
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  122 (  122),  selected  107 , name T0304TS599_2
# Molecule2: number of CA atoms  107 (  848),  selected  107 , name T0304.pdb
# PARAMETERS: T0304TS599_2.T0304.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    44        48 - 91          4.91    12.63
  LONGEST_CONTINUOUS_SEGMENT:    44        49 - 92          4.84    12.81
  LCS_AVERAGE:     28.19

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    30        56 - 85          1.97    13.03
  LONGEST_CONTINUOUS_SEGMENT:    30        57 - 86          1.91    13.03
  LCS_AVERAGE:     14.74

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    22        63 - 84          0.91    13.88
  LONGEST_CONTINUOUS_SEGMENT:    22        64 - 85          0.89    14.09
  LCS_AVERAGE:      9.33

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  107
LCS_GDT     D      16     D      16      4    6   14     3    4    5    5    6    7    9   10   10   28   31   31   33   40   42   47   52   56   57   62 
LCS_GDT     R      17     R      17      4    6   15     3    4    5    6    6    7    9   10   12   28   31   34   38   45   47   51   54   56   63   66 
LCS_GDT     P      18     P      18      4    6   15     3    4    5    6    6    7   26   26   31   33   33   38   45   48   50   53   59   62   64   68 
LCS_GDT     W      19     W      19      4    6   15     3    4    5    6    6    6   26   30   33   37   38   43   47   49   53   58   60   62   65   68 
LCS_GDT     W      20     W      20      4    6   16     3    4    4    6    7    8   10   14   27   33   38   43   47   49   53   58   60   62   65   68 
LCS_GDT     G      21     G      21      4    6   16     3    4    4    6   15   16   21   26   31   35   41   43   47   49   53   58   60   62   65   68 
LCS_GDT     L      22     L      22      4    5   16     3    4    4   11   16   17   20   22   26   29   33   37   42   46   53   58   60   62   65   68 
LCS_GDT     P      23     P      23      4    5   16     3    3    4    4    6    9   10   20   23   29   33   37   45   48   53   57   60   62   65   68 
LCS_GDT     C      24     C      24      4    5   16     3    3    4    6   11   17   19   21   26   29   33   37   40   46   51   55   59   62   65   68 
LCS_GDT     T      25     T      25      4    5   16     3    4    5    6    7    9   10   13   20   20   30   35   43   48   53   57   59   62   65   68 
LCS_GDT     V      26     V      26      4    5   16     3    4    5    6    7    9   10   13   20   20   34   46   50   50   51   57   59   62   65   68 
LCS_GDT     T      27     T      27      4    5   16     3    4    5    6    7   12   15   15   20   20   27   35   50   50   53   57   59   62   65   68 
LCS_GDT     P      28     P      28      4    5   16     2    4    5    6    9   12   15   15   20   20   27   37   50   50   51   57   59   62   64   68 
LCS_GDT     C      29     C      29      3    4   16     3    3    4    4    4    8   15   15   20   20   27   35   50   50   51   57   59   62   65   68 
LCS_GDT     F      30     F      30      3    4   16     3    3    9   20   23   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     G      31     G      31      3    3   16     3    3    3   16   19   25   28   34   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     A      32     A      32      3    3   16     3    3    3    4   12   23   28   33   37   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     R      33     R      33      3    3   16     3    3    3    4    5    7   15   18   22   39   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     L      34     L      34      3    3   16     3    3    3    3    4    8   19   23   27   33   39   43   47   49   53   58   60   62   65   68 
LCS_GDT     V      35     V      35      3    3   16     3    4    4    4    4    6    9   10   16   23   28   36   42   47   53   58   60   62   65   68 
LCS_GDT     Q      36     Q      36      4    4   16     3    4    4    4    4    6    9   10   11   14   25   36   42   47   53   58   60   62   65   68 
LCS_GDT     E      37     E      37      4    4   16     3    4    4    4    4    5    6    8   11   13   24   31   37   45   51   56   60   62   64   68 
LCS_GDT     G      38     G      38      4    6   16     3    4    4    5    6    7    8    8   11   13   14   17   23   30   36   42   47   50   56   60 
LCS_GDT     N      39     N      39      5    6   16     3    4    5    5    6    7    8    9   11   13   15   18   21   26   30   36   40   45   48   51 
LCS_GDT     R      40     R      40      5    6   16     3    4    5    5    6    7    8    9   13   16   18   20   21   24   28   32   37   43   47   51 
LCS_GDT     L      41     L      41      5    6   23     3    4    5    5    6    7    8    9   14   16   18   20   21   24   28   32   37   43   47   51 
LCS_GDT     H      42     H      42      5    6   23     3    4    5    5    6    7    8    9   14   16   18   20   21   23   27   31   36   43   47   51 
LCS_GDT     Y      43     Y      43      5    6   23     3    4    5    5    6    7    8   10   13   16   17   18   20   23   24   27   32   35   40   47 
LCS_GDT     L      44     L      44      6    6   23     5    6    6    7    7    8    9   11   13   16   17   18   20   23   24   30   34   42   47   51 
LCS_GDT     A      45     A      45      6    6   24     5    6    6    7    7    8    9   11   13   16   20   32   39   44   50   56   60   62   64   68 
LCS_GDT     D      46     D      46      6    6   25     5    6    6    7    7    8   10   12   14   19   24   32   39   46   51   58   60   62   64   68 
LCS_GDT     R      47     R      47      6    6   27     5    6    6    7    7    8   10   11   14   16   18   21   23   30   32   41   44   50   53   60 
LCS_GDT     A      48     A      48      6    6   44     5    6    6    7    7    8   10   11   14   16   18   22   27   33   39   46   50   56   59   65 
LCS_GDT     G      49     G      49      6    6   44     0    3    5    7    7    8   12   15   19   23   28   35   42   46   52   58   60   62   65   68 
LCS_GDT     I      50     I      50      4   19   44     3    3   10   15   18   23   28   32   37   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     R      51     R      51      4   21   44     3    3    5    6    6   11   22   25   28   34   36   46   50   50   51   54   59   62   65   68 
LCS_GDT     G      52     G      52      3   21   44     3    4    4    7   16   20   23   26   30   34   43   46   50   50   53   57   59   62   65   68 
LCS_GDT     L      53     L      53     16   26   44    13   14   17   20   23   29   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     F      54     F      54     16   26   44    13   14   17   20   23   29   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     S      55     S      55     16   26   44    13   14   17   20   23   29   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     D      56     D      56     16   30   44    13   14   17   20   23   29   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     A      57     A      57     16   30   44    13   14   17   20   25   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     D      58     D      58     16   30   44    13   14   17   20   25   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     A      59     A      59     16   30   44    13   14   17   20   25   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     Y      60     Y      60     16   30   44    13   14   17   22   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     H      61     H      61     16   30   44    13   14   18   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     L      62     L      62     16   30   44    13   14   18   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     D      63     D      63     22   30   44    13   14   19   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     Q      64     Q      64     22   30   44    13   14   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     A      65     A      65     22   30   44    13   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     F      66     F      66     22   30   44    13   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     P      67     P      67     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     L      68     L      68     22   30   44    13   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     L      69     L      69     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     M      70     M      70     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     K      71     K      71     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     Q      72     Q      72     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     L      73     L      73     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     E      74     E      74     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     L      75     L      75     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     M      76     M      76     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     L      77     L      77     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     T      78     T      78     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     S      79     S      79     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     G      80     G      80     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     E      81     E      81     22   30   44    14   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     L      82     L      82     22   30   44     6   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     N      83     N      83     22   30   44     6   19   21   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     P      84     P      84     22   30   44     4    7   21   25   26   30   35   36   38   41   43   46   50   50   53   57   60   62   65   68 
LCS_GDT     R      85     R      85     22   30   44     7   11   17   25   26   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     H      86     H      86      6   30   44     4    5    6    8   22   30   35   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     Q      87     Q      87      7   25   44     3    6    7    8   11   11   12   15   17   19   38   45   50   50   51   54   57   61   65   68 
LCS_GDT     H      88     H      88      7   11   44     3    6    7    8   11   11   13   31   38   41   43   46   50   50   52   58   60   62   65   68 
LCS_GDT     T      89     T      89      7   11   44     3    6    9   15   19   26   30   36   38   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     V      90     V      90      7   11   44     3    6    7    8   11   11   12   24   27   33   36   40   45   49   51   58   60   62   65   68 
LCS_GDT     T      91     T      91      7   11   44     3    6    7    8   11   11   12   15   15   19   24   28   40   44   47   50   55   58   62   64 
LCS_GDT     L      92     L      92      7   11   44     3    6    7    8   11   11   12   15   15   19   21   27   29   34   37   39   41   43   45   48 
LCS_GDT     Y      93     Y      93      7   11   22     3    5    7    8   11   11   12   15   15   19   21   27   29   34   37   39   41   43   45   47 
LCS_GDT     A      94     A      94      6   11   22     3    5    7    8   11   11   12   13   15   19   21   27   29   34   37   39   41   43   45   46 
LCS_GDT     K      95     K      95      5   11   22     3    4    5    8   11   11   12   15   15   19   21   27   29   34   37   39   41   43   45   46 
LCS_GDT     G      96     G      96      6   11   22     3    5    6    8   11   11   12   15   15   17   19   25   28   34   37   39   41   44   48   51 
LCS_GDT     L      97     L      97      6   11   22     3    5    6    8   11   11   12   15   15   17   19   25   28   34   37   39   43   47   53   58 
LCS_GDT     T      98     T      98      6   10   23     3    5    6    7    8   11   12   16   24   32   37   41   44   48   53   58   60   62   64   68 
LCS_GDT     C      99     C      99      6    8   23     3    5    6    7    8   10   13   17   25   33   37   42   47   49   53   58   60   62   65   68 
LCS_GDT     K     100     K     100      6    8   23     3    5    6   19   20   24   30   36   37   41   43   46   50   50   53   58   60   62   65   68 
LCS_GDT     A     101     A     101      6    8   23     3    5    6    7    8   12   20   27   33   39   41   46   50   50   53   58   60   62   65   68 
LCS_GDT     D     102     D     102      3    8   23     3    3    5    5    8    8    9   11   17   18   24   31   37   45   53   57   59   61   65   68 
LCS_GDT     T     103     T     103      3    5   23     3    4    4    4    5    5   13   14   17   18   24   30   36   45   46   50   54   58   64   68 
LCS_GDT     L     104     L     104      3   15   23     3    3    4    4   10   13   17   17   17   19   28   37   40   46   53   57   59   61   65   68 
LCS_GDT     S     105     S     105      3   15   23     3    6    6   11   12   14   17   17   17   19   21   25   29   34   37   48   52   57   61   68 
LCS_GDT     S     106     S     106      3   15   23     3    4    4   10   11   14   17   17   17   19   21   27   29   34   37   39   41   44   54   56 
LCS_GDT     C     107     C     107      9   15   23     3    6   10   10   11   14   17   17   17   19   21   30   36   41   44   48   52   58   61   66 
LCS_GDT     D     108     D     108     10   15   23     3    9   10   11   12   14   17   17   17   18   21   30   36   45   46   50   54   58   64   66 
LCS_GDT     Y     109     Y     109     10   15   23     4    9   10   11   12   14   17   17   17   18   28   31   37   45   53   57   59   61   64   68 
LCS_GDT     V     110     V     110     10   15   23     4    9   10   11   18   20   21   23   26   31   38   42   47   49   53   58   60   62   65   68 
LCS_GDT     Y     111     Y     111     10   15   23     3    9   10   11   12   14   17   17   23   25   33   41   46   49   53   58   60   62   65   68 
LCS_GDT     L     112     L     112     10   15   23     3    9   10   11   12   14   17   17   17   25   29   37   46   49   53   58   60   62   65   68 
LCS_GDT     A     113     A     113     10   15   23     4    9   10   11   12   14   17   17   17   18   20   28   39   47   53   58   60   62   64   68 
LCS_GDT     V     114     V     114     10   15   23     4    9   10   11   12   14   17   17   17   18   20   25   29   34   37   39   48   52   59   64 
LCS_GDT     Y     115     Y     115     10   15   23     4    9   10   11   12   14   17   17   17   19   21   27   29   34   37   43   48   57   59   64 
LCS_GDT     P     116     P     116     10   15   23     4    9   10   11   12   14   17   17   17   19   21   25   29   34   37   39   41   45   49   55 
LCS_GDT     T     117     T     117     10   15   23     4    9   10   11   12   14   17   17   17   19   21   27   29   34   37   39   41   43   51   58 
LCS_GDT     P     118     P     118      5   15   23     4    5    6    8   12   14   17   17   17   18   18   20   26   30   37   39   41   49   55   60 
LCS_GDT     E     119     E     119      5   15   23     4    5    9   11   12   14   17   17   17   19   21   27   29   34   37   39   41   43   45   49 
LCS_GDT     M     120     M     120      3   13   23     2    3    3    4   11   14   17   17   17   19   20   27   29   34   37   39   41   43   45   53 
LCS_GDT     K     121     K     121      3    5   23     1    3    4    5    7   10   12   15   17   19   21   27   29   34   37   39   41   43   45   53 
LCS_GDT     N     122     N     122      3    5   23     0    3    3    4    7   10   12   15   17   19   21   27   29   34   37   39   41   43   45   46 
LCS_AVERAGE  LCS_A:  17.42  (   9.33   14.74   28.19 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     14     19     21     25     26     30     35     36     38     41     43     46     50     50     53     58     60     62     65     68 
GDT PERCENT_CA  13.08  17.76  19.63  23.36  24.30  28.04  32.71  33.64  35.51  38.32  40.19  42.99  46.73  46.73  49.53  54.21  56.07  57.94  60.75  63.55
GDT RMS_LOCAL    0.36   0.49   0.70   1.24   1.41   1.91   2.31   2.39   2.68   2.94   3.24   3.61   3.95   3.95   4.87   5.42   5.66   5.51   5.71   5.97
GDT RMS_ALL_CA  14.42  14.24  14.15  13.55  13.44  13.03  12.84  12.81  12.83  12.74  12.76  12.84  13.11  13.11  12.88  12.29  12.43  12.50  12.54  12.45

#      Molecule1      Molecule2       DISTANCE
LGA    D      16      D      16         13.976
LGA    R      17      R      17         11.305
LGA    P      18      P      18          9.539
LGA    W      19      W      19          5.803
LGA    W      20      W      20          8.907
LGA    G      21      G      21          7.277
LGA    L      22      L      22         10.620
LGA    P      23      P      23         10.431
LGA    C      24      C      24         11.103
LGA    T      25      T      25         11.358
LGA    V      26      V      26         10.252
LGA    T      27      T      27          9.768
LGA    P      28      P      28         10.161
LGA    C      29      C      29          9.562
LGA    F      30      F      30          2.922
LGA    G      31      G      31          5.681
LGA    A      32      A      32          6.339
LGA    R      33      R      33          6.432
LGA    L      34      L      34          9.130
LGA    V      35      V      35         12.065
LGA    Q      36      Q      36         11.856
LGA    E      37      E      37         14.149
LGA    G      38      G      38         19.571
LGA    N      39      N      39         22.310
LGA    R      40      R      40         23.877
LGA    L      41      L      41         22.341
LGA    H      42      H      42         22.629
LGA    Y      43      Y      43         23.038
LGA    L      44      L      44         20.736
LGA    A      45      A      45         14.716
LGA    D      46      D      46         14.926
LGA    R      47      R      47         19.296
LGA    A      48      A      48         16.259
LGA    G      49      G      49         11.281
LGA    I      50      I      50          6.233
LGA    R      51      R      51         10.552
LGA    G      52      G      52         10.041
LGA    L      53      L      53          3.903
LGA    F      54      F      54          3.444
LGA    S      55      S      55          3.408
LGA    D      56      D      56          2.401
LGA    A      57      A      57          1.552
LGA    D      58      D      58          1.736
LGA    A      59      A      59          0.998
LGA    Y      60      Y      60          0.720
LGA    H      61      H      61          1.231
LGA    L      62      L      62          1.589
LGA    D      63      D      63          1.825
LGA    Q      64      Q      64          2.879
LGA    A      65      A      65          3.518
LGA    F      66      F      66          3.342
LGA    P      67      P      67          2.913
LGA    L      68      L      68          2.240
LGA    L      69      L      69          2.246
LGA    M      70      M      70          2.066
LGA    K      71      K      71          1.140
LGA    Q      72      Q      72          0.657
LGA    L      73      L      73          1.100
LGA    E      74      E      74          0.223
LGA    L      75      L      75          1.150
LGA    M      76      M      76          1.600
LGA    L      77      L      77          0.769
LGA    T      78      T      78          1.953
LGA    S      79      S      79          2.909
LGA    G      80      G      80          3.038
LGA    E      81      E      81          3.409
LGA    L      82      L      82          2.829
LGA    N      83      N      83          2.707
LGA    P      84      P      84          3.124
LGA    R      85      R      85          0.226
LGA    H      86      H      86          2.841
LGA    Q      87      Q      87          7.622
LGA    H      88      H      88          7.375
LGA    T      89      T      89          6.944
LGA    V      90      V      90         11.069
LGA    T      91      T      91         14.231
LGA    L      92      L      92         19.221
LGA    Y      93      Y      93         22.208
LGA    A      94      A      94         26.850
LGA    K      95      K      95         27.719
LGA    G      96      G      96         21.187
LGA    L      97      L      97         16.717
LGA    T      98      T      98         10.322
LGA    C      99      C      99          7.339
LGA    K     100      K     100          3.942
LGA    A     101      A     101          5.960
LGA    D     102      D     102         10.651
LGA    T     103      T     103         13.163
LGA    L     104      L     104         10.244
LGA    S     105      S     105         13.508
LGA    S     106      S     106         16.614
LGA    C     107      C     107         15.411
LGA    D     108      D     108         12.914
LGA    Y     109      Y     109         11.105
LGA    V     110      V     110          8.075
LGA    Y     111      Y     111          8.697
LGA    L     112      L     112          8.848
LGA    A     113      A     113         10.238
LGA    V     114      V     114         14.954
LGA    Y     115      Y     115         15.693
LGA    P     116      P     116         20.727
LGA    T     117      T     117         21.843
LGA    P     118      P     118         21.825
LGA    E     119      E     119         26.644
LGA    M     120      M     120         26.393
LGA    K     121      K     121         25.475
LGA    N     122      N     122         31.215

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  122  107    4.0     36    2.39    32.243    27.850     1.444

LGA_LOCAL      RMSD =  2.394  Number of atoms =   36  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 12.813  Number of atoms =  107 
Std_ALL_ATOMS  RMSD = 11.495  (standard rmsd on all 107 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.067214 * X  +   0.035005 * Y  +   0.997124 * Z  +  40.700302
  Y_new =  -0.910161 * X  +   0.407287 * Y  +  -0.075651 * Z  +  25.884600
  Z_new =  -0.408764 * X  +  -0.912629 * Y  +   0.004484 * Z  +  41.628372 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -1.565883    1.575710  [ DEG:   -89.7185     90.2815 ]
  Theta =   0.421100    2.720493  [ DEG:    24.1272    155.8728 ]
  Phi   =  -1.644511    1.497081  [ DEG:   -94.2236     85.7764 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0304TS599_2                                  
REMARK     2: T0304.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0304TS599_2.T0304.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  122  107   4.0   36   2.39  27.850    11.49
REMARK  ---------------------------------------------------------- 
MOLECULE T0304TS599_2
PFRMAT TS                                                                       
TARGET T0304                                                                    
MODEL  2                                                                        
PARENT N/A                                                                      
ATOM      1  CA  MET     1      43.754  29.824  63.891  1.00  0.00              
ATOM      2  CA  SER     2      45.066  28.299  60.623  1.00  0.00              
ATOM      3  CA  ASP     3      42.099  29.504  62.266  1.00  0.00              
ATOM      4  CA  THR     4      43.888  32.911  62.256  1.00  0.00              
ATOM      5  CA  LEU     5      44.336  33.015  58.435  1.00  0.00              
ATOM      6  CA  PRO     6      40.905  32.375  57.019  1.00  0.00              
ATOM      7  CA  GLY     7      40.578  35.213  54.583  1.00  0.00              
ATOM      8  CA  THR     8      38.942  33.366  51.694  1.00  0.00              
ATOM      9  CA  THR     9      36.054  35.038  50.248  1.00  0.00              
ATOM     10  CA  LEU    10      33.187  32.916  49.046  1.00  0.00              
ATOM     11  CA  PRO    11      30.232  34.911  47.919  1.00  0.00              
ATOM     12  CA  ASP    12      26.834  33.981  49.220  1.00  0.00              
ATOM     13  CA  ASP    13      25.026  33.549  45.914  1.00  0.00              
ATOM     14  CA  ASN    14      22.304  31.186  46.972  1.00  0.00              
ATOM     15  CA  HIS    15      22.935  28.539  44.374  1.00  0.00              
ATOM     16  CA  ASP    16      22.350  25.446  46.439  1.00  0.00              
ATOM     17  CA  ARG    17      25.802  24.060  46.820  1.00  0.00              
ATOM     18  CA  PRO    18      27.975  27.034  47.439  1.00  0.00              
ATOM     19  CA  TRP    19      31.346  25.551  46.390  1.00  0.00              
ATOM     20  CA  TRP    20      30.494  24.136  42.999  1.00  0.00              
ATOM     21  CA  GLY    21      33.682  24.576  41.044  1.00  0.00              
ATOM     22  CA  LEU    22      34.041  21.907  38.379  1.00  0.00              
ATOM     23  CA  PRO    23      35.326  22.760  35.043  1.00  0.00              
ATOM     24  CA  CYS    24      33.253  20.819  32.567  1.00  0.00              
ATOM     25  CA  THR    25      36.167  19.385  30.554  1.00  0.00              
ATOM     26  CA  VAL    26      38.241  17.908  33.359  1.00  0.00              
ATOM     27  CA  THR    27      41.904  16.938  33.075  1.00  0.00              
ATOM     28  CA  PRO    28      43.034  14.440  35.761  1.00  0.00              
ATOM     29  CA  CYS    29      46.115  16.389  36.821  1.00  0.00              
ATOM     30  CA  PHE    30      43.872  19.461  37.433  1.00  0.00              
ATOM     31  CA  GLY    31      41.097  17.518  39.171  1.00  0.00              
ATOM     32  CA  ALA    32      43.510  16.283  41.867  1.00  0.00              
ATOM     33  CA  ARG    33      44.509  19.901  42.507  1.00  0.00              
ATOM     34  CA  LEU    34      40.859  21.001  42.823  1.00  0.00              
ATOM     35  CA  VAL    35      40.048  18.171  45.299  1.00  0.00              
ATOM     36  CA  GLN    36      43.112  19.059  47.278  1.00  0.00              
ATOM     37  CA  GLU    37      42.181  22.762  47.559  1.00  0.00              
ATOM     38  CA  GLY    38      38.734  22.059  48.897  1.00  0.00              
ATOM     39  CA  ASN    39      36.619  23.233  46.000  1.00  0.00              
ATOM     40  CA  ARG    40      33.790  20.771  45.509  1.00  0.00              
ATOM     41  CA  LEU    41      32.839  20.014  41.926  1.00  0.00              
ATOM     42  CA  HIS    42      30.975  16.751  42.100  1.00  0.00              
ATOM     43  CA  TYR    43      28.069  16.450  39.645  1.00  0.00              
ATOM     44  CA  LEU    44      29.915  17.538  36.475  1.00  0.00              
ATOM     45  CA  ALA    45      33.056  15.604  37.340  1.00  0.00              
ATOM     46  CA  ASP    46      31.141  12.334  37.868  1.00  0.00              
ATOM     47  CA  ARG    47      29.159  12.347  34.676  1.00  0.00              
ATOM     48  CA  ALA    48      32.247  12.654  32.534  1.00  0.00              
ATOM     49  CA  GLY    49      34.378  10.196  34.563  1.00  0.00              
ATOM     50  CA  ILE    50      37.081  12.586  35.821  1.00  0.00              
ATOM     51  CA  ARG    51      40.042  10.474  34.640  1.00  0.00              
ATOM     52  CA  GLY    52      38.541   9.529  31.267  1.00  0.00              
ATOM     53  CA  LEU    53      37.370  12.962  30.106  1.00  0.00              
ATOM     54  CA  PHE    54      40.580  14.482  28.926  1.00  0.00              
ATOM     55  CA  SER    55      42.385  13.693  25.693  1.00  0.00              
ATOM     56  CA  ASP    56      45.911  12.409  26.548  1.00  0.00              
ATOM     57  CA  ALA    57      47.616  15.546  25.227  1.00  0.00              
ATOM     58  CA  ASP    58      45.557  17.777  27.482  1.00  0.00              
ATOM     59  CA  ALA    59      46.355  15.664  30.540  1.00  0.00              
ATOM     60  CA  TYR    60      50.057  15.962  29.984  1.00  0.00              
ATOM     61  CA  HIS    61      49.884  19.761  29.395  1.00  0.00              
ATOM     62  CA  LEU    62      47.761  20.492  32.473  1.00  0.00              
ATOM     63  CA  ASP    63      49.986  18.403  34.790  1.00  0.00              
ATOM     64  CA  GLN    64      53.103  20.121  33.553  1.00  0.00              
ATOM     65  CA  ALA    65      51.686  23.625  33.982  1.00  0.00              
ATOM     66  CA  PHE    66      50.423  23.102  37.540  1.00  0.00              
ATOM     67  CA  PRO    67      53.598  21.668  38.918  1.00  0.00              
ATOM     68  CA  LEU    68      55.603  24.577  37.435  1.00  0.00              
ATOM     69  CA  LEU    69      53.161  27.118  38.875  1.00  0.00              
ATOM     70  CA  MET    70      53.182  25.540  42.301  1.00  0.00              
ATOM     71  CA  LYS    71      56.980  25.468  42.424  1.00  0.00              
ATOM     72  CA  GLN    72      57.277  29.093  41.425  1.00  0.00              
ATOM     73  CA  LEU    73      54.778  29.999  44.077  1.00  0.00              
ATOM     74  CA  GLU    74      56.692  28.007  46.738  1.00  0.00              
ATOM     75  CA  LEU    75      59.899  29.869  45.925  1.00  0.00              
ATOM     76  CA  MET    76      58.034  33.206  46.211  1.00  0.00              
ATOM     77  CA  LEU    77      56.477  32.186  49.578  1.00  0.00              
ATOM     78  CA  THR    78      59.823  31.099  51.040  1.00  0.00              
ATOM     79  CA  SER    79      61.439  34.410  49.908  1.00  0.00              
ATOM     80  CA  GLY    80      58.834  36.595  51.482  1.00  0.00              
ATOM     81  CA  GLU    81      57.241  38.054  48.420  1.00  0.00              
ATOM     82  CA  LEU    82      53.850  36.665  49.280  1.00  0.00              
ATOM     83  CA  ASN    83      52.726  37.604  52.804  1.00  0.00              
ATOM     84  CA  PRO    84      51.032  35.429  55.378  1.00  0.00              
ATOM     85  CA  ARG    85      47.510  36.855  54.847  1.00  0.00              
ATOM     86  CA  HIS    86      47.803  36.398  51.102  1.00  0.00              
ATOM     87  CA  GLN    87      49.053  32.769  51.117  1.00  0.00              
ATOM     88  CA  HIS    88      46.813  31.608  48.482  1.00  0.00              
ATOM     89  CA  THR    89      43.687  33.717  48.711  1.00  0.00              
ATOM     90  CA  VAL    90      40.598  32.217  47.253  1.00  0.00              
ATOM     91  CA  THR    91      37.823  34.362  45.897  1.00  0.00              
ATOM     92  CA  LEU    92      34.557  32.837  44.871  1.00  0.00              
ATOM     93  CA  TYR    93      32.440  34.694  42.347  1.00  0.00              
ATOM     94  CA  ALA    94      28.927  33.685  41.657  1.00  0.00              
ATOM     95  CA  LYS    95      28.455  34.657  38.074  1.00  0.00              
ATOM     96  CA  GLY    96      31.606  33.886  36.349  1.00  0.00              
ATOM     97  CA  LEU    97      35.152  34.916  37.290  1.00  0.00              
ATOM     98  CA  THR    98      37.772  32.386  36.360  1.00  0.00              
ATOM     99  CA  CYS    99      41.281  32.619  37.685  1.00  0.00              
ATOM    100  CA  LYS   100      43.981  31.399  35.370  1.00  0.00              
ATOM    101  CA  ALA   101      46.771  29.320  36.794  1.00  0.00              
ATOM    102  CA  ASP   102      49.486  31.814  35.772  1.00  0.00              
ATOM    103  CA  THR   103      47.950  35.174  36.775  1.00  0.00              
ATOM    104  CA  LEU   104      46.420  34.007  40.078  1.00  0.00              
ATOM    105  CA  SER   105      49.573  32.132  40.959  1.00  0.00              
ATOM    106  CA  SER   106      51.915  35.116  40.372  1.00  0.00              
ATOM    107  CA  CYS   107      49.909  37.506  42.572  1.00  0.00              
ATOM    108  CA  ASP   108      48.548  35.065  45.160  1.00  0.00              
ATOM    109  CA  TYR   109      44.829  35.182  44.305  1.00  0.00              
ATOM    110  CA  VAL   110      42.700  32.393  42.990  1.00  0.00              
ATOM    111  CA  TYR   111      39.419  33.291  41.419  1.00  0.00              
ATOM    112  CA  LEU   112      36.816  30.687  40.971  1.00  0.00              
ATOM    113  CA  ALA   113      33.765  31.352  38.897  1.00  0.00              
ATOM    114  CA  VAL   114      30.545  29.493  39.511  1.00  0.00              
ATOM    115  CA  TYR   115      27.961  29.226  36.695  1.00  0.00              
ATOM    116  CA  PRO   116      24.445  27.907  37.096  1.00  0.00              
ATOM    117  CA  THR   117      24.209  24.578  35.191  1.00  0.00              
ATOM    118  CA  PRO   118      21.136  25.161  33.147  1.00  0.00              
ATOM    119  CA  GLU   119      19.135  22.033  34.168  1.00  0.00              
ATOM    120  CA  MET   120      22.475  19.576  33.641  1.00  0.00              
ATOM    121  CA  LYS   121      26.004  17.833  35.090  1.00  0.00              
ATOM    122  CA  ASN   122      23.026  16.819  36.837  1.00  0.00              
TER                                                                             
END
