
PFRMAT TS
TARGET T0283
AUTHOR SAM_T06_server
REMARK   6 
REMARK   6 T0283 model 5 Wed May 10 14:04:52 2006
METHOD The SAM-T06 server uses methods similar to SAM_T04 in CASP6 and
METHOD the SAM-T02 method in CASP5.
METHOD 
METHOD We start with a fully automated method:
METHOD    
METHOD     Use the SAM-T2K and SAM-T04 methods for finding homologs of the
METHOD       target and aligning them.
METHOD 
METHOD     Make local structure predictions using neural nets and the
METHOD       multiple alignments.  Different neural nets are used for the
METHOD       SAM-T2K alignments and the SAM-T04 alignments.
METHOD       We currently use 8 local-structure alphabets: 
METHOD 	DSSP
METHOD 	STRIDE
METHOD 	STR2	an extended version of DSSP that splits the beta strands
METHOD 		into multiple classes (parallel/antiparallel/mixed,
METHOD 					edge/center)
METHOD 	ALPHA	an discretization of the alpha torsion angle:
METHOD 		CA(i-i), CA(i), CA(i+1), CA(i+2)
METHOD 	BYS	a discretization of Ramachandran plots, due to Bystroff
METHOD 	CB_burial_14_7	a 7-state discretization of the number of C_beta
METHOD 		atoms in a 14 Angstrom radius sphere around the C_beta.
METHOD 	near-backbone-11 an 11-state discretization of the number of
METHOD 	      residues (represented by near-backbone points) in a 
METHOD 	      9.65 Angstrom radius sphere around the sidechain proxy
METHOD 	      spot for the residue.
METHOD 	DSSP_EHL2	CASP's collapse of the DSSP alphabet
METHOD 			DSSP_EHL2 is not predicted directly by a
METHOD 			neural net, but is computed as a weighted
METHOD 			average of the other backbone alphabet predictions. 
METHOD     
METHOD     We make 2-track HMMs with each alphabet (1.0 amino acid + 0.3 local structure)
METHOD       and use them to score a template library of 6400 (t04) or 9900 (t2k) templates
METHOD       We also used a single-track HMM to score not just the template
METHOD       library, but a non-redundant copy of the entire PDB.
METHOD 
METHOD     We also made a few 3-track HMMs (AA, str2, CB_burial_14_7 and 
METHOD       AA, str2, near-backbone-11) for finding and aligning more remote
METHOD       homologs.
METHOD     
METHOD     One-track HMMs built from the template library multiple alignments
METHOD        were used to score the target sequence (for early targets, only
METHOD        t2k template library was searched this way).
METHOD 
METHOD     All the logs of e-values were combined in a weighted average (with
METHOD        rather arbitrary weights, since we did not have time to
METHOD        optimize them), and the best templates ranked.  Ranking was
METHOD        separate for predictions from the t2k and t04 multiple alignments.
METHOD     
METHOD     Alignments of the target to the top templates were made using
METHOD       several different alignment methods (mainly using the SAM hmmscore
METHOD       program, but a few alignments were made with Bob Edgar's MUSCLE
METHOD       profile-profile aligner).
METHOD 
METHOD     Generate fragments (short 9-residue alignments for each position)
METHOD       using SAM's "fragfinder" program and the 3-track HMM.
METHOD 
METHOD     Then the "undertaker" program (named because it optimizes burial)
METHOD       is used to try to combine the alignments and the fragments into
METHOD       a consistent 3D model.  No single alignment or parent template
METHOD       was used, though in many cases one had much more influence than
METHOD       the others.  The alignment scores were not passed to undertaker,
METHOD       but were used only to pick the set of alignments and fragments
METHOD       that undertaker would see.  Helix and strand constraints
METHOD       generated from the secondary-structure predictions are passed to
METHOD       undertaker to use in the cost function.
METHOD 
METHOD     One important change in this server over previous methods is that
METHOD     sheet constraints are extracted from the top few alignments and
METHOD     passed to undertaker. 
METHOD -------------
MODEL  5
PARENT N/A
ATOM      2  N   ASN    12     -21.876  14.291   2.271  1.00  0.00
ATOM      3  CA  ASN    12     -21.599  14.943   3.548  1.00  0.00
ATOM      4  CB  ASN    12     -22.737  14.689   4.538  1.00  0.00
ATOM      5  CG  ASN    12     -24.027  15.374   4.130  1.00  0.00
ATOM      6  ND2 ASN    12     -25.077  14.585   3.928  1.00  0.00
ATOM      7  OD1 ASN    12     -24.078  16.596   3.999  1.00  0.00
ATOM      8  O   ASN    12     -19.725  13.460   3.527  1.00  0.00
ATOM      9  C   ASN    12     -20.297  14.373   4.113  1.00  0.00
ATOM     10  N   ASP    13     -19.847  14.891   5.253  1.00  0.00
ATOM     11  CA  ASP    13     -18.602  14.430   5.873  1.00  0.00
ATOM     12  CB  ASP    13     -18.480  14.972   7.298  1.00  0.00
ATOM     13  CG  ASP    13     -18.143  16.450   7.333  1.00  0.00
ATOM     14  OD1 ASP    13     -17.812  17.008   6.265  1.00  0.00
ATOM     15  OD2 ASP    13     -18.209  17.050   8.425  1.00  0.00
ATOM     16  O   ASP    13     -17.582  12.328   5.363  1.00  0.00
ATOM     17  C   ASP    13     -18.465  12.918   5.983  1.00  0.00
ATOM     18  N   LYS    14     -19.353  12.293   6.749  1.00  0.00
ATOM     19  CA  LYS    14     -19.318  10.846   6.929  1.00  0.00
ATOM     20  CB  LYS    14     -20.465  10.391   7.834  1.00  0.00
ATOM     21  CG  LYS    14     -20.310  10.802   9.289  1.00  0.00
ATOM     22  CD  LYS    14     -21.486  10.324  10.125  1.00  0.00
ATOM     23  CE  LYS    14     -21.332  10.739  11.579  1.00  0.00
ATOM     24  NZ  LYS    14     -22.493  10.305  12.406  1.00  0.00
ATOM     25  O   LYS    14     -18.939   9.034   5.396  1.00  0.00
ATOM     26  C   LYS    14     -19.451  10.138   5.580  1.00  0.00
ATOM     27  N   ARG    15     -20.121  10.794   4.636  1.00  0.00
ATOM     28  CA  ARG    15     -20.297  10.248   3.294  1.00  0.00
ATOM     29  CB  ARG    15     -21.436  10.968   2.568  1.00  0.00
ATOM     30  CG  ARG    15     -22.816  10.674   3.133  1.00  0.00
ATOM     31  CD  ARG    15     -23.895  11.428   2.374  1.00  0.00
ATOM     32  NE  ARG    15     -25.231  11.139   2.891  1.00  0.00
ATOM     33  CZ  ARG    15     -26.329  11.796   2.532  1.00  0.00
ATOM     34  NH1 ARG    15     -27.501  11.463   3.055  1.00  0.00
ATOM     35  NH2 ARG    15     -26.252  12.784   1.651  1.00  0.00
ATOM     36  O   ARG    15     -18.684   9.605   1.639  1.00  0.00
ATOM     37  C   ARG    15     -19.011  10.426   2.491  1.00  0.00
ATOM     38  N   GLU    16     -18.288  11.506   2.769  1.00  0.00
ATOM     39  CA  GLU    16     -17.046  11.815   2.073  1.00  0.00
ATOM     40  CB  GLU    16     -16.498  13.168   2.532  1.00  0.00
ATOM     41  CG  GLU    16     -15.216  13.587   1.830  1.00  0.00
ATOM     42  CD  GLU    16     -14.675  14.906   2.346  1.00  0.00
ATOM     43  OE1 GLU    16     -15.313  15.501   3.240  1.00  0.00
ATOM     44  OE2 GLU    16     -13.613  15.346   1.856  1.00  0.00
ATOM     45  O   GLU    16     -15.515  10.072   1.465  1.00  0.00
ATOM     46  C   GLU    16     -16.014  10.738   2.371  1.00  0.00
ATOM     47  N   TRP    17     -15.727  10.543   3.653  1.00  0.00
ATOM     48  CA  TRP    17     -14.761   9.539   4.079  1.00  0.00
ATOM     49  CB  TRP    17     -14.725   9.443   5.604  1.00  0.00
ATOM     50  CG  TRP    17     -13.720   8.460   6.121  1.00  0.00
ATOM     51  CD1 TRP    17     -13.975   7.228   6.649  1.00  0.00
ATOM     52  CD2 TRP    17     -12.297   8.627   6.157  1.00  0.00
ATOM     53  CE2 TRP    17     -11.755   7.454   6.720  1.00  0.00
ATOM     54  CE3 TRP    17     -11.429   9.652   5.769  1.00  0.00
ATOM     55  NE1 TRP    17     -12.799   6.615   7.013  1.00  0.00
ATOM     56  CZ2 TRP    17     -10.384   7.280   6.904  1.00  0.00
ATOM     57  CZ3 TRP    17     -10.072   9.473   5.953  1.00  0.00
ATOM     58  CH2 TRP    17      -9.559   8.299   6.514  1.00  0.00
ATOM     59  O   TRP    17     -14.249   7.408   3.103  1.00  0.00
ATOM     60  C   TRP    17     -15.125   8.166   3.522  1.00  0.00
ATOM     61  N   LYS    18     -16.419   7.859   3.512  1.00  0.00
ATOM     62  CA  LYS    18     -16.915   6.572   3.020  1.00  0.00
ATOM     63  CB  LYS    18     -18.399   6.408   3.350  1.00  0.00
ATOM     64  CG  LYS    18     -18.989   5.076   2.915  1.00  0.00
ATOM     65  CD  LYS    18     -20.439   4.946   3.349  1.00  0.00
ATOM     66  CE  LYS    18     -21.038   3.627   2.885  1.00  0.00
ATOM     67  NZ  LYS    18     -22.475   3.510   3.256  1.00  0.00
ATOM     68  O   LYS    18     -16.299   5.357   1.041  1.00  0.00
ATOM     69  C   LYS    18     -16.784   6.390   1.508  1.00  0.00
ATOM     70  N   ALA    19     -17.242   7.373   0.748  1.00  0.00
ATOM     71  CA  ALA    19     -17.152   7.294  -0.697  1.00  0.00
ATOM     72  CB  ALA    19     -17.750   8.538  -1.335  1.00  0.00
ATOM     73  O   ALA    19     -15.291   6.365  -1.898  1.00  0.00
ATOM     74  C   ALA    19     -15.672   7.182  -1.060  1.00  0.00
ATOM     75  N   MET    20     -14.831   7.957  -0.376  1.00  0.00
ATOM     76  CA  MET    20     -13.385   7.925  -0.613  1.00  0.00
ATOM     77  CB  MET    20     -12.676   8.960   0.262  1.00  0.00
ATOM     78  CG  MET    20     -12.955  10.402  -0.133  1.00  0.00
ATOM     79  SD  MET    20     -12.209  11.590   1.000  1.00  0.00
ATOM     80  CE  MET    20     -10.469  11.342   0.655  1.00  0.00
ATOM     81  O   MET    20     -12.080   5.952  -1.062  1.00  0.00
ATOM     82  C   MET    20     -12.832   6.539  -0.277  1.00  0.00
ATOM     83  N   GLU    21     -13.260   5.997   0.859  1.00  0.00
ATOM     84  CA  GLU    21     -12.805   4.680   1.276  1.00  0.00
ATOM     85  CB  GLU    21     -13.436   4.293   2.614  1.00  0.00
ATOM     86  CG  GLU    21     -12.967   2.954   3.159  1.00  0.00
ATOM     87  CD  GLU    21     -13.570   2.631   4.512  1.00  0.00
ATOM     88  OE1 GLU    21     -14.339   3.466   5.034  1.00  0.00
ATOM     89  OE2 GLU    21     -13.272   1.546   5.051  1.00  0.00
ATOM     90  O   GLU    21     -12.361   2.729  -0.048  1.00  0.00
ATOM     91  C   GLU    21     -13.170   3.606   0.272  1.00  0.00
ATOM     92  N   ALA    22     -14.390   3.702  -0.248  1.00  0.00
ATOM     93  CA  ALA    22     -14.896   2.759  -1.232  1.00  0.00
ATOM     94  CB  ALA    22     -16.359   3.043  -1.534  1.00  0.00
ATOM     95  O   ALA    22     -13.744   1.864  -3.140  1.00  0.00
ATOM     96  C   ALA    22     -14.097   2.874  -2.526  1.00  0.00
ATOM     97  N   ARG    23     -13.786   4.104  -2.918  1.00  0.00
ATOM     98  CA  ARG    23     -13.021   4.345  -4.133  1.00  0.00
ATOM     99  CB  ARG    23     -12.932   5.845  -4.422  1.00  0.00
ATOM    100  CG  ARG    23     -14.244   6.469  -4.868  1.00  0.00
ATOM    101  CD  ARG    23     -14.104   7.971  -5.058  1.00  0.00
ATOM    102  NE  ARG    23     -15.359   8.589  -5.479  1.00  0.00
ATOM    103  CZ  ARG    23     -15.547   9.900  -5.588  1.00  0.00
ATOM    104  NH1 ARG    23     -16.723  10.372  -5.978  1.00  0.00
ATOM    105  NH2 ARG    23     -14.557  10.737  -5.307  1.00  0.00
ATOM    106  O   ARG    23     -11.017   3.297  -4.952  1.00  0.00
ATOM    107  C   ARG    23     -11.599   3.794  -3.989  1.00  0.00
ATOM    108  N   ALA    24     -11.046   3.861  -2.784  1.00  0.00
ATOM    109  CA  ALA    24      -9.701   3.340  -2.551  1.00  0.00
ATOM    110  CB  ALA    24      -9.241   3.670  -1.140  1.00  0.00
ATOM    111  O   ALA    24      -8.746   1.281  -3.303  1.00  0.00
ATOM    112  C   ALA    24      -9.684   1.835  -2.726  1.00  0.00
ATOM    113  N   LYS    25     -10.734   1.182  -2.230  1.00  0.00
ATOM    114  CA  LYS    25     -10.872  -0.271  -2.328  1.00  0.00
ATOM    115  CB  LYS    25     -12.032  -0.758  -1.457  1.00  0.00
ATOM    116  CG  LYS    25     -11.771  -0.659   0.037  1.00  0.00
ATOM    117  CD  LYS    25     -12.959  -1.162   0.839  1.00  0.00
ATOM    118  CE  LYS    25     -12.713  -1.030   2.333  1.00  0.00
ATOM    119  NZ  LYS    25     -13.879  -1.499   3.132  1.00  0.00
ATOM    120  O   LYS    25     -10.684  -1.766  -4.202  1.00  0.00
ATOM    121  C   LYS    25     -11.146  -0.714  -3.767  1.00  0.00
ATOM    122  N   ALA    26     -11.895   0.090  -4.507  1.00  0.00
ATOM    123  CA  ALA    26     -12.199  -0.257  -5.880  1.00  0.00
ATOM    124  CB  ALA    26     -13.460   0.458  -6.341  1.00  0.00
ATOM    125  O   ALA    26     -11.124  -0.278  -8.005  1.00  0.00
ATOM    126  C   ALA    26     -11.087   0.122  -6.846  1.00  0.00
ATOM    127  N   LEU    27       4.661   4.334 -13.767  1.00  0.00
ATOM    128  CA  LEU    27       5.809   4.703 -12.941  1.00  0.00
ATOM    129  CB  LEU    27       5.344   5.364 -11.643  1.00  0.00
ATOM    130  CG  LEU    27       4.641   6.716 -11.784  1.00  0.00
ATOM    131  CD1 LEU    27       4.122   7.196 -10.437  1.00  0.00
ATOM    132  CD2 LEU    27       5.597   7.767 -12.326  1.00  0.00
ATOM    133  O   LEU    27       6.170   2.343 -12.798  1.00  0.00
ATOM    134  C   LEU    27       6.630   3.462 -12.588  1.00  0.00
ATOM    135  N   PRO    28       7.865   3.646 -12.079  1.00  0.00
ATOM    136  CA  PRO    28       8.722   2.516 -11.712  1.00  0.00
ATOM    137  CB  PRO    28       9.858   3.157 -10.913  1.00  0.00
ATOM    138  CG  PRO    28       9.935   4.555 -11.429  1.00  0.00
ATOM    139  CD  PRO    28       8.517   4.984 -11.684  1.00  0.00
ATOM    140  O   PRO    28       7.266   1.790  -9.945  1.00  0.00
ATOM    141  C   PRO    28       8.010   1.465 -10.873  1.00  0.00
ATOM    142  N   LYS    29       8.272   0.204 -11.206  1.00  0.00
ATOM    143  CA  LYS    29       7.691  -0.964 -10.548  1.00  0.00
ATOM    144  CB  LYS    29       8.406  -2.241 -10.997  1.00  0.00
ATOM    145  CG  LYS    29       8.122  -2.640 -12.436  1.00  0.00
ATOM    146  CD  LYS    29       8.860  -3.915 -12.811  1.00  0.00
ATOM    147  CE  LYS    29       8.609  -4.291 -14.263  1.00  0.00
ATOM    148  NZ  LYS    29       9.327  -5.536 -14.646  1.00  0.00
ATOM    149  O   LYS    29       6.893  -1.431  -8.321  1.00  0.00
ATOM    150  C   LYS    29       7.780  -0.924  -9.020  1.00  0.00
ATOM    151  N   GLU    30       8.846  -0.307  -8.509  1.00  0.00
ATOM    152  CA  GLU    30       9.073  -0.196  -7.069  1.00  0.00
ATOM    153  CB  GLU    30      10.368   0.569  -6.788  1.00  0.00
ATOM    154  CG  GLU    30      11.628  -0.168  -7.214  1.00  0.00
ATOM    155  CD  GLU    30      11.917  -0.021  -8.694  1.00  0.00
ATOM    156  OE1 GLU    30      11.124   0.647  -9.391  1.00  0.00
ATOM    157  OE2 GLU    30      12.937  -0.573  -9.158  1.00  0.00
ATOM    158  O   GLU    30       7.724   0.275  -5.143  1.00  0.00
ATOM    159  C   GLU    30       7.964   0.535  -6.325  1.00  0.00
ATOM    160  N   TYR    31       7.283   1.444  -7.011  1.00  0.00
ATOM    161  CA  TYR    31       6.195   2.160  -6.374  1.00  0.00
ATOM    162  CB  TYR    31       5.715   3.308  -7.265  1.00  0.00
ATOM    163  CG  TYR    31       4.577   4.109  -6.672  1.00  0.00
ATOM    164  CD1 TYR    31       4.814   5.047  -5.675  1.00  0.00
ATOM    165  CD2 TYR    31       3.274   3.923  -7.110  1.00  0.00
ATOM    166  CE1 TYR    31       3.780   5.784  -5.127  1.00  0.00
ATOM    167  CE2 TYR    31       2.228   4.652  -6.574  1.00  0.00
ATOM    168  CZ  TYR    31       2.492   5.586  -5.575  1.00  0.00
ATOM    169  OH  TYR    31       1.462   6.319  -5.031  1.00  0.00
ATOM    170  O   TYR    31       4.468   1.162  -5.021  1.00  0.00
ATOM    171  C   TYR    31       5.029   1.199  -6.127  1.00  0.00
ATOM    172  N   HIS    32       4.722   0.362  -7.122  1.00  0.00
ATOM    173  CA  HIS    32       3.656  -0.624  -6.963  1.00  0.00
ATOM    174  CB  HIS    32       3.466  -1.420  -8.254  1.00  0.00
ATOM    175  CG  HIS    32       2.385  -2.454  -8.174  1.00  0.00
ATOM    176  CD2 HIS    32       2.341  -3.907  -8.107  1.00  0.00
ATOM    177  ND1 HIS    32       1.046  -2.129  -8.148  1.00  0.00
ATOM    178  CE1 HIS    32       0.323  -3.260  -8.073  1.00  0.00
ATOM    179  NE2 HIS    32       1.092  -4.330  -8.049  1.00  0.00
ATOM    180  O   HIS    32       3.205  -1.919  -4.972  1.00  0.00
ATOM    181  C   HIS    32       4.037  -1.583  -5.825  1.00  0.00
ATOM    182  N   HIS    33       5.298  -2.015  -5.824  1.00  0.00
ATOM    183  CA  HIS    33       5.803  -2.924  -4.803  1.00  0.00
ATOM    184  CB  HIS    33       7.276  -3.250  -5.059  1.00  0.00
ATOM    185  CG  HIS    33       7.501  -4.145  -6.237  1.00  0.00
ATOM    186  CD2 HIS    33       8.173  -4.019  -7.523  1.00  0.00
ATOM    187  ND1 HIS    33       7.027  -5.437  -6.293  1.00  0.00
ATOM    188  CE1 HIS    33       7.384  -5.985  -7.468  1.00  0.00
ATOM    189  NE2 HIS    33       8.071  -5.140  -8.211  1.00  0.00
ATOM    190  O   HIS    33       5.380  -3.063  -2.443  1.00  0.00
ATOM    191  C   HIS    33       5.701  -2.335  -3.399  1.00  0.00
ATOM    192  N   ALA    34       5.975  -1.032  -3.271  1.00  0.00
ATOM    193  CA  ALA    34       5.877  -0.362  -1.974  1.00  0.00
ATOM    194  CB  ALA    34       6.336   1.084  -2.089  1.00  0.00
ATOM    195  O   ALA    34       4.135  -0.796  -0.380  1.00  0.00
ATOM    196  C   ALA    34       4.426  -0.399  -1.515  1.00  0.00
ATOM    197  N   TYR    35       3.522   0.023  -2.398  1.00  0.00
ATOM    198  CA  TYR    35       2.089   0.045  -2.095  1.00  0.00
ATOM    199  CB  TYR    35       1.292   0.512  -3.315  1.00  0.00
ATOM    200  CG  TYR    35      -0.205   0.525  -3.099  1.00  0.00
ATOM    201  CD1 TYR    35      -0.816   1.568  -2.413  1.00  0.00
ATOM    202  CD2 TYR    35      -1.002  -0.505  -3.581  1.00  0.00
ATOM    203  CE1 TYR    35      -2.183   1.587  -2.211  1.00  0.00
ATOM    204  CE2 TYR    35      -2.370  -0.501  -3.389  1.00  0.00
ATOM    205  CZ  TYR    35      -2.958   0.556  -2.697  1.00  0.00
ATOM    206  OH  TYR    35      -4.320   0.575  -2.498  1.00  0.00
ATOM    207  O   TYR    35       0.883  -1.516  -0.721  1.00  0.00
ATOM    208  C   TYR    35       1.601  -1.340  -1.708  1.00  0.00
ATOM    209  N   LYS    36       2.025  -2.329  -2.484  1.00  0.00
ATOM    210  CA  LYS    36       1.630  -3.702  -2.239  1.00  0.00
ATOM    211  CB  LYS    36       2.236  -4.631  -3.294  1.00  0.00
ATOM    212  CG  LYS    36       1.837  -6.088  -3.141  1.00  0.00
ATOM    213  CD  LYS    36       2.407  -6.939  -4.265  1.00  0.00
ATOM    214  CE  LYS    36       2.034  -8.402  -4.097  1.00  0.00
ATOM    215  NZ  LYS    36       2.599  -9.249  -5.182  1.00  0.00
ATOM    216  O   LYS    36       1.313  -4.858  -0.149  1.00  0.00
ATOM    217  C   LYS    36       2.088  -4.217  -0.865  1.00  0.00
ATOM    218  N   ALA    37       3.342  -3.934  -0.507  1.00  0.00
ATOM    219  CA  ALA    37       3.890  -4.347   0.782  1.00  0.00
ATOM    220  CB  ALA    37       5.345  -3.920   0.902  1.00  0.00
ATOM    221  O   ALA    37       2.633  -4.417   2.864  1.00  0.00
ATOM    222  C   ALA    37       3.111  -3.718   1.951  1.00  0.00
ATOM    223  N   ILE    38       2.993  -2.390   1.915  1.00  0.00
ATOM    224  CA  ILE    38       2.299  -1.636   2.958  1.00  0.00
ATOM    225  CB  ILE    38       2.227  -0.137   2.616  1.00  0.00
ATOM    226  CG1 ILE    38       3.624   0.487   2.653  1.00  0.00
ATOM    227  CG2 ILE    38       1.347   0.596   3.617  1.00  0.00
ATOM    228  CD1 ILE    38       3.686   1.882   2.071  1.00  0.00
ATOM    229  O   ILE    38       0.408  -2.329   4.282  1.00  0.00
ATOM    230  C   ILE    38       0.867  -2.126   3.151  1.00  0.00
ATOM    231  N   GLN    39       0.167  -2.319   2.039  1.00  0.00
ATOM    232  CA  GLN    39      -1.214  -2.779   2.070  1.00  0.00
ATOM    233  CB  GLN    39      -1.787  -2.850   0.654  1.00  0.00
ATOM    234  CG  GLN    39      -3.274  -3.162   0.600  1.00  0.00
ATOM    235  CD  GLN    39      -4.116  -2.090   1.264  1.00  0.00
ATOM    236  OE1 GLN    39      -3.902  -0.897   1.050  1.00  0.00
ATOM    237  NE2 GLN    39      -5.081  -2.514   2.073  1.00  0.00
ATOM    238  O   GLN    39      -2.353  -4.435   3.364  1.00  0.00
ATOM    239  C   GLN    39      -1.361  -4.162   2.688  1.00  0.00
ATOM    240  N   LYS    40      -0.359  -5.012   2.501  1.00  0.00
ATOM    241  CA  LYS    40      -0.439  -6.373   3.002  1.00  0.00
ATOM    242  CB  LYS    40       0.299  -7.333   2.066  1.00  0.00
ATOM    243  CG  LYS    40      -0.319  -7.447   0.681  1.00  0.00
ATOM    244  CD  LYS    40       0.464  -8.409  -0.196  1.00  0.00
ATOM    245  CE  LYS    40      -0.122  -8.481  -1.597  1.00  0.00
ATOM    246  NZ  LYS    40       0.621  -9.442  -2.460  1.00  0.00
ATOM    247  O   LYS    40      -0.026  -7.849   4.837  1.00  0.00
ATOM    248  C   LYS    40       0.129  -6.718   4.376  1.00  0.00
ATOM    249  N   TYR    41       0.768  -5.765   5.043  1.00  0.00
ATOM    250  CA  TYR    41       1.320  -6.026   6.375  1.00  0.00
ATOM    251  CB  TYR    41       2.056  -4.791   6.901  1.00  0.00
ATOM    252  CG  TYR    41       3.315  -4.456   6.135  1.00  0.00
ATOM    253  CD1 TYR    41       3.898  -5.386   5.283  1.00  0.00
ATOM    254  CD2 TYR    41       3.918  -3.212   6.267  1.00  0.00
ATOM    255  CE1 TYR    41       5.050  -5.088   4.580  1.00  0.00
ATOM    256  CE2 TYR    41       5.070  -2.897   5.572  1.00  0.00
ATOM    257  CZ  TYR    41       5.634  -3.849   4.723  1.00  0.00
ATOM    258  OH  TYR    41       6.781  -3.549   4.023  1.00  0.00
ATOM    259  O   TYR    41      -0.903  -5.921   7.300  1.00  0.00
ATOM    260  C   TYR    41       0.234  -6.383   7.393  1.00  0.00
ATOM    264  N   THR    44       0.588  -7.207   8.366  1.00  0.00
ATOM    265  CA  THR    44      -0.359  -7.583   9.401  1.00  0.00
ATOM    266  CB  THR    44       0.068  -8.881  10.112  1.00  0.00
ATOM    267  CG2 THR    44       0.213 -10.015   9.110  1.00  0.00
ATOM    268  OG1 THR    44       1.327  -8.678  10.768  1.00  0.00
ATOM    269  O   THR    44       0.523  -5.658  10.531  1.00  0.00
ATOM    270  C   THR    44      -0.417  -6.447  10.420  1.00  0.00
ATOM    271  N   SER    45      -1.488  -6.412  11.207  1.00  0.00
ATOM    272  CA  SER    45      -1.681  -5.386  12.224  1.00  0.00
ATOM    273  CB  SER    45      -2.816  -5.776  13.170  1.00  0.00
ATOM    274  OG  SER    45      -4.064  -5.783  12.496  1.00  0.00
ATOM    275  O   SER    45      -0.012  -3.977  13.234  1.00  0.00
ATOM    276  C   SER    45      -0.455  -5.122  13.112  1.00  0.00
ATOM    277  N   GLY    46       0.092  -6.157  13.744  1.00  0.00
ATOM    278  CA  GLY    46       1.250  -5.941  14.604  1.00  0.00
ATOM    279  O   GLY    46       3.618  -6.258  14.689  1.00  0.00
ATOM    280  C   GLY    46       2.602  -6.254  13.996  1.00  0.00
ATOM    281  N   GLY    47       2.626  -6.419  12.683  1.00  0.00
ATOM    282  CA  GLY    47       3.861  -6.724  11.980  1.00  0.00
ATOM    283  O   GLY    47       4.524  -4.414  12.077  1.00  0.00
ATOM    284  C   GLY    47       4.884  -5.594  12.066  1.00  0.00
ATOM    285  N   PRO    48       6.156  -5.966  12.170  1.00  0.00
ATOM    286  CA  PRO    48       7.248  -5.005  12.211  1.00  0.00
ATOM    287  CB  PRO    48       8.298  -5.676  13.099  1.00  0.00
ATOM    288  CG  PRO    48       8.089  -7.137  12.885  1.00  0.00
ATOM    289  CD  PRO    48       6.623  -7.311  12.599  1.00  0.00
ATOM    290  O   PRO    48       8.078  -5.787  10.122  1.00  0.00
ATOM    291  C   PRO    48       7.688  -4.828  10.778  1.00  0.00
ATOM    292  N   THR    49       7.588  -3.604  10.255  1.00  0.00
ATOM    293  CA  THR    49       7.992  -3.361   8.870  1.00  0.00
ATOM    294  CB  THR    49       7.726  -1.902   8.453  1.00  0.00
ATOM    295  CG2 THR    49       6.236  -1.599   8.494  1.00  0.00
ATOM    296  OG1 THR    49       8.405  -1.014   9.350  1.00  0.00
ATOM    297  O   THR    49      10.294  -3.512   9.526  1.00  0.00
ATOM    298  C   THR    49       9.464  -3.614   8.620  1.00  0.00
ATOM    299  N   ASP    50       9.774  -3.985   7.389  1.00  0.00
ATOM    300  CA  ASP    50      11.147  -4.221   6.977  1.00  0.00
ATOM    301  CB  ASP    50      11.224  -5.423   6.035  1.00  0.00
ATOM    302  CG  ASP    50      12.652  -5.820   5.714  1.00  0.00
ATOM    303  OD1 ASP    50      13.581  -5.144   6.201  1.00  0.00
ATOM    304  OD2 ASP    50      12.841  -6.809   4.973  1.00  0.00
ATOM    305  O   ASP    50      11.491  -2.799   5.041  1.00  0.00
ATOM    306  C   ASP    50      11.542  -2.921   6.276  1.00  0.00
ATOM    307  N   TRP    51      11.919  -1.943   7.091  1.00  0.00
ATOM    308  CA  TRP    51      12.296  -0.626   6.595  1.00  0.00
ATOM    309  CB  TRP    51      12.762   0.267   7.746  1.00  0.00
ATOM    310  CG  TRP    51      13.174   1.640   7.311  1.00  0.00
ATOM    311  CD1 TRP    51      14.446   2.135   7.252  1.00  0.00
ATOM    312  CD2 TRP    51      12.310   2.697   6.874  1.00  0.00
ATOM    313  CE2 TRP    51      13.128   3.803   6.566  1.00  0.00
ATOM    314  CE3 TRP    51      10.927   2.816   6.713  1.00  0.00
ATOM    315  NE1 TRP    51      14.428   3.434   6.806  1.00  0.00
ATOM    316  CZ2 TRP    51      12.608   5.012   6.107  1.00  0.00
ATOM    317  CZ3 TRP    51      10.416   4.017   6.257  1.00  0.00
ATOM    318  CH2 TRP    51      11.251   5.100   5.959  1.00  0.00
ATOM    319  O   TRP    51      13.403   0.083   4.600  1.00  0.00
ATOM    320  C   TRP    51      13.423  -0.667   5.581  1.00  0.00
ATOM    321  N   GLN    52      14.384  -1.565   5.795  1.00  0.00
ATOM    322  CA  GLN    52      15.527  -1.694   4.897  1.00  0.00
ATOM    323  CB  GLN    52      16.494  -2.763   5.410  1.00  0.00
ATOM    324  CG  GLN    52      17.250  -2.363   6.666  1.00  0.00
ATOM    325  CD  GLN    52      18.112  -3.485   7.210  1.00  0.00
ATOM    326  OE1 GLN    52      18.082  -4.605   6.701  1.00  0.00
ATOM    327  NE2 GLN    52      18.884  -3.187   8.248  1.00  0.00
ATOM    328  O   GLN    52      15.567  -1.544   2.509  1.00  0.00
ATOM    329  C   GLN    52      15.081  -2.092   3.505  1.00  0.00
ATOM    330  N   ASP    53      14.124  -3.015   3.432  1.00  0.00
ATOM    331  CA  ASP    53      13.602  -3.462   2.143  1.00  0.00
ATOM    332  CB  ASP    53      12.516  -4.521   2.344  1.00  0.00
ATOM    333  CG  ASP    53      11.989  -5.070   1.032  1.00  0.00
ATOM    334  OD1 ASP    53      12.787  -5.657   0.271  1.00  0.00
ATOM    335  OD2 ASP    53      10.780  -4.913   0.767  1.00  0.00
ATOM    336  O   ASP    53      13.309  -2.035   0.225  1.00  0.00
ATOM    337  C   ASP    53      13.005  -2.267   1.405  1.00  0.00
ATOM    338  N   THR    54      12.184  -1.496   2.119  1.00  0.00
ATOM    339  CA  THR    54      11.521  -0.320   1.558  1.00  0.00
ATOM    340  CB  THR    54      10.610   0.363   2.595  1.00  0.00
ATOM    341  CG2 THR    54       9.964   1.606   1.999  1.00  0.00
ATOM    342  OG1 THR    54       9.579  -0.544   3.002  1.00  0.00
ATOM    343  O   THR    54      12.400   1.240  -0.048  1.00  0.00
ATOM    344  C   THR    54      12.517   0.735   1.076  1.00  0.00
ATOM    345  N   LYS    55      13.527   1.022   1.895  1.00  0.00
ATOM    346  CA  LYS    55      14.546   1.997   1.519  1.00  0.00
ATOM    347  CB  LYS    55      15.591   2.132   2.629  1.00  0.00
ATOM    348  CG  LYS    55      16.671   3.164   2.341  1.00  0.00
ATOM    349  CD  LYS    55      17.628   3.303   3.515  1.00  0.00
ATOM    350  CE  LYS    55      18.723   4.313   3.217  1.00  0.00
ATOM    351  NZ  LYS    55      19.676   4.450   4.352  1.00  0.00
ATOM    352  O   LYS    55      15.549   2.351  -0.639  1.00  0.00
ATOM    353  C   LYS    55      15.235   1.539   0.242  1.00  0.00
ATOM    354  N   ARG    56      15.428   0.222   0.138  1.00  0.00
ATOM    355  CA  ARG    56      16.072  -0.371  -1.023  1.00  0.00
ATOM    356  CB  ARG    56      16.201  -1.886  -0.848  1.00  0.00
ATOM    357  CG  ARG    56      17.225  -2.306   0.193  1.00  0.00
ATOM    358  CD  ARG    56      17.249  -3.816   0.367  1.00  0.00
ATOM    359  NE  ARG    56      18.208  -4.235   1.387  1.00  0.00
ATOM    360  CZ  ARG    56      18.373  -5.492   1.784  1.00  0.00
ATOM    361  NH1 ARG    56      19.271  -5.778   2.718  1.00  0.00
ATOM    362  NH2 ARG    56      17.642  -6.460   1.248  1.00  0.00
ATOM    363  O   ARG    56      15.936   0.088  -3.360  1.00  0.00
ATOM    364  C   ARG    56      15.324  -0.145  -2.316  1.00  0.00
ATOM    365  N   ILE    57      13.997  -0.215  -2.256  1.00  0.00
ATOM    366  CA  ILE    57      13.170   0.009  -3.436  1.00  0.00
ATOM    367  CB  ILE    57      11.671   0.001  -3.083  1.00  0.00
ATOM    368  CG1 ILE    57      11.231  -1.403  -2.660  1.00  0.00
ATOM    369  CG2 ILE    57      10.839   0.423  -4.284  1.00  0.00
ATOM    370  CD1 ILE    57       9.853  -1.449  -2.040  1.00  0.00
ATOM    371  O   ILE    57      13.773   1.459  -5.265  1.00  0.00
ATOM    372  C   ILE    57      13.503   1.363  -4.059  1.00  0.00
ATOM    373  N   PHE    58      13.549   2.393  -3.215  1.00  0.00
ATOM    374  CA  PHE    58      13.838   3.756  -3.658  1.00  0.00
ATOM    375  CB  PHE    58      13.640   4.746  -2.509  1.00  0.00
ATOM    376  CG  PHE    58      12.199   5.027  -2.193  1.00  0.00
ATOM    377  CD1 PHE    58      11.589   4.442  -1.097  1.00  0.00
ATOM    378  CD2 PHE    58      11.453   5.878  -2.990  1.00  0.00
ATOM    379  CE1 PHE    58      10.262   4.699  -0.807  1.00  0.00
ATOM    380  CE2 PHE    58      10.127   6.135  -2.699  1.00  0.00
ATOM    381  CZ  PHE    58       9.531   5.550  -1.614  1.00  0.00
ATOM    382  O   PHE    58      15.504   4.718  -5.087  1.00  0.00
ATOM    383  C   PHE    58      15.258   3.941  -4.157  1.00  0.00
ATOM    384  N   GLY    59      16.196   3.216  -3.560  1.00  0.00
ATOM    385  CA  GLY    59      17.568   3.285  -4.030  1.00  0.00
ATOM    386  O   GLY    59      18.340   3.203  -6.301  1.00  0.00
ATOM    387  C   GLY    59      17.631   2.684  -5.437  1.00  0.00
ATOM    388  N   GLY    60      16.847   1.630  -5.677  1.00  0.00
ATOM    389  CA  GLY    60      16.793   0.963  -6.983  1.00  0.00
ATOM    390  O   GLY    60      16.787   1.966  -9.173  1.00  0.00
ATOM    391  C   GLY    60      16.282   1.928  -8.043  1.00  0.00
ATOM    392  N   ILE    61      15.260   2.692  -7.667  1.00  0.00
ATOM    393  CA  ILE    61      14.665   3.689  -8.551  1.00  0.00
ATOM    394  CB  ILE    61      13.554   4.483  -7.839  1.00  0.00
ATOM    395  CG1 ILE    61      12.360   3.576  -7.537  1.00  0.00
ATOM    396  CG2 ILE    61      13.078   5.633  -8.713  1.00  0.00
ATOM    397  CD1 ILE    61      11.342   4.197  -6.606  1.00  0.00
ATOM    398  O   ILE    61      15.865   4.973 -10.208  1.00  0.00
ATOM    399  C   ILE    61      15.747   4.674  -9.013  1.00  0.00
ATOM    400  N   LEU    62      16.549   5.155  -8.066  1.00  0.00
ATOM    401  CA  LEU    62      17.618   6.101  -8.371  1.00  0.00
ATOM    402  CB  LEU    62      18.297   6.576  -7.086  1.00  0.00
ATOM    403  CG  LEU    62      17.465   7.480  -6.173  1.00  0.00
ATOM    404  CD1 LEU    62      18.187   7.725  -4.858  1.00  0.00
ATOM    405  CD2 LEU    62      17.211   8.825  -6.835  1.00  0.00
ATOM    406  O   LEU    62      19.134   6.085 -10.237  1.00  0.00
ATOM    407  C   LEU    62      18.684   5.471  -9.261  1.00  0.00
ATOM    408  N   ASP    63      19.047   4.227  -8.951  1.00  0.00
ATOM    409  CA  ASP    63      20.043   3.497  -9.730  1.00  0.00
ATOM    410  CB  ASP    63      20.199   2.070  -9.199  1.00  0.00
ATOM    411  CG  ASP    63      21.383   1.347  -9.809  1.00  0.00
ATOM    412  OD1 ASP    63      22.154   1.991 -10.553  1.00  0.00
ATOM    413  OD2 ASP    63      21.539   0.137  -9.546  1.00  0.00
ATOM    414  O   ASP    63      20.442   3.699 -12.081  1.00  0.00
ATOM    415  C   ASP    63      19.643   3.417 -11.189  1.00  0.00
TER
END



