
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  101 (  101),  selected  101 , name T0304TS168_3-D1
# Molecule2: number of CA atoms  101 (  799),  selected  101 , name T0304_D1.pdb
# PARAMETERS: T0304TS168_3-D1.T0304_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    39        51 - 89          4.95    14.84
  LONGEST_CONTINUOUS_SEGMENT:    39        52 - 90          4.83    14.51
  LCS_AVERAGE:     28.11

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    23        56 - 78          1.99    16.08
  LCS_AVERAGE:     11.63

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    16        63 - 78          0.86    16.10
  LCS_AVERAGE:      6.59

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  101
LCS_GDT     R      17     R      17      5   11   15     3    4    6    8   10   11   11   11   11   12   12   18   19   27   27   31   35   39   41   43 
LCS_GDT     P      18     P      18      6   11   15     3    5    6    8   10   11   11   11   11   12   15   15   19   24   28   31   35   39   42   46 
LCS_GDT     W      19     W      19      6   11   15     3    5    6    8   10   11   11   11   11   14   16   16   19   24   28   32   34   39   43   46 
LCS_GDT     W      20     W      20      6   11   15     3    5    6    8   10   11   11   12   13   14   16   16   17   19   20   27   33   35   40   44 
LCS_GDT     G      21     G      21      6   11   15     3    4    6    8   10   11   11   12   13   14   16   16   17   19   20   29   33   35   40   46 
LCS_GDT     L      22     L      22      6   11   15     3    5    6    8   10   11   11   12   13   14   16   16   17   19   21   26   37   39   44   46 
LCS_GDT     P      23     P      23      6   11   15     3    5    6    8   10   11   11   12   14   17   19   24   27   30   33   38   39   42   44   46 
LCS_GDT     C      24     C      24      5   11   15     3    4    5    8   10   11   11   14   16   19   20   24   27   30   33   38   39   42   44   46 
LCS_GDT     T      25     T      25      4   11   15     3    3    5    8   10   11   11   12   15   18   19   21   23   28   31   33   35   35   44   45 
LCS_GDT     V      26     V      26      4   11   15     3    3    5    8   10   11   11   12   13   14   16   19   23   25   31   33   35   35   44   45 
LCS_GDT     T      27     T      27      4   11   15     3    3    5    8   10   11   11   12   13   14   16   19   21   21   24   26   32   39   44   46 
LCS_GDT     P      28     P      28      4    9   15     3    3    4    8    9   10   11   12   13   14   16   19   21   21   24   26   32   39   44   46 
LCS_GDT     C      29     C      29      3    9   15     3    3    3    7    9   10   11   12   15   19   23   25   28   32   35   38   42   44   48   52 
LCS_GDT     F      30     F      30      3    9   15     3    3    5    8    9   10   12   15   18   20   24   29   31   34   38   41   46   50   52   53 
LCS_GDT     G      31     G      31      3    5   15     3    3    3    4    5    7    9   16   19   22   28   32   37   40   44   46   49   51   52   53 
LCS_GDT     A      32     A      32      3    4   14     3    3    5    6    6    6    6    8   10   13   30   35   39   42   46   47   49   51   52   53 
LCS_GDT     R      33     R      33      3    3   12     3    3    5    6    6   12   19   24   29   33   34   36   39   42   46   47   49   51   52   53 
LCS_GDT     L      34     L      34      3    3   12     3    3    5    7    9   12   16   23   26   30   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     V      35     V      35      3    3   12     3    4    4    5    5    5    6    8   11   14   19   23   27   34   37   42   43   47   52   56 
LCS_GDT     Q      36     Q      36      3    4   15     3    4    4    5    5    5    9   11   14   17   21   22   25   30   32   36   41   45   51   56 
LCS_GDT     E      37     E      37      3    5   15     3    4    4    4    5    5    7    9   11   17   22   24   28   30   33   38   43   44   52   56 
LCS_GDT     G      38     G      38      3    5   15     3    3    4    4    5    5    6    8   10   11   12   14   21   24   27   29   31   34   41   44 
LCS_GDT     N      39     N      39      3    5   15     3    4    4    4    5    5    6    7    9   11   12   13   21   22   26   29   33   36   41   46 
LCS_GDT     R      40     R      40      3    5   15     3    4    4    4    5    5    7    9   11   14   20   22   23   27   29   33   35   41   44   46 
LCS_GDT     L      41     L      41      3    5   15     0    4    4    4    5    6    9   15   15   17   21   22   27   34   39   41   43   47   52   55 
LCS_GDT     H      42     H      42      3    3   37     0    3    4    4    4    5    9   15   15   17   21   22   28   30   32   38   43   44   50   54 
LCS_GDT     Y      43     Y      43      3    3   37     1    3    4    4    4    7   10   15   15   20   25   29   35   36   39   41   44   49   52   56 
LCS_GDT     L      44     L      44      5    6   37     5    5    5    6    6    7   17   21   25   27   29   33   35   36   39   41   44   49   52   56 
LCS_GDT     A      45     A      45      5    6   37     5    5    5    6    6    8    9   15   17   24   27   32   35   36   39   41   44   49   52   56 
LCS_GDT     D      46     D      46      5    6   37     5    5    5    6    6    8   11   15   15   18   23   26   35   36   39   41   44   49   52   56 
LCS_GDT     R      47     R      47      5    6   37     5    5    5    6    9   10   17   20   24   27   29   33   35   36   39   41   44   49   52   56 
LCS_GDT     A      48     A      48      5    6   37     5    5    5    9   12   14   17   23   25   27   29   33   35   36   39   41   44   49   52   56 
LCS_GDT     G      49     G      49      3    7   37     3    3    4    6    8   12   19   23   25   27   29   33   35   36   39   41   44   49   52   56 
LCS_GDT     I      50     I      50      3    7   38     3    3    4    6    8   13   19   23   25   27   29   33   35   36   39   42   44   49   52   56 
LCS_GDT     R      51     R      51      3    7   39     3    3    5    6    8    9   14   23   25   27   29   33   35   36   39   41   45   49   52   56 
LCS_GDT     G      52     G      52      4   15   39     3    3    4    6    8   11   21   24   26   28   29   34   38   41   43   47   49   50   52   56 
LCS_GDT     L      53     L      53      4   18   39     3    3    6   13   16   19   24   25   26   29   32   36   39   42   46   47   49   50   52   56 
LCS_GDT     F      54     F      54      4   19   39     3    5   10   16   19   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     S      55     S      55      4   19   39     3    3    5    7   12   13   21   26   29   33   34   36   39   42   46   47   49   51   52   53 
LCS_GDT     D      56     D      56     13   23   39     9   11   12   16   19   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     A      57     A      57     13   23   39     9   11   12   16   18   22   24   25   27   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     D      58     D      58     13   23   39     9   11   12   16   18   22   24   25   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     A      59     A      59     13   23   39     9   11   12   17   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     Y      60     Y      60     13   23   39     9   11   12   16   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     H      61     H      61     13   23   39     9   11   12   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     L      62     L      62     13   23   39     9   11   13   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     D      63     D      63     16   23   39     9   11   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     Q      64     Q      64     16   23   39     9   11   12   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     A      65     A      65     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     F      66     F      66     16   23   39    14   15   15   18   20   21   24   26   29   33   33   36   39   42   46   47   49   51   52   56 
LCS_GDT     P      67     P      67     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     L      68     L      68     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     L      69     L      69     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     M      70     M      70     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     K      71     K      71     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     Q      72     Q      72     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     L      73     L      73     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     E      74     E      74     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     L      75     L      75     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     M      76     M      76     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     L      77     L      77     16   23   39    14   15   15   18   20   22   24   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     T      78     T      78     16   23   39    14   15   15   18   20   21   24   26   29   33   34   36   39   42   46   47   49   51   52   55 
LCS_GDT     S      79     S      79      3   19   39     3    3    4    7    9   14   20   22   27   29   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     G      80     G      80      3   16   39     3    3    3    4    8   16   20   22   26   28   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     E      81     E      81      3    8   39     3    3    3    5    7    9   11   13   18   21   31   34   39   42   46   47   49   51   52   56 
LCS_GDT     L      82     L      82      6    8   39     3    6    6    7    8   14   20   21   25   28   32   36   39   42   46   47   49   51   52   56 
LCS_GDT     N      83     N      83      6    8   39     3    6    6    7    9   16   20   21   24   30   31   34   39   42   46   47   49   51   52   55 
LCS_GDT     P      84     P      84      6    9   39     3    6    6    7    8   11   13   14   17   21   23   25   28   31   36   41   45   51   52   53 
LCS_GDT     R      85     R      85      6    9   39     3    6    6   10   18   20   22   22   26   30   31   34   37   41   43   47   49   51   52   55 
LCS_GDT     H      86     H      86      6    9   39     3   15   15   17   19   20   22   23   27   30   32   36   39   42   46   47   49   51   52   56 
LCS_GDT     Q      87     Q      87      6    9   39     3    6    6   12   17   18   22   23   27   30   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     H      88     H      88      4    9   39     3    6    7   11   15   20   23   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     T      89     T      89      5    9   39     3    6    7   11   15   19   23   25   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     V      90     V      90      5    9   39     3    4    6    8   10   12   14   19   21   33   33   35   39   42   45   47   49   51   52   55 
LCS_GDT     T      91     T      91      5    9   36     3    4    6    8    9   11   14   16   17   19   23   25   37   38   41   42   44   46   52   53 
LCS_GDT     L      92     L      92      5    9   26     3    4    6    8   10   12   14   16   17   18   23   25   27   29   33   35   39   42   46   46 
LCS_GDT     Y      93     Y      93      5    8   26     3    4    6    8   10   12   14   16   17   18   23   25   27   29   31   35   37   42   44   46 
LCS_GDT     A      94     A      94      5   10   26     3    4    6    8    9   12   14   16   17   18   23   25   27   29   31   35   38   42   45   53 
LCS_GDT     K      95     K      95      5   10   26     3    3    6    8   10   12   14   16   17   18   23   25   27   29   31   35   37   40   45   53 
LCS_GDT     G      96     G      96      5   10   26     3    4    6    8   10   12   14   16   17   18   23   25   27   29   31   35   38   42   44   46 
LCS_GDT     L      97     L      97      5   10   26     3    4    5    8   10   12   14   16   18   20   24   29   32   36   41   46   49   51   52   53 
LCS_GDT     T      98     T      98      5   10   26     3    4    5    8    9   12   14   16   21   25   28   35   39   42   46   47   49   51   52   53 
LCS_GDT     C      99     C      99      5   10   26     3    4    5    6    9   13   19   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     K     100     K     100      4   10   26     2    3    5    8   10   13   15   26   29   33   33   36   39   42   46   47   49   51   52   53 
LCS_GDT     A     101     A     101      4   10   26     3    3    6    8   10   13   15   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     D     102     D     102      4   10   24     3    4    6    8   10   12   15   18   23   26   33   35   38   42   46   47   49   51   52   56 
LCS_GDT     T     103     T     103      4   10   20     3    4    6    8   10   12   14   16   17   18   23   25   27   31   34   39   43   47   51   56 
LCS_GDT     L     104     L     104      4    5   20     3    4    6    6    6    6    9   12   13   17   21   22   25   28   32   34   43   46   51   54 
LCS_GDT     S     105     S     105      4    5   20     3    4    6    6    6    7    9   11   13   16   18   20   23   30   32   34   40   43   48   54 
LCS_GDT     S     106     S     106      3    5   20     3    4    4    4    5    7   10   15   18   23   26   29   32   36   39   41   44   49   52   56 
LCS_GDT     C     107     C     107      3    5   19     3    4    5    6    6    6    7    9   13   16   17   27   32   36   39   41   43   49   52   56 
LCS_GDT     D     108     D     108      3    5   19     3    3    3    4    5    7    9   11   13   16   17   33   35   36   39   41   44   49   52   55 
LCS_GDT     Y     109     Y     109      3    5   19     3    3    3    4    5    7    9   11   13   16   22   33   35   36   39   41   44   49   52   56 
LCS_GDT     V     110     V     110      3    7   19     3    4    5    6    7    7    9   14   22   27   29   33   35   36   39   43   45   49   52   56 
LCS_GDT     Y     111     Y     111      4    7   19     3    4    5    6    7    7    9   22   27   30   32   36   39   41   46   47   49   51   52   56 
LCS_GDT     L     112     L     112      4    7   19     3    4    5    6    7   19   23   26   29   33   34   36   39   42   46   47   49   51   52   56 
LCS_GDT     A     113     A     113      4    7   19     2    4    5    6    7    7    9   11   19   24   30   35   39   42   46   47   49   51   52   53 
LCS_GDT     V     114     V     114      4    7   19     3    4    5    6    7    7    9   14   18   20   24   29   37   38   41   46   47   51   52   53 
LCS_GDT     Y     115     Y     115      3    7   19     3    4    5    6    7    8   10   11   14   17   19   25   27   29   33   38   39   42   44   46 
LCS_GDT     P     116     P     116      3    7   19     3    3    4    7    7    7    9   11   15   18   19   20   23   28   31   33   37   39   40   44 
LCS_GDT     T     117     T     117      3    7   19     0    2    4    6    8    8    8   10   13   16   17   19   23   28   31   33   35   37   39   42 
LCS_AVERAGE  LCS_A:  15.44  (   6.59   11.63   28.11 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     14     15     15     18     20     22     24     26     29     33     34     36     39     42     46     47     49     51     52     56 
GDT PERCENT_CA  13.86  14.85  14.85  17.82  19.80  21.78  23.76  25.74  28.71  32.67  33.66  35.64  38.61  41.58  45.54  46.53  48.51  50.50  51.49  55.45
GDT RMS_LOCAL    0.17   0.37   0.37   1.22   1.52   2.00   2.12   2.63   2.85   3.25   3.71   3.81   4.09   4.33   4.85   4.90   5.21   5.51   5.78   7.28
GDT RMS_ALL_CA  16.51  16.42  16.42  16.30  15.89  15.29  15.32  14.30  14.34  14.36  14.25  14.26  14.25  14.27  14.23  14.23  14.25  14.22  14.29  16.30

#      Molecule1      Molecule2       DISTANCE
LGA    R      17      R      17         29.012
LGA    P      18      P      18         25.248
LGA    W      19      W      19         22.951
LGA    W      20      W      20         20.498
LGA    G      21      G      21         20.623
LGA    L      22      L      22         19.587
LGA    P      23      P      23         19.798
LGA    C      24      C      24         19.791
LGA    T      25      T      25         23.607
LGA    V      26      V      26         22.034
LGA    T      27      T      27         21.226
LGA    P      28      P      28         19.854
LGA    C      29      C      29         16.025
LGA    F      30      F      30         13.527
LGA    G      31      G      31          8.472
LGA    A      32      A      32          6.654
LGA    R      33      R      33          5.106
LGA    L      34      L      34          6.487
LGA    V      35      V      35         13.105
LGA    Q      36      Q      36         17.334
LGA    E      37      E      37         19.070
LGA    G      38      G      38         22.162
LGA    N      39      N      39         24.357
LGA    R      40      R      40         22.778
LGA    L      41      L      41         17.773
LGA    H      42      H      42         19.808
LGA    Y      43      Y      43         19.941
LGA    L      44      L      44         21.568
LGA    A      45      A      45         20.237
LGA    D      46      D      46         23.625
LGA    R      47      R      47         24.236
LGA    A      48      A      48         21.844
LGA    G      49      G      49         20.069
LGA    I      50      I      50         15.902
LGA    R      51      R      51         17.403
LGA    G      52      G      52         12.202
LGA    L      53      L      53          8.385
LGA    F      54      F      54          2.491
LGA    S      55      S      55          4.424
LGA    D      56      D      56          2.867
LGA    A      57      A      57          5.769
LGA    D      58      D      58          5.283
LGA    A      59      A      59          2.200
LGA    Y      60      Y      60          1.797
LGA    H      61      H      61          2.766
LGA    L      62      L      62          3.004
LGA    D      63      D      63          2.716
LGA    Q      64      Q      64          2.018
LGA    A      65      A      65          1.248
LGA    F      66      F      66          3.882
LGA    P      67      P      67          3.666
LGA    L      68      L      68          1.022
LGA    L      69      L      69          2.151
LGA    M      70      M      70          3.009
LGA    K      71      K      71          1.703
LGA    Q      72      Q      72          1.519
LGA    L      73      L      73          2.217
LGA    E      74      E      74          1.103
LGA    L      75      L      75          2.077
LGA    M      76      M      76          3.045
LGA    L      77      L      77          1.714
LGA    T      78      T      78          1.477
LGA    S      79      S      79          8.267
LGA    G      80      G      80          8.331
LGA    E      81      E      81          9.523
LGA    L      82      L      82          7.417
LGA    N      83      N      83          8.816
LGA    P      84      P      84         11.904
LGA    R      85      R      85         11.366
LGA    H      86      H      86          9.872
LGA    Q      87      Q      87          7.832
LGA    H      88      H      88          3.467
LGA    T      89      T      89          4.179
LGA    V      90      V      90          5.518
LGA    T      91      T      91         11.279
LGA    L      92      L      92         13.740
LGA    Y      93      Y      93         16.387
LGA    A      94      A      94         16.136
LGA    K      95      K      95         18.538
LGA    G      96      G      96         16.892
LGA    L      97      L      97         10.790
LGA    T      98      T      98          7.238
LGA    C      99      C      99          3.907
LGA    K     100      K     100          4.298
LGA    A     101      A     101          3.967
LGA    D     102      D     102          6.149
LGA    T     103      T     103         12.245
LGA    L     104      L     104         11.916
LGA    S     105      S     105         18.132
LGA    S     106      S     106         18.405
LGA    C     107      C     107         19.117
LGA    D     108      D     108         19.556
LGA    Y     109      Y     109         16.866
LGA    V     110      V     110         10.931
LGA    Y     111      Y     111          8.083
LGA    L     112      L     112          3.873
LGA    A     113      A     113          6.597
LGA    V     114      V     114         10.593
LGA    Y     115      Y     115         17.372
LGA    P     116      P     116         24.117
LGA    T     117      T     117         29.937

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  101  101    4.0     26    2.63    26.238    22.587     0.951

LGA_LOCAL      RMSD =  2.635  Number of atoms =   26  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 14.304  Number of atoms =  101 
Std_ALL_ATOMS  RMSD = 14.151  (standard rmsd on all 101 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =   0.251555 * X  +   0.119036 * Y  +   0.960495 * Z  +  43.985310
  Y_new =   0.134619 * X  +   0.978458 * Y  +  -0.156519 * Z  +  25.705353
  Z_new =  -0.958435 * X  +   0.168674 * Y  +   0.230112 * Z  +  45.152672 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   0.632537   -2.509056  [ DEG:    36.2417   -143.7583 ]
  Theta =   1.281466    1.860127  [ DEG:    73.4226    106.5774 ]
  Phi   =   0.491367   -2.650226  [ DEG:    28.1533   -151.8467 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0304TS168_3-D1                               
REMARK     2: T0304_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0304TS168_3-D1.T0304_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  101  101   4.0   26   2.63  22.587    14.15
REMARK  ---------------------------------------------------------- 
MOLECULE T0304TS168_3-D1
PFRMAT TS
TARGET T0304
MODEL 3
PARENT N/A
ATOM     17  CA  ARG    17      27.689  32.246  67.612  1.00 25.00           C
ATOM     18  CA  PRO    18      30.694  30.022  68.519  1.00 25.00           C
ATOM     19  CA  TRP    19      33.433  28.660  66.261  1.00 25.00           C
ATOM     20  CA  TRP    20      35.687  25.598  66.432  1.00 25.00           C
ATOM     21  CA  GLY    21      38.788  26.370  64.477  1.00 25.00           C
ATOM     22  CA  LEU    22      41.911  25.358  62.591  1.00 25.00           C
ATOM     23  CA  PRO    23      42.003  28.998  61.399  1.00 25.00           C
ATOM     24  CA  CYS    24      41.923  28.528  57.607  1.00 25.00           C
ATOM     25  CA  THR    25      43.163  32.178  57.399  1.00 25.00           C
ATOM     26  CA  VAL    26      42.609  32.618  53.653  1.00 25.00           C
ATOM     27  CA  THR    27      39.736  31.348  51.505  1.00 25.00           C
ATOM     28  CA  PRO    28      41.855  28.468  50.271  1.00 25.00           C
ATOM     29  CA  CYS    29      43.050  24.855  50.575  1.00 25.00           C
ATOM     30  CA  PHE    30      40.387  22.203  51.061  1.00 25.00           C
ATOM     31  CA  GLY    31      40.753  19.182  48.734  1.00 25.00           C
ATOM     32  CA  ALA    32      37.526  20.158  46.918  1.00 25.00           C
ATOM     33  CA  ARG    33      38.809  23.744  46.514  1.00 25.00           C
ATOM     34  CA  LEU    34      42.119  22.426  45.108  1.00 25.00           C
ATOM     35  CA  VAL    35      40.214  20.203  42.640  1.00 25.00           C
ATOM     36  CA  GLN    36      38.094  23.197  41.541  1.00 25.00           C
ATOM     37  CA  GLU    37      41.263  25.285  41.030  1.00 25.00           C
ATOM     38  CA  GLY    38      42.811  22.471  38.945  1.00 25.00           C
ATOM     39  CA  ASN    39      39.633  22.264  36.818  1.00 25.00           C
ATOM     40  CA  ARG    40      39.717  26.055  36.280  1.00 25.00           C
ATOM     41  CA  LEU    41      43.394  25.849  35.232  1.00 25.00           C
ATOM     42  CA  HIS    42      42.561  23.034  32.772  1.00 25.00           C
ATOM     43  CA  TYR    43      39.701  25.122  31.313  1.00 25.00           C
ATOM     44  CA  LEU    44      42.056  28.116  30.918  1.00 25.00           C
ATOM     45  CA  ALA    45      44.627  25.893  29.152  1.00 25.00           C
ATOM     46  CA  ASP    46      41.907  24.575  26.800  1.00 25.00           C
ATOM     47  CA  ARG    47      40.810  28.160  26.021  1.00 25.00           C
ATOM     48  CA  ALA    48      44.414  29.324  25.521  1.00 25.00           C
ATOM     49  CA  GLY    49      46.236  26.115  24.414  1.00 25.00           C
ATOM     50  CA  ILE    50      48.174  23.170  25.929  1.00 25.00           C
ATOM     51  CA  ARG    51      46.800  21.249  22.934  1.00 25.00           C
ATOM     52  CA  GLY    52      43.235  20.192  23.902  1.00 25.00           C
ATOM     53  CA  LEU    53      42.465  16.467  23.877  1.00 25.00           C
ATOM     54  CA  PHE    54      42.038  16.854  27.644  1.00 25.00           C
ATOM     55  CA  SER    55      42.575  13.128  27.937  1.00 25.00           C
ATOM     56  CA  ASP    56      46.090  12.110  27.061  1.00 25.00           C
ATOM     57  CA  ALA    57      49.913  12.315  27.037  1.00 25.00           C
ATOM     58  CA  ASP    58      49.733  16.015  26.065  1.00 25.00           C
ATOM     59  CA  ALA    59      47.253  16.666  28.910  1.00 25.00           C
ATOM     60  CA  TYR    60      49.576  14.882  31.377  1.00 25.00           C
ATOM     61  CA  HIS    61      52.531  16.993  30.158  1.00 25.00           C
ATOM     62  CA  LEU    62      50.463  20.187  30.597  1.00 25.00           C
ATOM     63  CA  ASP    63      49.508  19.109  34.146  1.00 25.00           C
ATOM     64  CA  GLN    64      53.189  18.432  34.958  1.00 25.00           C
ATOM     65  CA  ALA    65      54.147  21.886  33.610  1.00 25.00           C
ATOM     66  CA  PHE    66      51.415  23.507  35.750  1.00 25.00           C
ATOM     67  CA  PRO    67      52.688  21.632  38.838  1.00 25.00           C
ATOM     68  CA  LEU    68      56.259  22.805  38.108  1.00 25.00           C
ATOM     69  CA  LEU    69      55.028  26.415  37.756  1.00 25.00           C
ATOM     70  CA  MET    70      53.165  26.130  41.091  1.00 25.00           C
ATOM     71  CA  LYS    71      56.325  24.761  42.768  1.00 25.00           C
ATOM     72  CA  GLN    72      58.372  27.664  41.335  1.00 25.00           C
ATOM     73  CA  LEU    73      55.783  30.166  42.638  1.00 25.00           C
ATOM     74  CA  GLU    74      55.916  28.537  46.102  1.00 25.00           C
ATOM     75  CA  LEU    75      59.741  28.742  46.078  1.00 25.00           C
ATOM     76  CA  MET    76      59.560  32.442  45.106  1.00 25.00           C
ATOM     77  CA  LEU    77      57.080  33.094  47.951  1.00 25.00           C
ATOM     78  CA  THR    78      59.404  31.311  50.418  1.00 25.00           C
ATOM     79  CA  SER    79      58.447  30.531  54.001  1.00 25.00           C
ATOM     80  CA  GLY    80      61.308  32.854  54.800  1.00 25.00           C
ATOM     81  CA  GLU    81      59.521  36.217  54.281  1.00 25.00           C
ATOM     82  CA  LEU    82      58.107  37.849  51.109  1.00 25.00           C
ATOM     83  CA  ASN    83      58.092  41.644  51.376  1.00 25.00           C
ATOM     84  CA  PRO    84      56.060  43.590  53.977  1.00 25.00           C
ATOM     85  CA  ARG    85      54.063  45.413  51.293  1.00 25.00           C
ATOM     86  CA  HIS    86      54.393  43.423  48.101  1.00 25.00           C
ATOM     87  CA  GLN    87      51.090  41.504  48.605  1.00 25.00           C
ATOM     88  CA  HIS    88      48.519  38.742  48.174  1.00 25.00           C
ATOM     89  CA  THR    89      49.268  36.918  44.916  1.00 25.00           C
ATOM     90  CA  VAL    90      46.476  34.356  45.617  1.00 25.00           C
ATOM     91  CA  THR    91      46.416  31.291  47.881  1.00 25.00           C
ATOM     92  CA  LEU    92      46.484  27.509  48.056  1.00 25.00           C
ATOM     93  CA  TYR    93      49.031  24.707  47.902  1.00 25.00           C
ATOM     94  CA  ALA    94      51.418  22.048  46.635  1.00 25.00           C
ATOM     95  CA  LYS    95      51.742  18.599  45.118  1.00 25.00           C
ATOM     96  CA  GLY    96      49.622  18.885  41.962  1.00 25.00           C
ATOM     97  CA  LEU    97      47.783  21.472  39.914  1.00 25.00           C
ATOM     98  CA  THR    98      46.913  24.937  38.474  1.00 25.00           C
ATOM     99  CA  CYS    99      45.115  28.121  39.474  1.00 25.00           C
ATOM    100  CA  LYS   100      41.824  29.957  40.219  1.00 25.00           C
ATOM    101  CA  ALA   101      42.905  31.253  43.673  1.00 25.00           C
ATOM    102  CA  ASP   102      40.455  34.013  42.892  1.00 25.00           C
ATOM    103  CA  THR   103      36.901  35.049  41.904  1.00 25.00           C
ATOM    104  CA  LEU   104      36.619  32.013  39.685  1.00 25.00           C
ATOM    105  CA  SER   105      36.985  33.805  36.369  1.00 25.00           C
ATOM    106  CA  SER   106      39.859  36.258  36.931  1.00 25.00           C
ATOM    107  CA  CYS   107      43.024  34.350  37.962  1.00 25.00           C
ATOM    108  CA  ASP   108      46.634  33.497  37.011  1.00 25.00           C
ATOM    109  CA  TYR   109      48.266  30.390  35.535  1.00 25.00           C
ATOM    110  CA  VAL   110      50.839  30.086  38.342  1.00 25.00           C
ATOM    111  CA  TYR   111      50.124  31.015  42.020  1.00 25.00           C
ATOM    112  CA  LEU   112      48.516  27.732  43.125  1.00 25.00           C
ATOM    113  CA  ALA   113      47.128  24.219  43.713  1.00 25.00           C
ATOM    114  CA  VAL   114      46.626  20.876  45.456  1.00 25.00           C
ATOM    115  CA  TYR   115      45.988  18.501  48.358  1.00 25.00           C
ATOM    116  CA  PRO   116      48.167  17.635  51.315  1.00 25.00           C
ATOM    117  CA  THR   117      49.334  15.889  54.434  1.00 25.00           C
TER
END
