
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  155 (  155),  selected  148 , name T0321TS599_4-D2
# Molecule2: number of CA atoms  148 ( 1130),  selected  148 , name T0321_D2.pdb
# PARAMETERS: T0321TS599_4-D2.T0321_D2.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    39       141 - 179         4.94    24.66
  LCS_AVERAGE:     21.56

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    18       158 - 175         1.94    23.73
  LONGEST_CONTINUOUS_SEGMENT:    18       217 - 234         1.97    33.73
  LONGEST_CONTINUOUS_SEGMENT:    18       218 - 235         1.90    32.83
  LCS_AVERAGE:      9.19

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    15       161 - 175         0.92    24.17
  LONGEST_CONTINUOUS_SEGMENT:    15       220 - 234         0.88    32.21
  LCS_AVERAGE:      6.13

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  148
LCS_GDT     V      97     V      97      3    6   12     3    3    4    5    5    6    7    8    9    9    9   10   14   24   26   28   28   29   30   32 
LCS_GDT     I      98     I      98      4    6   12     3    4    4    5    5    6    7    8   11   11   12   13   21   24   26   28   28   29   30   32 
LCS_GDT     F      99     F      99      4    6   12     3    4    4    5    5    6    8   10   11   12   14   18   21   24   26   28   28   29   30   32 
LCS_GDT     S     100     S     100      4    6   12     3    4    4    5    5    6    8   10   11   13   14   18   21   24   26   28   28   29   30   32 
LCS_GDT     D     101     D     101      4    6   12     3    4    4    5    5    6    7    8   11   13   13   14   15   16   26   28   28   28   30   32 
LCS_GDT     A     102     A     102      3    6   12     3    3    3    4    5    6    7    8    9   11   13   14   15   15   17   20   23   25   31   32 
LCS_GDT     N     110     N     110      3    5   20     3    3    3    4   10   12   14   15   15   16   16   16   17   17   18   18   19   19   20   26 
LCS_GDT     D     111     D     111      8   13   20     7    7    8    9   12   13   13   15   15   16   16   16   17   17   18   18   19   19   20   21 
LCS_GDT     P     112     P     112      8   13   20     7    7    8    9   12   13   14   15   15   16   16   16   17   17   18   18   19   19   20   21 
LCS_GDT     F     113     F     113      8   13   20     7    7    8    9   12   13   14   15   15   16   16   16   17   17   18   18   19   19   20   21 
LCS_GDT     I     114     I     114      8   13   20     7    7    8   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   20   21 
LCS_GDT     M     115     M     115      8   13   20     7    7    8   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   20   36 
LCS_GDT     S     116     S     116      9   13   20     7    7    9   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   21   36 
LCS_GDT     Q     117     Q     117      9   13   20     7    7    9   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   20   31 
LCS_GDT     N     118     N     118      9   13   20     4    7    9   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   20   25 
LCS_GDT     E     119     E     119      9   13   20     4    7    9   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   21   29 
LCS_GDT     V     120     V     120      9   13   20     3    7    9   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   21   25 
LCS_GDT     K     121     K     121      9   13   20     3    7    9   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   20   21 
LCS_GDT     G     122     G     122      9   13   20     3    7    9   10   12   13   14   15   15   16   16   16   17   17   18   18   19   19   20   21 
LCS_GDT     K     123     K     123      9   13   21     3    7    9   10   12   13   14   15   15   16   16   16   17   19   19   20   20   20   21   24 
LCS_GDT     K     124     K     124      9   13   21     3    7    9    9   11   13   14   15   15   16   16   17   18   19   19   20   20   20   21   22 
LCS_GDT     V     125     V     125      8   12   21     4    6    8    9   11   12   13   13   15   16   17   17   18   19   19   20   20   20   21   24 
LCS_GDT     G     126     G     126      8   12   21     4    6    7    9   11   12   13   15   17   17   17   18   18   19   19   20   20   20   21   24 
LCS_GDT     V     127     V     127      8   12   21     4    6    7    8   11   12   15   17   17   17   17   18   18   19   19   20   20   22   24   25 
LCS_GDT     V     128     V     128      8   12   21     4    6    7    8   11   12   12   17   17   17   17   18   18   19   19   20   21   22   24   25 
LCS_GDT     G     129     G     129      8   15   21     4    6    7    8   14   15   15   17   17   17   17   18   18   19   19   28   28   29   30   32 
LCS_GDT     H     130     H     130      5   15   21     3    4    6   10   14   15   15   17   17   17   19   20   22   24   26   28   28   29   30   32 
LCS_GDT     F     131     F     131      5   15   21     3    4    8   11   14   15   15   17   17   17   17   20   22   23   26   28   28   29   30   32 
LCS_GDT     P     132     P     132      5   15   21     3    4    6    8   14   15   15   17   17   17   19   20   22   24   26   28   28   29   30   32 
LCS_GDT     H     133     H     133      7   15   21     6    6   10   11   14   15   15   17   17   17   19   20   22   24   26   28   28   29   30   32 
LCS_GDT     L     134     L     134      9   15   21     6    6   10   11   14   15   15   17   17   17   19   20   22   24   26   28   28   31   40   41 
LCS_GDT     E     135     E     135      9   15   21     6    6   10   11   14   15   15   17   17   17   19   20   22   24   26   28   30   35   41   44 
LCS_GDT     S     136     S     136      9   15   21     6    7   10   11   14   15   15   17   17   17   19   20   22   24   26   28   32   36   40   43 
LCS_GDT     L     137     L     137      9   15   21     6    6   10   11   14   15   15   17   17   17   19   20   22   25   32   38   42   46   49   53 
LCS_GDT     L     138     L     138      9   15   21     6    7   10   11   14   15   15   17   17   17   19   26   31   37   39   40   44   48   53   56 
LCS_GDT     E     139     E     139      9   15   21     6    7   10   11   14   15   15   17   17   19   25   27   30   36   39   40   43   48   53   56 
LCS_GDT     P     140     P     140      9   15   21     6    7   10   11   14   15   15   17   17   19   25   28   30   32   33   40   42   45   48   53 
LCS_GDT     I     141     I     141      9   15   39     6    7   10   11   14   15   19   22   25   29   32   34   36   38   40   42   48   50   53   56 
LCS_GDT     C     142     C     142      9   15   39     6    9   10   11   17   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     D     143     D     143      9   15   39     6    9   11   15   18   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     L     144     L     144      9   10   39     6    9   11   15   18   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     S     145     S     145      9   10   39     6    9   11   15   18   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     I     146     I     146      9   10   39     6    9   11   15   18   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     L     147     L     147      9   10   39     6    9    9   10   18   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     E     148     E     148      9   10   39     5    9    9   15   18   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     W     149     W     149      9   10   39     6    9    9   10   11   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     S     150     S     150      9   10   39     4    9    9   10   17   20   22   25   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     P     151     P     151      4   10   39     3    4    6    7    9   10   13   18   25   29   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     E     152     E     152      4    8   39     3    4    8   13   16   17   22   26   27   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     E     153     E     153      4   15   39     3    4    6    9   15   20   22   25   27   29   31   34   43   43   44   45   48   52   53   56 
LCS_GDT     G     154     G     154      7   15   39     3    4    9   11   15   20   22   23   27   29   31   34   43   43   44   45   48   52   53   56 
LCS_GDT     D     155     D     155      7   15   39     3    5    7   10   12   15   22   23   24   28   30   34   43   43   44   45   48   52   53   56 
LCS_GDT     Y     156     Y     156      7   17   39     3    6    9   13   16   20   22   26   27   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     P     157     P     157      7   17   39     3    6    9   13   17   20   22   24   26   30   31   32   36   39   41   44   48   52   53   56 
LCS_GDT     L     158     L     158      7   18   39     4    6    9   11   16   20   22   23   26   30   31   32   36   39   41   43   43   45   50   55 
LCS_GDT     P     159     P     159      7   18   39     4    6    9   11   17   20   22   23   26   30   31   32   36   39   41   43   43   44   46   51 
LCS_GDT     A     160     A     160     14   18   39     5   11   15   18   19   21   22   24   27   30   32   34   37   39   41   43   47   52   53   56 
LCS_GDT     S     161     S     161     15   18   39     5   11   15   18   19   21   22   26   29   30   32   34   37   39   41   44   48   52   53   56 
LCS_GDT     E     162     E     162     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   37   39   41   43   48   52   53   56 
LCS_GDT     F     163     F     163     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   37   39   41   45   48   52   53   56 
LCS_GDT     I     164     I     164     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     L     165     L     165     15   18   39     4   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     P     166     P     166     15   18   39     4   13   15   18   19   21   22   26   29   30   32   34   37   39   44   45   48   52   53   56 
LCS_GDT     E     167     E     167     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     C     168     C     168     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     D     169     D     169     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     Y     170     Y     170     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     V     171     V     171     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     Y     172     Y     172     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     I     173     I     173     15   18   39     5   13   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     T     174     T     174     15   18   39     5   10   15   18   19   21   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     C     175     C     175     15   18   39     3   13   15   18   19   21   22   26   29   30   32   34   37   39   41   45   48   52   53   56 
LCS_GDT     A     176     A     176      6   17   39     3    6    9   12   15   19   22   26   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     S     177     S     177      6    9   39     3    6    6    9   12   17   21   22   26   28   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     V     178     V     178      6    7   39     4    6    6    8   13   14   21   25   29   30   32   34   43   43   44   45   48   52   53   56 
LCS_GDT     V     179     V     179      6    7   39     4    6    6    8    8   10   12   14   20   25   29   32   43   43   44   45   48   52   53   56 
LCS_GDT     D     180     D     180      6   14   36     4    6    6   10   17   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     K     181     K     181     11   14   36     4    6   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     T     182     T     182     11   14   36     4   10   11   12   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     L     183     L     183     11   14   36     9   10   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     P     184     P     184     11   14   36     9   10   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     R     185     R     185     11   14   36     9   10   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     L     186     L     186     11   14   36     9   10   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     L     187     L     187     11   14   36     9   10   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     E     188     E     188     11   14   36     9   10   11   15   18   21   22   25   27   29   30   32   43   43   44   45   48   52   53   56 
LCS_GDT     L     189     L     189     11   14   36     9   10   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     S     190     S     190     11   14   36     9   10   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     R     191     R     191     11   14   36     9   10   11   15   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     N     192     N     192      4   14   36     4    5    9   13   18   21   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     A     193     A     193      4   14   36     4    5    6   11   14   19   22   25   27   29   30   33   43   43   44   45   48   52   53   56 
LCS_GDT     R     194     R     194      6   12   36     3    5    9   13   19   21   22   26   29   30   32   34   37   39   41   44   48   52   53   56 
LCS_GDT     R     195     R     195      6   12   36     3   10   13   18   19   21   22   26   29   30   32   34   37   39   41   44   48   52   53   56 
LCS_GDT     I     196     I     196      6   12   36     5   13   15   18   19   21   22   26   29   30   32   34   37   39   41   44   48   52   53   56 
LCS_GDT     T     197     T     197      6   12   36     3    6    9   12   13   18   21   23   26   30   31   34   36   39   41   43   43   45   46   49 
LCS_GDT     L     198     L     198      6   12   36     3    6    9   12   14   18   22   23   26   30   31   32   36   39   41   43   43   45   47   55 
LCS_GDT     V     199     V     199      6   12   36     3    6    9   12   14   18   21   22   26   27   30   32   34   36   38   41   43   47   49   51 
LCS_GDT     G     200     G     200      6   12   36     3    6    9   12   14   18   21   22   26   28   30   32   34   36   39   41   43   47   49   51 
LCS_GDT     P     201     P     201      6   12   36     3    6    9   12   14   18   21   22   26   28   30   33   33   35   37   38   43   47   49   51 
LCS_GDT     G     202     G     202      4   11   36     3    4    8   11   12   14   15   20   25   27   30   33   33   35   37   38   39   40   42   43 
LCS_GDT     T     203     T     203      3    6   36     3    3    3    3    4    5    9   11   12   16   19   24   30   35   37   38   39   40   42   42 
LCS_GDT     P     204     P     204      3    6   36     3    3    5    8   12   13   14   15   18   22   24   28   30   31   32   36   38   40   41   43 
LCS_GDT     L     205     L     205      3   15   36     3    3    4    5    8   15   15   16   18   24   25   28   30   31   33   35   37   40   41   43 
LCS_GDT     A     206     A     206      5   15   32     3    4    9   12   14   15   15   16   18   22   24   28   30   31   32   33   37   38   41   43 
LCS_GDT     P     207     P     207      8   15   25     4    5    8   13   14   15   15   16   17   18   21   21   23   27   30   33   34   38   39   41 
LCS_GDT     V     208     V     208     12   15   25     4    8   11   13   14   15   15   16   17   18   21   21   22   24   28   31   33   36   37   40 
LCS_GDT     L     209     L     209     12   15   25     4    9   11   13   14   15   15   16   17   18   21   21   22   27   31   33   36   37   40   42 
LCS_GDT     F     210     F     210     12   15   25     4    9   11   13   14   15   15   16   17   18   21   21   23   27   30   33   34   36   39   42 
LCS_GDT     E     211     E     211     12   15   25     4    9   11   13   14   15   15   16   17   18   21   21   22   24   28   28   32   36   37   39 
LCS_GDT     H     212     H     212     12   15   25     4    9   11   13   14   15   15   16   17   18   21   21   22   25   31   33   36   37   40   42 
LCS_GDT     G     213     G     213     12   15   25     3    8   11   13   14   15   15   16   17   18   21   21   22   24   27   31   33   36   39   42 
LCS_GDT     L     214     L     214     12   15   25     4    9   11   13   14   15   15   16   17   18   21   21   22   25   29   33   36   37   40   42 
LCS_GDT     Q     215     Q     215     12   15   27     3    8   11   13   14   15   15   16   17   18   21   22   27   28   30   33   34   36   39   42 
LCS_GDT     E     216     E     216     12   15   36     4    9   11   13   14   15   15   16   17   22   26   28   30   31   34   39   43   47   49   51 
LCS_GDT     L     217     L     217     12   18   36     4    9   11   13   14   15   15   17   21   24   27   30   32   36   39   41   43   47   49   51 
LCS_GDT     S     218     S     218     12   18   36     4    9   13   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     G     219     G     219     12   18   36     4    9   11   17   17   19   21   22   25   28   30   33   34   36   39   41   43   47   49   51 
LCS_GDT     F     220     F     220     15   18   36     3   11   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     M     221     M     221     15   18   36     3   11   15   17   17   19   21   22   25   28   30   33   33   35   37   38   39   40   48   49 
LCS_GDT     V     222     V     222     15   18   36     3   11   15   17   17   19   21   22   25   28   30   33   33   35   37   38   40   47   49   51 
LCS_GDT     K     223     K     223     15   18   36     3   12   15   17   17   19   21   22   25   28   30   33   33   35   37   38   39   40   42   42 
LCS_GDT     D     224     D     224     15   18   36     4   12   15   17   17   19   21   22   25   28   30   33   33   35   37   38   39   40   42   43 
LCS_GDT     N     225     N     225     15   18   36     7   12   15   17   17   19   21   22   25   28   30   33   33   35   37   38   39   40   48   49 
LCS_GDT     A     226     A     226     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   35   37   39   43   47   49   51 
LCS_GDT     R     227     R     227     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     A     228     A     228     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     F     229     F     229     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     R     230     R     230     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     I     231     I     231     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     V     232     V     232     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     A     233     A     233     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     G     234     G     234     15   18   36     8   12   15   17   17   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     A     235     A     235      3   18   36     3    3    5    7   10   12   18   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     E     236     E     236      3   15   36     3    3    6   12   14   17   20   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     K     237     K     237      3   15   36     3    3    5    9   13   14   16   18   21   23   27   31   33   36   39   41   43   47   49   51 
LCS_GDT     V     238     V     238      3    7   36     2    3    4    6   10   13   18   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     K     239     K     239      6    8   36     3    4    5   10   14   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     I     240     I     240      6    8   36     3    5    5    6   14   19   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     Y     241     Y     241      6    8   36     4    5    6   10   14   17   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     S     242     S     242      6    8   36     4    5    5    7   10   13   17   21   25   27   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     A     243     A     243      6    9   36     4    5    5    7   10   13   17   21   23   25   29   31   33   36   39   41   43   47   49   51 
LCS_GDT     G     244     G     244      6    9   36     4    5    6    7   10   14   19   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     Q     245     Q     245      6    9   36     4    5    6    7   10   14   19   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     K     246     K     246      6    9   36     4    5    6    7   13   16   21   22   25   28   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     V     247     V     247      6    9   36     4    5    6    7   10   14   19   21   24   27   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     T     248     T     248      6    9   36     4    5    6    7   11   14   19   22   25   27   30   33   33   36   39   41   43   47   49   51 
LCS_GDT     I     249     I     249      6    9   36     4    5    6    7   10   14   19   20   22   25   29   33   33   36   39   41   43   47   49   51 
LCS_GDT     K     250     K     250      5    9   36     3    3    5    7   10   14   19   20   23   25   29   33   33   35   37   39   43   47   49   51 
LCS_GDT     K     251     K     251      4    9   36     1    3    4    7    8    9   14   17   20   22   25   28   31   34   37   38   39   40   46   51 
LCS_AVERAGE  LCS_A:  12.29  (   6.13    9.19   21.56 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA      9     13     15     18     19     21     22     26     29     30     32     34     43     43     44     45     48     52     53     56 
GDT PERCENT_CA   6.08   8.78  10.14  12.16  12.84  14.19  14.86  17.57  19.59  20.27  21.62  22.97  29.05  29.05  29.73  30.41  32.43  35.14  35.81  37.84
GDT RMS_LOCAL    0.31   0.66   0.80   1.09   1.24   1.70   1.82   2.65   2.92   3.08   3.27   3.51   5.08   5.08   5.21   5.39   5.84   6.19   6.30   6.74
GDT RMS_ALL_CA  28.33  24.17  24.10  24.11  24.14  27.17  27.40  25.02  25.12  25.06  24.91  25.04  26.43  26.43  26.40  26.36  26.10  25.94  25.88  25.90

#      Molecule1      Molecule2       DISTANCE
LGA    V      97      V      97         47.560
LGA    I      98      I      98         48.619
LGA    F      99      F      99         50.487
LGA    S     100      S     100         54.337
LGA    D     101      D     101         57.093
LGA    A     102      A     102         53.670
LGA    N     110      N     110         36.224
LGA    D     111      D     111         31.699
LGA    P     112      P     112         29.854
LGA    F     113      F     113         27.662
LGA    I     114      I     114         28.769
LGA    M     115      M     115         29.415
LGA    S     116      S     116         26.990
LGA    Q     117      Q     117         25.703
LGA    N     118      N     118         27.527
LGA    E     119      E     119         27.073
LGA    V     120      V     120         24.253
LGA    K     121      K     121         23.759
LGA    G     122      G     122         22.186
LGA    K     123      K     123         22.108
LGA    K     124      K     124         22.047
LGA    V     125      V     125         21.622
LGA    G     126      G     126         22.370
LGA    V     127      V     127         24.340
LGA    V     128      V     128         26.201
LGA    G     129      G     129         30.114
LGA    H     130      H     130         31.527
LGA    F     131      F     131         33.699
LGA    P     132      P     132         34.529
LGA    H     133      H     133         30.646
LGA    L     134      L     134         24.804
LGA    E     135      E     135         22.066
LGA    S     136      S     136         23.578
LGA    L     137      L     137         19.183
LGA    L     138      L     138         14.026
LGA    E     139      E     139         13.845
LGA    P     140      P     140         13.969
LGA    I     141      I     141          7.055
LGA    C     142      C     142          3.495
LGA    D     143      D     143          3.534
LGA    L     144      L     144          3.154
LGA    S     145      S     145          3.054
LGA    I     146      I     146          2.571
LGA    L     147      L     147          3.148
LGA    E     148      E     148          3.092
LGA    W     149      W     149          3.789
LGA    S     150      S     150          4.225
LGA    P     151      P     151          6.998
LGA    E     152      E     152          6.621
LGA    E     153      E     153         10.893
LGA    G     154      G     154         10.622
LGA    D     155      D     155         10.798
LGA    Y     156      Y     156          6.622
LGA    P     157      P     157          8.762
LGA    L     158      L     158          9.515
LGA    P     159      P     159          8.850
LGA    A     160      A     160          5.127
LGA    S     161      S     161          3.772
LGA    E     162      E     162          3.153
LGA    F     163      F     163          3.350
LGA    I     164      I     164          1.467
LGA    L     165      L     165          1.465
LGA    P     166      P     166          2.255
LGA    E     167      E     167          1.864
LGA    C     168      C     168          1.598
LGA    D     169      D     169          1.962
LGA    Y     170      Y     170          2.051
LGA    V     171      V     171          1.872
LGA    Y     172      Y     172          2.297
LGA    I     173      I     173          1.864
LGA    T     174      T     174          1.878
LGA    C     175      C     175          4.127
LGA    A     176      A     176          2.005
LGA    S     177      S     177          6.296
LGA    V     178      V     178          5.136
LGA    V     179      V     179         10.001
LGA    D     180      D     180         13.292
LGA    K     181      K     181         15.039
LGA    T     182      T     182         15.517
LGA    L     183      L     183         15.577
LGA    P     184      P     184         18.751
LGA    R     185      R     185         18.029
LGA    L     186      L     186         14.931
LGA    L     187      L     187         16.635
LGA    E     188      E     188         18.732
LGA    L     189      L     189         16.125
LGA    S     190      S     190         14.530
LGA    R     191      R     191         17.151
LGA    N     192      N     192         14.186
LGA    A     193      A     193          8.587
LGA    R     194      R     194          3.649
LGA    R     195      R     195          2.289
LGA    I     196      I     196          2.093
LGA    T     197      T     197          6.919
LGA    L     198      L     198          6.976
LGA    V     199      V     199         11.286
LGA    G     200      G     200         12.585
LGA    P     201      P     201         17.846
LGA    G     202      G     202         17.980
LGA    T     203      T     203         22.472
LGA    P     204      P     204         24.873
LGA    L     205      L     205         24.651
LGA    A     206      A     206         25.328
LGA    P     207      P     207         30.365
LGA    V     208      V     208         27.425
LGA    L     209      L     209         21.896
LGA    F     210      F     210         27.024
LGA    E     211      E     211         28.322
LGA    H     212      H     212         21.903
LGA    G     213      G     213         22.046
LGA    L     214      L     214         21.016
LGA    Q     215      Q     215         25.985
LGA    E     216      E     216         24.414
LGA    L     217      L     217         19.124
LGA    S     218      S     218         18.208
LGA    G     219      G     219         14.499
LGA    F     220      F     220         17.849
LGA    M     221      M     221         18.982
LGA    V     222      V     222         24.197
LGA    K     223      K     223         26.679
LGA    D     224      D     224         32.252
LGA    N     225      N     225         34.311
LGA    A     226      A     226         40.548
LGA    R     227      R     227         38.920
LGA    A     228      A     228         34.222
LGA    F     229      F     229         39.054
LGA    R     230      R     230         43.918
LGA    I     231      I     231         39.683
LGA    V     232      V     232         37.347
LGA    A     233      A     233         44.026
LGA    G     234      G     234         46.296
LGA    A     235      A     235         47.892
LGA    E     236      E     236         45.304
LGA    K     237      K     237         40.719
LGA    V     238      V     238         39.609
LGA    K     239      K     239         38.218
LGA    I     240      I     240         33.919
LGA    Y     241      Y     241         31.869
LGA    S     242      S     242         37.799
LGA    A     243      A     243         37.082
LGA    G     244      G     244         32.013
LGA    Q     245      Q     245         30.885
LGA    K     246      K     246         26.491
LGA    V     247      V     247         27.725
LGA    T     248      T     248         26.252
LGA    I     249      I     249         29.402
LGA    K     250      K     250         34.194
LGA    K     251      K     251         37.979

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  155  148    4.0     26    2.65    17.230    15.317     0.946

LGA_LOCAL      RMSD =  2.647  Number of atoms =   26  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 25.124  Number of atoms =  148 
Std_ALL_ATOMS  RMSD = 19.495  (standard rmsd on all 148 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.568823 * X  +   0.720623 * Y  +   0.396414 * Z  +  21.003151
  Y_new =  -0.383796 * X  +   0.193719 * Y  +  -0.902870 * Z  +  43.041061
  Z_new =  -0.727421 * X  +  -0.665715 * Y  +   0.166380 * Z  +  64.791801 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -1.325887    1.815706  [ DEG:   -75.9677    104.0323 ]
  Theta =   0.814556    2.327036  [ DEG:    46.6706    133.3294 ]
  Phi   =  -2.548036    0.593557  [ DEG:  -145.9917     34.0083 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0321TS599_4-D2                               
REMARK     2: T0321_D2.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0321TS599_4-D2.T0321_D2.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  155  148   4.0   26   2.65  15.317    19.49
REMARK  ---------------------------------------------------------- 
MOLECULE T0321TS599_4-D2
PFRMAT TS                                                                       
TARGET T0321                                                                    
MODEL  4                                                                        
PARENT N/A                                                                      
ATOM     97  CA  VAL    97      39.871  48.883  61.567  1.00  0.00              
ATOM     98  CA  ILE    98      42.665  48.336  64.767  1.00  0.00              
ATOM     99  CA  PHE    99      45.342  50.972  64.607  1.00  0.00              
ATOM    100  CA  SER   100      48.615  49.466  65.556  1.00  0.00              
ATOM    101  CA  ASP   101      50.097  52.113  67.733  1.00  0.00              
ATOM    102  CA  ALA   102      48.790  55.501  67.082  1.00  0.00              
ATOM    103  CA  LYS   103      45.152  56.185  67.677  1.00  0.00              
ATOM    104  CA  ARG   104      44.358  58.352  64.650  1.00  0.00              
ATOM    105  CA  VAL   105      42.845  61.577  66.053  1.00  0.00              
ATOM    106  CA  GLU   106      40.024  62.625  63.714  1.00  0.00              
ATOM    107  CA  ASP   107      39.710  66.387  64.203  1.00  0.00              
ATOM    108  CA  ARG   108      35.893  66.825  64.323  1.00  0.00              
ATOM    109  CA  MET   109      35.086  64.142  66.955  1.00  0.00              
ATOM    110  CA  ASN   110      38.247  64.485  69.057  1.00  0.00              
ATOM    111  CA  ASP   111      36.747  65.006  72.470  1.00  0.00              
ATOM    112  CA  PRO   112      34.516  62.100  72.038  1.00  0.00              
ATOM    113  CA  PHE   113      37.275  59.831  70.841  1.00  0.00              
ATOM    114  CA  ILE   114      39.576  60.651  73.751  1.00  0.00              
ATOM    115  CA  MET   115      36.846  60.060  76.198  1.00  0.00              
ATOM    116  CA  SER   116      36.083  56.719  74.647  1.00  0.00              
ATOM    117  CA  GLN   117      39.682  55.526  74.629  1.00  0.00              
ATOM    118  CA  ASN   118      40.011  56.301  78.374  1.00  0.00              
ATOM    119  CA  GLU   119      36.833  54.482  79.391  1.00  0.00              
ATOM    120  CA  VAL   120      38.046  51.027  78.521  1.00  0.00              
ATOM    121  CA  LYS   121      41.019  50.618  80.856  1.00  0.00              
ATOM    122  CA  GLY   122      40.238  47.352  82.600  1.00  0.00              
ATOM    123  CA  LYS   123      37.822  45.989  80.093  1.00  0.00              
ATOM    124  CA  LYS   124      38.097  42.429  78.721  1.00  0.00              
ATOM    125  CA  VAL   125      37.864  42.120  75.583  1.00  0.00              
ATOM    126  CA  GLY   126      36.734  38.374  73.683  1.00  0.00              
ATOM    127  CA  VAL   127      37.702  37.682  70.647  1.00  0.00              
ATOM    128  CA  VAL   128      35.692  34.477  68.759  1.00  0.00              
ATOM    129  CA  GLY   129      37.328  32.572  66.466  1.00  0.00              
ATOM    130  CA  HIS   130      35.910  28.980  65.056  1.00  0.00              
ATOM    131  CA  PHE   131      36.692  26.443  67.834  1.00  0.00              
ATOM    132  CA  PRO   132      33.675  24.375  68.576  1.00  0.00              
ATOM    133  CA  HIS   133      33.121  25.686  72.165  1.00  0.00              
ATOM    134  CA  LEU   134      33.026  29.142  70.713  1.00  0.00              
ATOM    135  CA  GLU   135      30.675  28.345  68.099  1.00  0.00              
ATOM    136  CA  SER   136      28.134  26.889  70.453  1.00  0.00              
ATOM    137  CA  LEU   137      28.292  29.947  72.568  1.00  0.00              
ATOM    138  CA  LEU   138      27.949  32.252  69.790  1.00  0.00              
ATOM    139  CA  GLU   139      24.695  30.636  68.380  1.00  0.00              
ATOM    140  CA  PRO   140      23.068  30.616  71.785  1.00  0.00              
ATOM    141  CA  ILE   141      23.648  34.204  72.540  1.00  0.00              
ATOM    142  CA  CYS   142      23.342  36.009  69.365  1.00  0.00              
ATOM    143  CA  ASP   143      21.527  36.454  66.116  1.00  0.00              
ATOM    144  CA  LEU   144      19.599  39.069  66.142  1.00  0.00              
ATOM    145  CA  SER   145      17.697  40.655  62.893  1.00  0.00              
ATOM    146  CA  ILE   146      16.235  43.783  62.923  1.00  0.00              
ATOM    147  CA  LEU   147      13.281  44.831  60.061  1.00  0.00              
ATOM    148  CA  GLU   148      12.285  48.306  59.807  1.00  0.00              
ATOM    149  CA  TRP   149      10.100  49.645  57.130  1.00  0.00              
ATOM    150  CA  SER   150      11.954  52.934  56.653  1.00  0.00              
ATOM    151  CA  PRO   151      12.751  53.683  53.121  1.00  0.00              
ATOM    152  CA  GLU   152      16.562  53.366  53.132  1.00  0.00              
ATOM    153  CA  GLU   153      16.957  51.507  49.883  1.00  0.00              
ATOM    154  CA  GLY   154      18.525  48.303  51.234  1.00  0.00              
ATOM    155  CA  ASP   155      18.401  45.481  48.633  1.00  0.00              
ATOM    156  CA  TYR   156      18.273  42.703  50.280  1.00  0.00              
ATOM    157  CA  PRO   157      18.744  39.329  48.151  1.00  0.00              
ATOM    158  CA  LEU   158      16.434  36.661  48.897  1.00  0.00              
ATOM    159  CA  PRO   159      19.071  34.195  49.747  1.00  0.00              
ATOM    160  CA  ALA   160      20.480  36.408  52.454  1.00  0.00              
ATOM    161  CA  SER   161      17.115  37.160  54.019  1.00  0.00              
ATOM    162  CA  GLU   162      16.127  33.413  54.373  1.00  0.00              
ATOM    163  CA  PHE   163      19.566  32.556  55.839  1.00  0.00              
ATOM    164  CA  ILE   164      19.374  35.379  58.313  1.00  0.00              
ATOM    165  CA  LEU   165      15.876  34.531  59.492  1.00  0.00              
ATOM    166  CA  PRO   166      16.846  30.915  60.023  1.00  0.00              
ATOM    167  CA  GLU   167      19.771  31.726  62.333  1.00  0.00              
ATOM    168  CA  CYS   168      18.256  34.562  64.311  1.00  0.00              
ATOM    169  CA  ASP   169      17.250  34.095  67.837  1.00  0.00              
ATOM    170  CA  TYR   170      14.952  37.448  68.213  1.00  0.00              
ATOM    171  CA  VAL   171      13.632  38.750  65.201  1.00  0.00              
ATOM    172  CA  TYR   172      12.172  42.875  65.744  1.00  0.00              
ATOM    173  CA  ILE   173       9.606  43.711  62.966  1.00  0.00              
ATOM    174  CA  THR   174       8.520  47.242  62.875  1.00  0.00              
ATOM    175  CA  CYS   175       5.532  47.779  60.804  1.00  0.00              
ATOM    176  CA  ALA   176       4.018  50.858  61.875  1.00  0.00              
ATOM    177  CA  SER   177       0.809  49.299  63.207  1.00  0.00              
ATOM    178  CA  VAL   178       2.383  46.385  64.872  1.00  0.00              
ATOM    179  CA  VAL   179       5.112  48.265  66.792  1.00  0.00              
ATOM    180  CA  ASP   180       3.608  51.557  67.821  1.00  0.00              
ATOM    181  CA  LYS   181       0.120  50.402  68.634  1.00  0.00              
ATOM    182  CA  THR   182       1.248  47.154  69.915  1.00  0.00              
ATOM    183  CA  LEU   183       3.256  47.909  72.691  1.00  0.00              
ATOM    184  CA  PRO   184       1.728  45.496  74.617  1.00  0.00              
ATOM    185  CA  ARG   185       2.390  43.052  72.224  1.00  0.00              
ATOM    186  CA  LEU   186       5.804  43.760  72.033  1.00  0.00              
ATOM    187  CA  LEU   187       6.160  43.219  75.604  1.00  0.00              
ATOM    188  CA  GLU   188       4.641  40.122  75.619  1.00  0.00              
ATOM    189  CA  LEU   189       7.040  38.805  73.054  1.00  0.00              
ATOM    190  CA  SER   190      10.146  40.018  74.966  1.00  0.00              
ATOM    191  CA  ARG   191       9.076  38.443  78.205  1.00  0.00              
ATOM    192  CA  ASN   192       8.242  35.062  76.787  1.00  0.00              
ATOM    193  CA  ALA   193      11.321  34.354  74.709  1.00  0.00              
ATOM    194  CA  ARG   194       9.591  33.256  71.495  1.00  0.00              
ATOM    195  CA  ARG   195      10.875  34.509  68.644  1.00  0.00              
ATOM    196  CA  ILE   196       8.975  37.610  66.587  1.00  0.00              
ATOM    197  CA  THR   197       9.326  38.088  63.235  1.00  0.00              
ATOM    198  CA  LEU   198       8.653  41.869  61.894  1.00  0.00              
ATOM    199  CA  VAL   199       7.904  42.770  58.515  1.00  0.00              
ATOM    200  CA  GLY   200       7.770  46.119  57.284  1.00  0.00              
ATOM    201  CA  PRO   201       7.827  47.102  53.583  1.00  0.00              
ATOM    202  CA  GLY   202      11.148  48.679  52.854  1.00  0.00              
ATOM    203  CA  THR   203      12.982  47.269  49.860  1.00  0.00              
ATOM    204  CA  PRO   204      13.094  43.500  50.442  1.00  0.00              
ATOM    205  CA  LEU   205       9.757  42.469  51.862  1.00  0.00              
ATOM    206  CA  ALA   206       7.523  44.627  49.659  1.00  0.00              
ATOM    207  CA  PRO   207       9.212  43.733  46.356  1.00  0.00              
ATOM    208  CA  VAL   208       8.965  40.034  47.078  1.00  0.00              
ATOM    209  CA  LEU   209       5.382  40.337  47.959  1.00  0.00              
ATOM    210  CA  PHE   210       4.460  42.249  44.955  1.00  0.00              
ATOM    211  CA  GLU   211       6.186  39.899  42.629  1.00  0.00              
ATOM    212  CA  HIS   212       4.365  36.983  44.224  1.00  0.00              
ATOM    213  CA  GLY   213       0.942  38.545  43.930  1.00  0.00              
ATOM    214  CA  LEU   214       0.389  39.724  47.433  1.00  0.00              
ATOM    215  CA  GLN   215      -1.852  42.705  47.436  1.00  0.00              
ATOM    216  CA  GLU   216      -0.753  45.143  49.943  1.00  0.00              
ATOM    217  CA  LEU   217       0.449  44.267  53.452  1.00  0.00              
ATOM    218  CA  SER   218      -0.114  46.796  55.971  1.00  0.00              
ATOM    219  CA  GLY   219       2.069  46.108  58.681  1.00  0.00              
ATOM    220  CA  PHE   220       2.831  42.427  59.168  1.00  0.00              
ATOM    221  CA  MET   221       3.658  41.058  62.433  1.00  0.00              
ATOM    222  CA  VAL   222       4.476  37.146  62.802  1.00  0.00              
ATOM    223  CA  LYS   223       3.988  35.757  66.040  1.00  0.00              
ATOM    224  CA  ASP   224       4.636  32.226  66.788  1.00  0.00              
ATOM    225  CA  ASN   225       8.323  31.237  66.735  1.00  0.00              
ATOM    226  CA  ALA   226       7.639  27.888  65.582  1.00  0.00              
ATOM    227  CA  ARG   227       5.645  28.984  62.543  1.00  0.00              
ATOM    228  CA  ALA   228       8.195  31.431  61.354  1.00  0.00              
ATOM    229  CA  PHE   229      10.962  28.999  61.651  1.00  0.00              
ATOM    230  CA  ARG   230       9.149  26.199  59.778  1.00  0.00              
ATOM    231  CA  ILE   231       8.296  28.562  56.997  1.00  0.00              
ATOM    232  CA  VAL   232      11.921  29.661  56.817  1.00  0.00              
ATOM    233  CA  ALA   233      13.526  26.285  57.024  1.00  0.00              
ATOM    234  CA  GLY   234      11.452  24.622  54.349  1.00  0.00              
ATOM    235  CA  ALA   235      11.919  27.454  51.844  1.00  0.00              
ATOM    236  CA  GLU   236       8.279  28.529  52.048  1.00  0.00              
ATOM    237  CA  LYS   237       8.371  32.300  51.916  1.00  0.00              
ATOM    238  CA  VAL   238       6.409  33.530  48.788  1.00  0.00              
ATOM    239  CA  LYS   239       3.485  31.053  49.234  1.00  0.00              
ATOM    240  CA  ILE   240       3.038  31.870  52.914  1.00  0.00              
ATOM    241  CA  TYR   241       3.069  35.638  52.460  1.00  0.00              
ATOM    242  CA  SER   242       0.514  35.618  49.557  1.00  0.00              
ATOM    243  CA  ALA   243      -2.052  33.504  51.451  1.00  0.00              
ATOM    244  CA  GLY   244      -1.960  35.717  54.578  1.00  0.00              
ATOM    245  CA  GLN   245      -1.976  39.009  52.742  1.00  0.00              
ATOM    246  CA  LYS   246      -3.563  42.075  54.016  1.00  0.00              
ATOM    247  CA  VAL   247      -4.832  44.793  51.723  1.00  0.00              
ATOM    248  CA  THR   248      -4.558  48.451  52.828  1.00  0.00              
ATOM    249  CA  ILE   249      -6.096  51.015  50.809  1.00  0.00              
ATOM    250  CA  LYS   250      -5.071  53.629  47.903  1.00  0.00              
ATOM    251  CA  LYS   251      -4.951  55.547  44.820  1.00  0.00              
TER                                                                             
END
