
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  144 (  144),  selected  144 , name T0370TS393_2-D1
# Molecule2: number of CA atoms  144 ( 1104),  selected  144 , name T0370_D1.pdb
# PARAMETERS: T0370TS393_2-D1.T0370_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    22         8 - 29          4.90    21.97
  LONGEST_CONTINUOUS_SEGMENT:    22        89 - 110         4.88    20.42
  LCS_AVERAGE:     13.01

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    15         8 - 22          1.77    31.24
  LCS_AVERAGE:      5.21

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    14         8 - 21          0.35    31.17
  LCS_AVERAGE:      3.49

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  144
LCS_GDT     T       8     T       8     14   15   22     8   14   14   14   14   14   14   15   18   25   28   30   33   35   37   40   42   45   50   56 
LCS_GDT     A       9     A       9     14   15   22    13   14   14   14   14   14   22   22   24   25   28   30   33   35   37   41   44   48   52   57 
LCS_GDT     K      10     K      10     14   15   22    13   14   14   14   14   14   14   14   15   18   22   25   29   34   37   41   43   46   52   57 
LCS_GDT     Q      11     Q      11     14   15   22    13   14   14   14   14   14   14   14   18   22   28   30   33   35   37   41   43   46   52   57 
LCS_GDT     R      12     R      12     14   15   22    13   14   14   14   14   15   22   22   24   25   28   30   33   35   37   42   45   48   52   57 
LCS_GDT     I      13     I      13     14   15   22    13   14   14   14   14   14   22   22   24   25   28   30   33   35   37   42   45   48   52   57 
LCS_GDT     Q      14     Q      14     14   15   22    13   14   14   14   14   14   14   16   24   25   28   30   33   35   37   41   44   48   52   57 
LCS_GDT     D      15     D      15     14   15   22    13   14   14   14   14   15   22   22   24   25   28   30   33   35   37   42   45   48   52   57 
LCS_GDT     T      16     T      16     14   15   22    13   14   14   14   14   14   22   22   24   25   28   30   33   35   37   42   45   48   52   57 
LCS_GDT     L      17     L      17     14   15   22    13   14   14   14   14   14   22   22   24   25   28   30   33   35   37   42   45   48   52   57 
LCS_GDT     N      18     N      18     14   15   22    13   14   14   14   14   15   22   22   24   25   28   30   33   35   37   42   45   48   52   57 
LCS_GDT     R      19     R      19     14   15   22    13   14   14   14   14   14   14   16   21   24   28   30   33   35   37   42   45   48   52   57 
LCS_GDT     L      20     L      20     14   15   22    13   14   14   14   14   14   14   14   15   18   24   30   32   35   37   40   44   48   52   57 
LCS_GDT     E      21     E      21     14   15   22    13   14   14   14   14   15   22   22   24   25   28   30   33   35   37   40   42   44   52   57 
LCS_GDT     L      22     L      22      4   15   22     3    3    4    6   11   14   22   22   24   25   28   30   33   35   37   40   42   44   51   57 
LCS_GDT     D      23     D      23      4    6   22     3    3    5    6   12   15   22   22   24   25   28   30   33   35   37   40   42   44   51   55 
LCS_GDT     V      24     V      24      3    6   22     3    3    4    6    7    9   11   16   18   21   23   25   29   35   37   40   42   44   51   55 
LCS_GDT     D      25     D      25      3    6   22     3    3    4    6    6   10   13   18   18   22   25   30   33   35   37   40   42   44   48   54 
LCS_GDT     A      26     A      26      3    5   22     3    5    7   10   12   15   22   22   24   25   28   30   33   35   37   40   42   48   52   57 
LCS_GDT     W      27     W      27      3    3   22     3    4    6    6    8   12   13   13   17   20   23   26   30   34   37   42   45   48   52   57 
LCS_GDT     V      28     V      28      3    3   22     3    3    3    3    4    6    8    9   13   16   22   24   28   29   37   41   44   48   52   57 
LCS_GDT     S      29     S      29      3    3   22     0    3    4    4    4    6    8   11   13   18   22   26   30   34   37   42   45   48   55   59 
LCS_GDT     T      30     T      30      3    4   17     0    3    3    7   10   10   12   13   15   18   22   24   27   31   37   42   45   53   58   65 
LCS_GDT     A      31     A      31      3    6   17     3    3    4    7   10   10   12   13   15   16   20   22   26   29   32   37   43   52   58   64 
LCS_GDT     G      32     G      32      3    6   17     3    3    4    6   10   10   12   13   15   15   20   21   25   29   32   37   43   52   58   64 
LCS_GDT     A      33     A      33      3    6   17     3    3    4    5    6    7    9   12   13   17   21   23   25   31   34   40   47   53   58   65 
LCS_GDT     D      34     D      34      3    7   17     3    3    4    5    6    7   10   12   18   22   23   25   27   30   34   39   47   53   58   65 
LCS_GDT     G      35     G      35      3    7   17     1    3    4    5    6   10   15   17   18   22   23   25   27   31   37   41   47   53   58   65 
LCS_GDT     G      36     G      36      4    7   17     4    4    4    5    6    9   12   17   18   22   23   25   27   29   32   38   44   53   58   65 
LCS_GDT     A      37     A      37      4    7   17     4    4    4    5    6    7   10   12   16   20   23   25   27   29   32   37   44   52   58   65 
LCS_GDT     P      38     P      38      4    7   17     4    4    4    5    6    9   15   17   18   22   23   25   27   29   33   38   46   53   58   65 
LCS_GDT     Y      39     Y      39      4    7   17     4    4    5    5    6    9   15   17   18   22   23   25   27   29   32   41   45   52   58   65 
LCS_GDT     L      40     L      40      4    7   17     3    4    5    5    6    9    9   11   12   20   22   24   27   32   34   42   45   52   58   65 
LCS_GDT     V      41     V      41      4    5   17     3    4    5    5    6    9    9   10   15   18   20   24   26   32   37   42   45   47   52   57 
LCS_GDT     P      42     P      42      4    5   17     3    4    5    5    6    9   12   12   15   18   22   24   26   32   37   42   45   48   52   57 
LCS_GDT     L      43     L      43      4    7   18     3    3    5    8   10   11   13   15   17   18   22   24   30   34   37   42   45   48   52   59 
LCS_GDT     S      44     S      44      5    7   18     3    5    6    9   12   12   13   15   17   18   22   24   30   34   37   42   45   48   52   59 
LCS_GDT     Y      45     Y      45      5    7   18     4    5    5    8   12   12   13   15   17   18   22   24   27   32   37   42   45   52   58   65 
LCS_GDT     L      46     L      46      5    7   18     4    5    5    7    7    8   10   13   15   18   20   24   29   32   35   42   45   52   58   65 
LCS_GDT     W      47     W      47      5    7   18     4    5    5    7    7    7   10   12   16   20   21   24   27   32   38   42   48   53   58   65 
LCS_GDT     D      48     D      48      5    7   18     4    5    5    7    7    7   10   12   13   15   18   23   26   30   34   39   43   50   58   64 
LCS_GDT     G      49     G      49      4    7   18     3    3    5    7    7    9   12   13   15   18   21   24   28   31   33   39   44   50   58   64 
LCS_GDT     E      50     E      50      5    7   18     3    4    6    6   10   12   12   15   17   21   23   25   28   31   33   39   44   48   58   64 
LCS_GDT     T      51     T      51      5    7   18     3    4    6    8   10   12   13   15   17   21   23   28   32   35   37   40   47   52   58   65 
LCS_GDT     F      52     F      52      5    7   19     3    3    6    7   10   11   13   17   19   21   23   29   33   35   38   44   48   53   58   65 
LCS_GDT     L      53     L      53      5    7   19     3    4    7   10   12   15   22   22   24   25   28   30   33   35   38   44   48   53   58   65 
LCS_GDT     V      54     V      54      5    7   19     3    4    6   10   12   15   22   22   24   25   28   30   33   35   38   44   48   53   58   65 
LCS_GDT     A      55     A      55      3    7   19     3    3    5    6   10   15   22   22   24   25   28   30   33   35   37   41   44   48   56   62 
LCS_GDT     T      56     T      56      3    7   19     3    3    4    5   12   15   22   22   24   25   28   30   33   35   37   42   45   48   53   59 
LCS_GDT     P      57     P      57      4    7   19     3    4    4    5    9   11   13   18   23   24   28   30   33   35   37   42   45   48   53   59 
LCS_GDT     A      58     A      58      4    7   19     3    4    5   10   12   15   22   22   24   25   28   30   33   35   37   42   45   48   52   57 
LCS_GDT     A      59     A      59      4    7   20     3    4    5   10   12   15   22   22   24   25   28   30   33   35   37   42   45   48   53   57 
LCS_GDT     S      60     S      60      4    7   20     3    4    6   10   12   15   22   22   24   25   28   30   33   35   38   44   48   53   58   65 
LCS_GDT     P      61     P      61      4    6   20     3    3    4    5    7    9   12   14   18   25   27   30   33   35   38   44   48   53   58   64 
LCS_GDT     T      62     T      62      4    6   20     3    3    4    5    6    7    8    9   12   13   15   18   20   25   37   40   42   44   50   59 
LCS_GDT     G      63     G      63      4    5   20     3    3    4    5    5    5    6    8   12   14   18   23   30   34   37   40   42   49   53   59 
LCS_GDT     R      64     R      64      4    5   20     3    3    4    5    7   10   22   22   24   25   28   30   33   35   38   44   48   51   58   64 
LCS_GDT     N      65     N      65      3    5   20     4    5    7   10   12   15   22   22   24   25   28   30   33   35   38   43   48   51   58   64 
LCS_GDT     L      66     L      66      3    5   20     4    4    4    4    9   14   22   22   24   25   28   30   33   35   38   44   48   53   58   64 
LCS_GDT     S      67     S      67      3    5   20     4    4    4    5    9    9   15   17   18   22   24   26   30   35   38   44   48   51   58   64 
LCS_GDT     E      68     E      68      3    7   20     3    3    4    5    7   12   15   17   18   22   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     T      69     T      69      3    7   20     3    3    4    5    7   12   15   17   18   22   23   25   29   35   38   44   48   53   58   65 
LCS_GDT     G      70     G      70      3    7   20     3    3    4    6    7   12   15   17   18   22   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     R      71     R      71      4    7   20     3    4    4    7    8   12   15   17   18   22   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     V      72     V      72      4    8   20     3    4    5    7    8   12   15   17   18   22   23   25   28   35   38   44   48   53   58   65 
LCS_GDT     R      73     R      73      6    8   20     4    4    6    7    7   12   15   17   18   22   23   25   27   29   34   42   47   53   58   65 
LCS_GDT     L      74     L      74      6    8   20     4    4    6    7    8   12   15   17   18   22   23   25   27   29   33   40   47   53   58   65 
LCS_GDT     G      75     G      75      6    8   20     4    4    6    7    7   12   15   17   18   22   23   25   27   29   33   40   44   49   58   65 
LCS_GDT     I      76     I      76      6    8   20     4    4    6    7    7   12   15   17   18   22   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     G      77     G      77      6    8   20     3    4    6    7    7   10   13   15   18   22   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     P      78     P      78      6    8   20     3    4    6    7    7    9   13   15   18   22   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     T      79     T      79      4    8   17     3    4    5    7    7    9   10   11   13   15   16   23   25   29   30   33   35   40   47   51 
LCS_GDT     R      80     R      80      3    6   17     3    3    4    6    6    7    8   11   13   15   15   17   18   22   25   33   35   36   40   46 
LCS_GDT     D      81     D      81      3    6   17     3    3    5    6    6    7    9   11   13   15   15   17   25   26   26   28   35   36   38   42 
LCS_GDT     L      82     L      82      4    6   17     3    3    5    6    6    7   10   11   13   15   15   19   25   26   27   33   35   36   41   47 
LCS_GDT     V      83     V      83      4    6   20     3    3    5    6    6    7   10   11   13   15   17   21   26   29   30   33   35   37   41   49 
LCS_GDT     L      84     L      84      4    6   20     3    3    5    6    6    7   10   11   13   15   16   18   25   29   30   36   40   43   48   53 
LCS_GDT     V      85     V      85      4    7   20     3    3    5    6    7    9   12   13   16   20   26   30   33   35   37   42   45   48   52   57 
LCS_GDT     E      86     E      86      5    9   20     3    4    7    8    9   11   12   13   18   22   26   30   33   35   37   42   45   48   52   57 
LCS_GDT     G      87     G      87      6    9   20     3    5    7    8    9   11   15   17   18   22   23   26   32   35   36   42   45   48   52   62 
LCS_GDT     T      88     T      88      6    9   20     2    3    7    8    9   11   12   13   14   16   17   18   23   27   31   34   40   50   58   65 
LCS_GDT     A      89     A      89      6    9   22     4    5    7    8    9   11   12   13   14   18   23   25   27   29   32   35   43   52   58   64 
LCS_GDT     L      90     L      90      6    9   22     4    5    7    8    9   11   12   14   17   21   23   25   27   29   31   35   40   48   56   59 
LCS_GDT     P      91     P      91      6    9   22     4    5    7    8    9   11   12   14   17   21   23   25   27   29   31   34   38   42   47   52 
LCS_GDT     L      92     L      92      6    9   22     4    5    7    8   10   12   13   15   17   19   23   25   27   28   30   33   38   42   47   50 
LCS_GDT     E      93     E      93      5    9   22     3    5    7    9   12   12   13   15   17   19   22   23   27   28   30   32   33   36   41   46 
LCS_GDT     P      94     P      94      4    9   22     3    4    4    8   12   12   13   14   17   19   22   23   27   28   30   32   37   37   41   46 
LCS_GDT     A      95     A      95      4    5   22     3    4    6    9   12   12   13   15   17   21   23   25   27   28   30   33   38   42   47   50 
LCS_GDT     G      96     G      96      3    5   22     3    3    3    5    5    9   13   14   17   21   23   25   27   29   31   34   38   42   47   52 
LCS_GDT     L      97     L      97      3    6   22     3    3    5    9   12   12   13   15   17   21   23   25   27   29   31   35   40   44   50   57 
LCS_GDT     P      98     P      98      3    6   22     3    3    6    9   12   12   13   15   17   21   23   25   27   29   31   36   40   46   51   57 
LCS_GDT     D      99     D      99      4    6   22     3    4    6    9   12   12   13   15   17   21   23   25   27   32   35   42   45   48   52   57 
LCS_GDT     G     100     G     100      4    6   22     3    4    5    9   12   12   13   15   17   21   23   26   30   34   37   42   45   52   58   65 
LCS_GDT     V     101     V     101      4    6   22     3    4    5    9   12   12   13   15   17   21   23   26   30   34   37   42   47   53   58   65 
LCS_GDT     G     102     G     102      4    6   22     3    3    5    9   12   12   13   15   17   21   23   25   30   34   38   42   48   53   58   65 
LCS_GDT     D     103     D     103      4    4   22     3    3    4    5    6    6    9   15   15   20   21   26   30   34   35   40   44   52   58   65 
LCS_GDT     T     104     T     104      4    4   22     3    3    4    7    9    9   11   15   16   20   22   26   30   34   38   44   48   53   58   65 
LCS_GDT     F     105     F     105      4    4   22     0    3    6    9   12   12   13   15   17   21   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     A     106     A     106      3    4   22     0    3    5    6    8   11   13   15   17   21   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     E     107     E     107      3    4   22     3    3    5    6   10   12   13   15   17   21   23   25   27   32   38   44   48   53   58   65 
LCS_GDT     K     108     K     108      3    4   22     3    3    3    6    7    7   10   13   16   21   23   25   28   33   37   44   48   53   58   65 
LCS_GDT     T     109     T     109      3    4   22     3    3    4    6    7    8   13   15   18   19   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     G     110     G     110      3    6   22     3    3    5    7    9   12   13   15   18   19   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     F     111     F     111      4    6   17     4    4    5    7    8   12   13   15   18   19   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     D     112     D     112      4    6   17     4    4    4    7    8   12   13   15   18   19   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     P     113     P     113      4    6   17     4    4    4    6    8   10   13   15   18   19   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     R     114     R     114      4    6   17     4    4    5    7    8   10   13   15   18   19   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     R     115     R     115      4    6   17     3    3    4    5    5   10   11   14   15   17   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     L     116     L     116      4    6   17     3    3    4    6    8   10   11   14   17   20   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     T     117     T     117      4    6   17     3    3    4    6    6    7    7   12   16   20   21   25   30   34   38   44   48   53   58   65 
LCS_GDT     T     118     T     118      3    6   17     3    3    3    6    7    7    8   10   16   20   21   24   27   32   38   44   48   53   58   65 
LCS_GDT     S     119     S     119      3    6   17     3    3    4    6    7    7    8   10   11   13   17   19   25   31   33   39   44   52   58   65 
LCS_GDT     Y     120     Y     120      4    9   17     3    4    6    8    9   11   12   15   16   20   21   26   30   34   38   44   48   53   58   65 
LCS_GDT     L     121     L     121      4    9   17     3    4    7    8   10   11   12   15   17   20   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     Y     122     Y     122      4    9   17     3    4    5    8    9   11   12   15   17   18   22   26   30   35   38   44   48   53   58   65 
LCS_GDT     F     123     F     123      4    9   17     3    5    7   10   12   15   22   22   24   25   28   30   33   35   37   43   47   51   58   64 
LCS_GDT     R     124     R     124      4    9   17     3    4    7    8    9   11   12   17   24   25   28   30   33   35   37   41   44   48   52   57 
LCS_GDT     I     125     I     125      4    9   17     3    3    7    8    9   11   12   15   17   20   21   28   32   35   36   39   42   45   49   55 
LCS_GDT     S     126     S     126      4    9   17     3    3    7    8    9   11   12   12   13   17   17   22   27   29   32   36   38   41   46   49 
LCS_GDT     P     127     P     127      4    9   17     3    3    7    8    9   11   12   15   15   17   21   23   27   30   33   36   40   42   46   48 
LCS_GDT     R     128     R     128      3    9   14     3    3    4    5    8   11   12   12   13   14   17   21   26   29   32   36   38   41   46   48 
LCS_GDT     R     129     R     129      3    4   14     4    4    4    4    5    5    9   11   12   13   15   18   22   26   26   33   36   40   46   48 
LCS_GDT     V     130     V     130      3    4   14     0    3    5    7    7    8    9   12   13   14   17   25   28   31   33   35   40   47   50   58 
LCS_GDT     Q     131     Q     131      3    3   14     0    3    3    5    7    8    8    9   13   18   21   25   28   31   33   39   44   49   54   60 
LCS_GDT     A     132     A     132      3    3   14     0    3    5    6    7    9    9   11   12   16   17   22   28   33   36   40   47   52   58   64 
LCS_GDT     W     133     W     133      3    4   14     0    3    4    5    6    7    9   10   13   14   18   19   24   28   30   33   38   48   54   61 
LCS_GDT     R     134     R     134      3    8   14     1    3    4    5    5    6    9   10   11   13   18   19   24   28   30   36   41   48   58   65 
LCS_GDT     E     135     E     135      6    9   14     4    5    7    8    9    9    9   10   11   14   18   22   24   28   30   34   40   49   58   65 
LCS_GDT     A     136     A     136      6    9   14     4    5    7    8    9    9    9   10   10   12   18   22   23   25   27   31   32   36   41   50 
LCS_GDT     N     137     N     137      6    9   14     4    5    7    8    9    9    9   10   10   11   12   13   19   24   27   31   32   35   38   45 
LCS_GDT     E     138     E     138      6    9   14     4    5    7    8    9    9    9   10   13   14   18   22   24   28   32   39   47   53   58   65 
LCS_GDT     L     139     L     139      6    9   14     4    5    7    8    9    9    9   15   18   18   22   25   29   35   38   44   48   53   58   65 
LCS_GDT     S     140     S     140      6    9   14     4    5    7    8    9    9    9   10   10   11   14   22   24   27   30   38   41   50   58   65 
LCS_GDT     G     141     G     141      5    9   14     3    5    5    8    9    9    9   10   13   19   21   22   28   35   38   44   48   53   58   65 
LCS_GDT     R     142     R     142      5    9   14     4    5    7    8    9   10   11   14   17   20   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     E     143     E     143      3    9   14     3    3    4    6   10   10   12   14   17   20   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     L     144     L     144      3    7   14     3    3    4    4    6    7    9   14   16   20   21   26   30   35   38   44   48   53   58   65 
LCS_GDT     M     145     M     145      3    5   14     3    3    4    5    8    9   11   14   17   21   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     R     146     R     146      4    6   14     3    3    4    6    8   10   11   14   17   21   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     D     147     D     147      4    6   14     3    3    4    6    8    9   10   14   17   21   23   25   28   33   38   44   48   53   58   65 
LCS_GDT     G     148     G     148      4    6   14     4    4    5    6    8   10   11   14   16   20   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     E     149     E     149      4    6   14     4    4    5    5    7   10   13   15   18   19   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     W     150     W     150      4    6   14     4    4    5    5    6    9   13   15   18   19   23   26   30   35   38   44   48   53   58   65 
LCS_GDT     L     151     L     151      4    6   14     4    4    5    5    6    7    7    7   10   11   14   15   21   23   27   32   33   42   47   54 
LCS_AVERAGE  LCS_A:   7.24  (   3.49    5.21   13.01 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     13     14     14     14     14     15     22     22     24     25     28     30     33     35     38     44     48     53     58     65 
GDT PERCENT_CA   9.03   9.72   9.72   9.72   9.72  10.42  15.28  15.28  16.67  17.36  19.44  20.83  22.92  24.31  26.39  30.56  33.33  36.81  40.28  45.14
GDT RMS_LOCAL    0.23   0.35   0.35   0.35   0.35   2.01   2.64   2.64   2.92   3.04   3.43   3.61   3.95   4.18   5.44   5.92   6.19   6.94   6.89   7.60
GDT RMS_ALL_CA  30.90  31.17  31.17  31.17  31.17  21.18  21.08  21.08  21.18  21.13  21.21  21.12  21.21  21.28  15.12  15.01  15.02  14.71  15.08  14.75

#      Molecule1      Molecule2       DISTANCE
LGA    T       8      T       8          6.834
LGA    A       9      A       9          3.375
LGA    K      10      K      10          7.739
LGA    Q      11      Q      11          6.912
LGA    R      12      R      12          2.113
LGA    I      13      I      13          3.695
LGA    Q      14      Q      14          4.944
LGA    D      15      D      15          3.262
LGA    T      16      T      16          3.149
LGA    L      17      L      17          3.688
LGA    N      18      N      18          1.632
LGA    R      19      R      19          5.153
LGA    L      20      L      20          6.538
LGA    E      21      E      21          3.421
LGA    L      22      L      22          3.057
LGA    D      23      D      23          3.060
LGA    V      24      V      24          7.280
LGA    D      25      D      25          6.462
LGA    A      26      A      26          0.677
LGA    W      27      W      27          7.694
LGA    V      28      V      28         10.799
LGA    S      29      S      29         11.345
LGA    T      30      T      30         16.679
LGA    A      31      A      31         23.143
LGA    G      32      G      32         25.304
LGA    A      33      A      33         25.817
LGA    D      34      D      34         26.481
LGA    G      35      G      35         27.014
LGA    G      36      G      36         25.856
LGA    A      37      A      37         22.115
LGA    P      38      P      38         21.911
LGA    Y      39      Y      39         19.350
LGA    L      40      L      40         17.952
LGA    V      41      V      41         18.377
LGA    P      42      P      42         17.533
LGA    L      43      L      43         11.892
LGA    S      44      S      44         11.239
LGA    Y      45      Y      45         10.509
LGA    L      46      L      46          8.838
LGA    W      47      W      47         11.510
LGA    D      48      D      48         12.212
LGA    G      49      G      49         16.246
LGA    E      50      E      50         15.004
LGA    T      51      T      51         10.780
LGA    F      52      F      52          7.449
LGA    L      53      L      53          2.299
LGA    V      54      V      54          1.254
LGA    A      55      A      55          2.735
LGA    T      56      T      56          2.723
LGA    P      57      P      57          4.345
LGA    A      58      A      58          1.785
LGA    A      59      A      59          2.192
LGA    S      60      S      60          1.909
LGA    P      61      P      61          6.044
LGA    T      62      T      62          8.215
LGA    G      63      G      63          8.461
LGA    R      64      R      64          3.571
LGA    N      65      N      65          0.886
LGA    L      66      L      66          3.427
LGA    S      67      S      67          9.265
LGA    E      68      E      68         11.781
LGA    T      69      T      69         11.867
LGA    G      70      G      70         12.184
LGA    R      71      R      71         14.551
LGA    V      72      V      72         12.288
LGA    R      73      R      73         12.608
LGA    L      74      L      74         13.776
LGA    G      75      G      75         18.687
LGA    I      76      I      76         20.725
LGA    G      77      G      77         25.447
LGA    P      78      P      78         32.248
LGA    T      79      T      79         35.210
LGA    R      80      R      80         32.232
LGA    D      81      D      81         26.478
LGA    L      82      L      82         21.681
LGA    V      83      V      83         15.250
LGA    L      84      L      84         11.074
LGA    V      85      V      85          6.204
LGA    E      86      E      86          6.559
LGA    G      87      G      87          8.282
LGA    T      88      T      88         13.777
LGA    A      89      A      89         17.487
LGA    L      90      L      90         21.725
LGA    P      91      P      91         24.470
LGA    L      92      L      92         23.926
LGA    E      93      E      93         27.613
LGA    P      94      P      94         29.061
LGA    A      95      A      95         27.759
LGA    G      96      G      96         22.289
LGA    L      97      L      97         16.202
LGA    P      98      P      98         13.344
LGA    D      99      D      99         14.982
LGA    G     100      G     100         17.383
LGA    V     101      V     101         14.022
LGA    G     102      G     102         19.804
LGA    D     103      D     103         18.813
LGA    T     104      T     104         12.740
LGA    F     105      F     105         13.684
LGA    A     106      A     106         19.032
LGA    E     107      E     107         23.112
LGA    K     108      K     108         24.677
LGA    T     109      T     109         26.026
LGA    G     110      G     110         32.127
LGA    F     111      F     111         32.164
LGA    D     112      D     112         31.074
LGA    P     113      P     113         28.505
LGA    R     114      R     114         32.113
LGA    R     115      R     115         32.709
LGA    L     116      L     116         30.541
LGA    T     117      T     117         30.158
LGA    T     118      T     118         25.571
LGA    S     119      S     119         21.082
LGA    Y     120      Y     120         18.569
LGA    L     121      L     121         12.413
LGA    Y     122      Y     122          7.067
LGA    F     123      F     123          1.019
LGA    R     124      R     124          6.131
LGA    I     125      I     125          9.393
LGA    S     126      S     126         15.617
LGA    P     127      P     127         22.233
LGA    R     128      R     128         24.611
LGA    R     129      R     129         24.186
LGA    V     130      V     130         26.416
LGA    Q     131      Q     131         32.060
LGA    A     132      A     132         30.105
LGA    W     133      W     133         30.922
LGA    R     134      R     134         35.294
LGA    E     135      E     135         39.765
LGA    A     136      A     136         38.863
LGA    N     137      N     137         40.081
LGA    E     138      E     138         40.422
LGA    L     139      L     139         40.100
LGA    S     140      S     140         39.547
LGA    G     141      G     141         40.477
LGA    R     142      R     142         39.613
LGA    E     143      E     143         37.193
LGA    L     144      L     144         35.276
LGA    M     145      M     145         32.006
LGA    R     146      R     146         35.713
LGA    D     147      D     147         36.023
LGA    G     148      G     148         29.734
LGA    E     149      E     149         26.634
LGA    W     150      W     150         21.186
LGA    L     151      L     151         24.740

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  144  144    4.0     22    2.64    16.319    12.893     0.802

LGA_LOCAL      RMSD =  2.645  Number of atoms =   22  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 21.073  Number of atoms =  144 
Std_ALL_ATOMS  RMSD = 14.384  (standard rmsd on all 144 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.235774 * X  +   0.431786 * Y  +  -0.870616 * Z  +   3.618246
  Y_new =  -0.929184 * X  +   0.162247 * Y  +   0.332103 * Z  +  34.720829
  Z_new =   0.284652 * X  +   0.887264 * Y  +   0.362955 * Z  +  22.303091 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   1.182494   -1.959099  [ DEG:    67.7519   -112.2481 ]
  Theta =  -0.288644   -2.852949  [ DEG:   -16.5381   -163.4619 ]
  Phi   =  -1.819295    1.322298  [ DEG:  -104.2379     75.7621 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0370TS393_2-D1                               
REMARK     2: T0370_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0370TS393_2-D1.T0370_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  144  144   4.0   22   2.64  12.893    14.38
REMARK  ---------------------------------------------------------- 
MOLECULE T0370TS393_2-D1
PFRMAT TS
TARGET T0370
MODEL 2
PARENT N/A
ATOM      8  CA  THR     8      22.672  27.277  26.901  1.00 25.00           C
ATOM      9  CA  ALA     9      21.957  27.576  23.150  1.00 25.00           C
ATOM     10  CA  LYS    10      18.209  27.906  23.867  1.00 25.00           C
ATOM     11  CA  GLN    11      18.919  30.633  26.460  1.00 25.00           C
ATOM     12  CA  ARG    12      21.114  32.497  23.936  1.00 25.00           C
ATOM     13  CA  ILE    13      18.334  32.264  21.311  1.00 25.00           C
ATOM     14  CA  GLN    14      15.799  33.621  23.839  1.00 25.00           C
ATOM     15  CA  ASP    15      18.152  36.524  24.679  1.00 25.00           C
ATOM     16  CA  THR    16      18.564  37.300  20.951  1.00 25.00           C
ATOM     17  CA  LEU    17      14.760  37.269  20.499  1.00 25.00           C
ATOM     18  CA  ASN    18      14.363  39.645  23.476  1.00 25.00           C
ATOM     19  CA  ARG    19      16.997  41.992  21.986  1.00 25.00           C
ATOM     20  CA  LEU    20      15.173  41.941  18.619  1.00 25.00           C
ATOM     21  CA  GLU    21      11.866  42.753  20.371  1.00 25.00           C
ATOM     22  CA  LEU    22      10.146  39.574  19.302  1.00 25.00           C
ATOM     23  CA  ASP    23      12.304  38.617  16.341  1.00 25.00           C
ATOM     24  CA  VAL    24      10.591  35.298  16.886  1.00 25.00           C
ATOM     25  CA  ASP    25      10.095  33.360  13.621  1.00 25.00           C
ATOM     26  CA  ALA    26       6.491  34.635  13.382  1.00 25.00           C
ATOM     27  CA  TRP    27       7.699  38.225  13.952  1.00 25.00           C
ATOM     28  CA  VAL    28      10.342  37.797  11.215  1.00 25.00           C
ATOM     29  CA  SER    29       7.676  36.451   8.817  1.00 25.00           C
ATOM     30  CA  THR    30       5.418  39.440   9.609  1.00 25.00           C
ATOM     31  CA  ALA    31       8.414  41.545   8.455  1.00 25.00           C
ATOM     32  CA  GLY    32       9.806  39.757   5.332  1.00 25.00           C
ATOM     33  CA  ALA    33       7.262  37.361   3.732  1.00 25.00           C
ATOM     34  CA  ASP    34       3.752  38.257   4.984  1.00 25.00           C
ATOM     35  CA  GLY    35       0.638  40.379   5.309  1.00 25.00           C
ATOM     36  CA  GLY    36      -0.483  40.333   8.951  1.00 25.00           C
ATOM     37  CA  ALA    37      -0.551  38.830  12.471  1.00 25.00           C
ATOM     38  CA  PRO    38      -3.300  40.239  14.683  1.00 25.00           C
ATOM     39  CA  TYR    39      -3.663  38.845  18.243  1.00 25.00           C
ATOM     40  CA  LEU    40      -0.079  39.627  19.304  1.00 25.00           C
ATOM     41  CA  VAL    41       0.400  43.071  20.841  1.00 25.00           C
ATOM     42  CA  PRO    42       2.791  43.291  23.730  1.00 25.00           C
ATOM     43  CA  LEU    43       3.937  39.980  22.347  1.00 25.00           C
ATOM     44  CA  SER    44       7.147  38.986  24.133  1.00 25.00           C
ATOM     45  CA  TYR    45       5.566  39.942  27.459  1.00 25.00           C
ATOM     46  CA  LEU    46       3.574  42.815  28.832  1.00 25.00           C
ATOM     47  CA  TRP    47       1.759  42.737  32.222  1.00 25.00           C
ATOM     48  CA  ASP    48      -0.270  45.793  33.326  1.00 25.00           C
ATOM     49  CA  GLY    49      -3.783  44.404  32.595  1.00 25.00           C
ATOM     50  CA  GLU    50      -2.307  43.525  29.233  1.00 25.00           C
ATOM     51  CA  THR    51      -0.561  40.740  27.211  1.00 25.00           C
ATOM     52  CA  PHE    52      -0.951  38.343  24.242  1.00 25.00           C
ATOM     53  CA  LEU    53      -1.242  35.807  21.498  1.00 25.00           C
ATOM     54  CA  VAL    54      -0.397  33.342  18.668  1.00 25.00           C
ATOM     55  CA  ALA    55      -2.601  33.765  15.598  1.00 25.00           C
ATOM     56  CA  THR    56      -6.219  34.747  16.240  1.00 25.00           C
ATOM     57  CA  PRO    57      -7.177  31.231  15.369  1.00 25.00           C
ATOM     58  CA  ALA    58     -10.437  29.358  15.804  1.00 25.00           C
ATOM     59  CA  ALA    59     -11.896  29.979  12.316  1.00 25.00           C
ATOM     60  CA  SER    60      -9.477  28.046  10.077  1.00 25.00           C
ATOM     61  CA  PRO    61     -12.250  28.644   7.457  1.00 25.00           C
ATOM     62  CA  THR    62     -10.320  26.064   5.419  1.00 25.00           C
ATOM     63  CA  GLY    63      -7.276  23.816   5.817  1.00 25.00           C
ATOM     64  CA  ARG    64      -8.320  22.568   9.231  1.00 25.00           C
ATOM     65  CA  ASN    65      -5.890  22.799  12.168  1.00 25.00           C
ATOM     66  CA  LEU    66      -4.570  26.254  12.996  1.00 25.00           C
ATOM     67  CA  SER    67      -4.487  26.829   9.220  1.00 25.00           C
ATOM     68  CA  GLU    68      -0.636  26.735   9.200  1.00 25.00           C
ATOM     69  CA  THR    69       0.932  28.797  12.032  1.00 25.00           C
ATOM     70  CA  GLY    70       2.010  31.571  14.417  1.00 25.00           C
ATOM     71  CA  ARG    71       2.214  35.377  14.905  1.00 25.00           C
ATOM     72  CA  VAL    72       4.112  35.948  18.152  1.00 25.00           C
ATOM     73  CA  ARG    73       3.956  34.976  21.834  1.00 25.00           C
ATOM     74  CA  LEU    74       3.326  35.866  25.448  1.00 25.00           C
ATOM     75  CA  GLY    75       0.383  34.710  27.489  1.00 25.00           C
ATOM     76  CA  ILE    76       0.030  36.824  30.614  1.00 25.00           C
ATOM     77  CA  GLY    77      -3.733  36.676  30.819  1.00 25.00           C
ATOM     78  CA  PRO    78      -6.817  35.090  32.475  1.00 25.00           C
ATOM     79  CA  THR    79      -6.318  31.298  32.147  1.00 25.00           C
ATOM     80  CA  ARG    80      -2.894  31.738  30.549  1.00 25.00           C
ATOM     81  CA  ASP    81      -1.616  30.060  27.349  1.00 25.00           C
ATOM     82  CA  LEU    82      -1.673  31.917  24.023  1.00 25.00           C
ATOM     83  CA  VAL    83       1.868  30.701  23.529  1.00 25.00           C
ATOM     84  CA  LEU    84       3.435  30.617  20.011  1.00 25.00           C
ATOM     85  CA  VAL    85       6.466  31.513  17.905  1.00 25.00           C
ATOM     86  CA  GLU    86       8.317  29.536  20.581  1.00 25.00           C
ATOM     87  CA  GLY    87       6.849  31.329  23.661  1.00 25.00           C
ATOM     88  CA  THR    88       8.589  34.056  25.674  1.00 25.00           C
ATOM     89  CA  ALA    89       9.928  36.838  27.867  1.00 25.00           C
ATOM     90  CA  LEU    90      10.428  39.756  30.235  1.00 25.00           C
ATOM     91  CA  PRO    91      11.345  38.772  33.780  1.00 25.00           C
ATOM     92  CA  LEU    92       9.518  41.037  36.195  1.00 25.00           C
ATOM     93  CA  GLU    93       8.768  40.886  39.931  1.00 25.00           C
ATOM     94  CA  PRO    94      11.631  38.552  40.713  1.00 25.00           C
ATOM     95  CA  ALA    95       9.597  35.324  41.247  1.00 25.00           C
ATOM     96  CA  GLY    96       7.177  32.563  40.305  1.00 25.00           C
ATOM     97  CA  LEU    97       4.268  34.259  38.456  1.00 25.00           C
ATOM     98  CA  PRO    98       2.010  34.234  41.568  1.00 25.00           C
ATOM     99  CA  ASP    99       1.672  30.539  40.894  1.00 25.00           C
ATOM    100  CA  GLY   100       3.688  29.000  38.021  1.00 25.00           C
ATOM    101  CA  VAL   101       4.277  30.382  34.563  1.00 25.00           C
ATOM    102  CA  GLY   102       7.978  30.048  33.838  1.00 25.00           C
ATOM    103  CA  ASP   103       7.990  33.848  34.234  1.00 25.00           C
ATOM    104  CA  THR   104       5.529  34.423  31.349  1.00 25.00           C
ATOM    105  CA  PHE   105       4.849  31.490  28.982  1.00 25.00           C
ATOM    106  CA  ALA   106       3.591  28.189  27.561  1.00 25.00           C
ATOM    107  CA  GLU   107       2.171  24.660  27.215  1.00 25.00           C
ATOM    108  CA  LYS   108       1.155  21.763  29.557  1.00 25.00           C
ATOM    109  CA  THR   109       4.940  21.291  29.751  1.00 25.00           C
ATOM    110  CA  GLY   110       4.523  20.100  33.359  1.00 25.00           C
ATOM    111  CA  PHE   111       2.489  17.335  31.721  1.00 25.00           C
ATOM    112  CA  ASP   112       3.572  16.009  28.325  1.00 25.00           C
ATOM    113  CA  PRO   113       6.106  17.779  26.161  1.00 25.00           C
ATOM    114  CA  ARG   114       6.345  14.847  23.710  1.00 25.00           C
ATOM    115  CA  ARG   115       5.329  17.146  20.821  1.00 25.00           C
ATOM    116  CA  LEU   116       1.723  16.414  21.598  1.00 25.00           C
ATOM    117  CA  THR   117       1.430  18.906  24.520  1.00 25.00           C
ATOM    118  CA  THR   118       2.489  21.751  22.298  1.00 25.00           C
ATOM    119  CA  SER   119       2.873  25.479  21.675  1.00 25.00           C
ATOM    120  CA  TYR   120       4.944  25.788  18.481  1.00 25.00           C
ATOM    121  CA  LEU   121       1.728  26.947  16.975  1.00 25.00           C
ATOM    122  CA  TYR   122      -1.103  28.278  19.093  1.00 25.00           C
ATOM    123  CA  PHE   123      -4.328  30.137  19.764  1.00 25.00           C
ATOM    124  CA  ARG   124      -5.752  33.446  21.080  1.00 25.00           C
ATOM    125  CA  ILE   125      -6.704  31.552  24.226  1.00 25.00           C
ATOM    126  CA  SER   126     -10.419  32.274  24.601  1.00 25.00           C
ATOM    127  CA  PRO   127     -12.795  34.350  26.628  1.00 25.00           C
ATOM    128  CA  ARG   128     -10.646  36.046  29.307  1.00 25.00           C
ATOM    129  CA  ARG   129      -7.550  35.698  27.080  1.00 25.00           C
ATOM    130  CA  VAL   130      -9.466  37.224  24.136  1.00 25.00           C
ATOM    131  CA  GLN   131     -10.590  40.141  26.349  1.00 25.00           C
ATOM    132  CA  ALA   132      -6.977  40.703  27.487  1.00 25.00           C
ATOM    133  CA  TRP   133      -5.800  40.690  23.842  1.00 25.00           C
ATOM    134  CA  ARG   134      -8.514  43.233  22.932  1.00 25.00           C
ATOM    135  CA  GLU   135      -7.441  45.463  25.855  1.00 25.00           C
ATOM    136  CA  ALA   136      -3.792  45.245  24.712  1.00 25.00           C
ATOM    137  CA  ASN   137      -4.826  46.191  21.148  1.00 25.00           C
ATOM    138  CA  GLU   138      -6.809  49.181  22.490  1.00 25.00           C
ATOM    139  CA  LEU   139      -3.779  50.296  24.550  1.00 25.00           C
ATOM    140  CA  SER   140      -1.541  50.020  21.455  1.00 25.00           C
ATOM    141  CA  GLY   141      -4.041  52.100  19.433  1.00 25.00           C
ATOM    142  CA  ARG   142      -4.102  54.755  22.193  1.00 25.00           C
ATOM    143  CA  GLU   143      -0.274  54.852  22.219  1.00 25.00           C
ATOM    144  CA  LEU   144      -0.234  55.264  18.412  1.00 25.00           C
ATOM    145  CA  MET   145       1.162  51.890  17.532  1.00 25.00           C
ATOM    146  CA  ARG   146       4.299  53.886  16.740  1.00 25.00           C
ATOM    147  CA  ASP   147       6.430  54.150  19.877  1.00 25.00           C
ATOM    148  CA  GLY   148       8.577  51.076  19.181  1.00 25.00           C
ATOM    149  CA  GLU   149       7.125  47.711  19.960  1.00 25.00           C
ATOM    150  CA  TRP   150       8.187  44.101  20.452  1.00 25.00           C
ATOM    151  CA  LEU   151       5.800  42.242  18.085  1.00 25.00           C
TER
END
