.212  -0.027  1.00  0.00
ATOM    245  CB  CYS    55      11.574   8.403   1.486  1.00  0.00
ATOM    246  SG  CYS    55       9.900   8.769   2.065  1.00  0.00
ATOM    247  O   CYS    55      13.827   9.229  -0.459  1.00  0.00
ATOM    248  C   CYS    55      13.186   8.183  -0.346  1.00  0.00
ATOM    249  N   ARG    56      13.738   6.986  -0.501  1.00  0.00
ATOM    250  CA  ARG    56      15.158   6.842  -0.803  1.00  0.00
ATOM    251  CB  ARG    56      15.623   5.413  -0.520  1.00  0.00
ATOM    252  CG  ARG    56      15.655   5.050   0.955  1.00  0.00
ATOM    253  CD  ARG    56      16.137   3.624   1.165  1.00  0.00
ATOM    254  NE  ARG    56      16.168   3.259   2.579  1.00  0.00
ATOM    255  CZ  ARG    56      16.373   2.024   3.027  1.00  0.00
ATOM    256  NH1 ARG    56      16.385   1.786   4.331  1.00  0.00
ATOM    257  NH2 ARG    56      16.567   1.031   2.169  1.00  0.00
ATOM    258  O   ARG    56      16.676   7.427  -2.569  1.00  0.00
ATOM    259  C   ARG    56      15.516   7.138  -2.258  1.00  0.00
ATOM    260  N   PHE    57      14.530   7.084  -3.148  1.00  0.00
ATOM    261  CA  PHE    57      14.809   7.291  -4.561  1.00  0.00
ATOM    262  CB  PHE    57      14.237   6.141  -5.394  1.00  0.00
ATOM    263  CG  PHE    57      14.834   4.802  -5.071  1.00  0.00
ATOM    264  CD1 PHE    57      14.133   3.880  -4.313  1.00  0.00
ATOM    265  CD2 PHE    57      16.097   4.464  -5.524  1.00  0.00
ATOM    266  CE1 PHE    57      14.682   2.647  -4.015  1.00  0.00
ATOM    267  CE2 PHE    57      16.645   3.230  -5.227  1.00  0.00
ATOM    268  CZ  PHE    57      15.945   2.325  -4.475  1.00  0.00
ATOM    269  O   PHE    57      14.371   8.692  -6.452  1.00  0.00
ATOM    270  C   PHE    57      14.263   8.549  -5.231  1.00  0.00
ATOM    271  N   CYS    58      13.695   9.471  -4.456  1.00  0.00
ATOM    272  CA  CYS    58      13.152  10.694  -5.046  1.00  0.00
ATOM    273  CB  CYS    58      11.645  10.787  -4.795  1.00  0.00
ATOM    274  SG  CYS    58      10.684   9.435  -5.515  1.00  0.00
ATOM    275  O   CYS    58      13.086  12.940  -4.212  1.00  0.00
ATOM    276  C   CYS    58      13.779  11.960  -4.479  1.00  0.00
ATOM    277  N   HIS    59      15.099  11.949  -4.325  1.00  0.00
ATOM    278  CA  HIS    59      15.828  13.083  -3.775  1.00  0.00
ATOM    279  CB  HIS    59      16.587  12.670  -2.513  1.00  0.00
ATOM    280  CG  HIS    59      15.698  12.331  -1.357  1.00  0.00
ATOM    281  CD2 HIS    59      14.270  12.417  -1.086  1.00  0.00
ATOM    282  ND1 HIS    59      16.177  11.798  -0.180  1.00  0.00
ATOM    283  CE1 HIS    59      15.147  11.603   0.663  1.00  0.00
ATOM    284  NE2 HIS    59      14.001  11.972   0.126  1.00  0.00
ATOM    285  O   HIS    59      17.628  12.962  -5.339  1.00  0.00
ATOM    286  C   HIS    59      16.855  13.681  -4.713  1.00  0.00
ATOM    287  N   SER    60      16.865  15.006  -4.787  1.00  0.00
ATOM    288  CA  SER    60      17.826  15.737  -5.605  1.00  0.00
ATOM    289  CB  SER    60      19.244  15.215  -5.362  1.00  0.00
ATOM    290  OG  SER    60      20.212  16.102  -5.895  1.00  0.00
ATOM    291  O   SER    60      16.581  15.084  -7.543  1.00  0.00
ATOM    292  C   SER    60      17.582  15.632  -7.096  1.00  0.00
ATOM    293  N   ALA    63      18.519  16.174  -7.860  1.00  0.00
ATOM    294  CA  ALA    63      18.431  16.145  -9.307  1.00  0.00
ATOM    295  CB  ALA    63      18.387  17.560  -9.864  1.00  0.00
ATOM    296  O   ALA    63      20.790  15.885  -9.635  1.00  0.00
ATOM    297  C   ALA    63      19.662  15.419  -9.815  1.00  0.00
ATOM    298  N   PRO    64      19.443  14.272 -10.442  1.00  0.00
ATOM    299  CA  PRO    64      20.534  13.487 -10.982  1.00  0.00
ATOM    300  CB  PRO    64      20.087  12.039 -10.776  1.00  0.00
ATOM    301  CG  PRO    64      18.597  12.093 -10.858  1.00  0.00
ATOM    302  CD  PRO    64      18.205  13.470 -10.402  1.00  0.00
ATOM    303  O   PRO    64      19.740  13.858 -13.217  1.00  0.00
ATOM    304  C   PRO    64      20.703  13.840 -12.450  1.00  0.00
ATOM    305  N   ASP    65      21.936  14.126 -12.836  1.00  0.00
ATOM    306  CA  ASP    65      22.223  14.497 -14.206  1.00  0.00
ATOM    307  CB  ASP    65      23.734  14.590 -14.431  1.00  0.00
ATOM    308  CG  ASP    65      24.348  15.808 -13.770  1.00  0.00
ATOM    309  OD1 ASP    65      23.584  16.696 -13.336  1.00  0.00
ATOM    310  OD2 ASP    65      25.592  15.876 -13.689  1.00  0.00
ATOM    311  O   ASP    65      21.126  13.936 -16.268  1.00  0.00
ATOM    312  C   ASP    65      21.690  13.515 -15.260  1.00  0.00
ATOM    313  N   GLU    66      21.858  12.197 -15.044  1.00  0.00
ATOM    314  CA  GLU    66      21.361  11.231 -16.036  1.00  0.00
ATOM    315  CB  GLU    66      21.706   9.802 -15.611  1.00  0.00
ATOM    316  CG  GLU    66      23.185   9.467 -15.707  1.00  0.00
ATOM    317  CD  GLU    66      23.505   8.088 -15.163  1.00  0.00
ATOM    318  OE1 GLU    66      22.585   7.425 -14.644  1.00  0.00
ATOM    319  OE2 GLU    66      24.680   7.671 -15.257  1.00  0.00
ATOM    320  O   GLU    66      19.317  11.197 -17.310  1.00  0.00
ATOM    321  C   GLU    66      19.842  11.313 -16.201  1.00  0.00
ATOM    322  N   VAL    67      19.139  11.521 -15.097  1.00  0.00
ATOM    323  CA  VAL    67      17.696  11.610 -15.155  1.00  0.00
ATOM    324  CB  VAL    67      17.073  11.595 -13.745  1.00  0.00
ATOM    325  CG1 VAL    67      15.580  11.879 -13.820  1.00  0.00
ATOM    326  CG2 VAL    67      17.271  10.238 -13.089  1.00  0.00
ATOM    327  O   VAL    67      16.241  12.892 -16.558  1.00  0.00
ATOM    328  C   VAL    67      17.236  12.894 -15.839  1.00  0.00
ATOM    329  N   ILE    68      17.966  13.990 -15.631  1.00  0.00
ATOM    330  CA  ILE    68      17.613  15.249 -16.278  1.00  0.00
ATOM    331  CB  ILE    68      18.528  16.398 -15.813  1.00  0.00
ATOM    332  CG1 ILE    68      18.271  16.721 -14.339  1.00  0.00
ATOM    333  CG2 ILE    68      18.268  17.652 -16.634  1.00  0.00
ATOM    334  CD1 ILE    68      19.300  17.647 -13.730  1.00  0.00
ATOM    335  O   ILE    68      16.995  15.643 -18.562  1.00  0.00
ATOM    336  C   ILE    68      17.760  15.076 -17.780  1.00  0.00
ATOM    337  N   GLU    69      18.768  14.304 -18.180  1.00  0.00
ATOM    338  CA  GLU    69      19.041  14.050 -19.594  1.00  0.00
ATOM    339  CB  GLU    69      20.335  13.249 -19.755  1.00  0.00
ATOM    340  CG  GLU    69      21.595  14.030 -19.414  1.00  0.00
ATOM    341  CD  GLU    69      22.843  13.171 -19.465  1.00  0.00
ATOM    342  OE1 GLU    69      22.716  11.950 -19.696  1.00  0.00
ATOM    343  OE2 GLU    69      23.949  13.720 -19.274  1.00  0.00
ATOM    344  O   GLU    69      17.507  13.541 -21.380  1.00  0.00
ATOM    345  C   GLU    69      17.910  13.252 -20.254  1.00  0.00
ATOM    346  N   ALA    70      17.402  12.252 -19.544  1.00  0.00
ATOM    347  CA  ALA    70      16.316  11.424 -20.056  1.00  0.00
ATOM    348  CB  ALA    70      16.063  10.246 -19.129  1.00  0.00
ATOM    349  O   ALA    70      14.496  12.436 -21.252  1.00  0.00
ATOM    350  C   ALA    70      15.024  12.233 -20.168  1.00  0.00
ATOM    351  N   ILE    71      14.519  12.689 -19.033  1.00  0.00
ATOM    352  CA  ILE    71      13.295  13.463 -19.020  1.00  0.00
ATOM    353  CB  ILE    71      12.930  13.917 -17.595  1.00  0.00
ATOM    354  CG1 ILE    71      12.696  12.703 -16.693  1.00  0.00
ATOM    355  CG2 ILE    71      11.662  14.756 -17.612  1.00  0.00
ATOM    356  CD1 ILE    71      12.536  13.052 -15.229  1.00  0.00
ATOM    357  O   ILE    71      12.436  15.150 -20.501  1.00  0.00
ATOM    358  C   ILE    71      13.406  14.726 -19.879  1.00  0.00
TER
END



