
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  122 (  122),  selected  107 , name T0304TS168_4
# Molecule2: number of CA atoms  107 (  848),  selected  107 , name T0304.pdb
# PARAMETERS: T0304TS168_4.T0304.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    45        43 - 87          4.93    18.69
  LONGEST_CONTINUOUS_SEGMENT:    45        44 - 88          4.95    18.39
  LCS_AVERAGE:     28.81

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    23        54 - 76          1.96    15.96
  LONGEST_CONTINUOUS_SEGMENT:    23        56 - 78          1.99    15.66
  LONGEST_CONTINUOUS_SEGMENT:    23        57 - 79          1.91    15.63
  LCS_AVERAGE:     10.33

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    17        63 - 79          0.87    14.62
  LCS_AVERAGE:      6.52

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  107
LCS_GDT     D      16     D      16      4    7   12     3    4    5    6    9   12   14   17   20   22   23   25   27   28   31   32   32   32   33   35 
LCS_GDT     R      17     R      17      4    8   12     3    3    6    6    9   12   14   17   20   22   23   25   27   28   31   32   32   32   33   35 
LCS_GDT     P      18     P      18      4    8   12     3    4    6    6    9   12   14   17   20   22   23   25   27   28   31   32   32   32   34   36 
LCS_GDT     W      19     W      19      4    8   12     3    4    6    7    9   12   14   17   20   22   23   25   27   28   31   32   33   33   38   39 
LCS_GDT     W      20     W      20      4    8   12     3    4    4    4    6   11   12   17   20   22   23   25   27   28   31   32   33   33   38   39 
LCS_GDT     G      21     G      21      4    8   12     3    4    6    6    7    8   10   11   17   21   22   24   27   28   30   32   33   33   38   39 
LCS_GDT     L      22     L      22      3    8   12     3    4    6    6    7    8    8    9   10   10   15   23   24   27   29   32   33   35   38   40 
LCS_GDT     P      23     P      23      4    8   12     3    4    6    6   10   10   14   14   14   17   20   23   29   33   33   36   39   43   44   46 
LCS_GDT     C      24     C      24      4    8   12     3    3    4    5    7    9   11   12   14   16   20   23   27   33   33   36   39   43   44   46 
LCS_GDT     T      25     T      25      4    6   12     3    3    4    6    7    8    9   10   13   14   17   19   24   25   29   31   35   39   44   44 
LCS_GDT     V      26     V      26      4    6   12     3    3    4    6    7    8    9   10   13   14   16   19   24   25   29   31   35   39   44   44 
LCS_GDT     T      27     T      27      4    6   12     3    4    4    6    7    8    9   10   13   14   15   19   22   23   26   28   33   37   40   42 
LCS_GDT     P      28     P      28      4    6   12     3    4    4    6    7    8    9   10   13   14   15   19   22   24   29   31   33   37   40   42 
LCS_GDT     C      29     C      29      4    6   12     3    4    4    5    7    8    9   10   13   14   15   19   22   24   29   31   33   37   40   42 
LCS_GDT     F      30     F      30      4    6   12     3    4    4    5    6    8    9   10   13   14   15   19   22   24   29   31   33   37   40   43 
LCS_GDT     G      31     G      31      4    5   12     3    3    4    4    5    8    9   10   11   12   14   17   22   31   34   35   38   39   44   45 
LCS_GDT     A      32     A      32      3    3   12     3    4    4    5    6   11   16   20   22   25   28   31   34   38   41   41   41   43   44   47 
LCS_GDT     R      33     R      33      3    3   12     3    3    3    4   11   15   22   25   27   29   33   36   38   39   41   44   47   49   52   55 
LCS_GDT     L      34     L      34      3    3   12     3    3    5    9   12   20   23   29   32   32   33   36   39   41   45   47   49   52   54   56 
LCS_GDT     V      35     V      35      3    3   12     3    6    8   10   14   19   21   24   27   31   33   36   39   42   45   47   49   52   54   56 
LCS_GDT     Q      36     Q      36      3    4   15     3    4    4    5    5   10   15   19   25   29   32   36   39   42   45   47   49   52   54   56 
LCS_GDT     E      37     E      37      3    5   15     3    4    4    5    5    6    7    7   11   17   20   24   29   32   37   45   49   52   54   55 
LCS_GDT     G      38     G      38      3    5   15     3    3    4    5    5    6    7   10   12   12   14   21   22   30   37   39   46   47   53   55 
LCS_GDT     N      39     N      39      3    5   15     3    4    4    4    5    5    5    6   12   12   14   18   22   30   33   36   41   49   52   53 
LCS_GDT     R      40     R      40      3    5   15     3    4    4    4    5    5    7   10   12   13   19   21   23   30   35   37   40   50   52   55 
LCS_GDT     L      41     L      41      3    5   42     0    4    4    4    6    8    9   12   16   19   23   29   32   39   42   47   49   52   54   56 
LCS_GDT     H      42     H      42      3    3   42     0    3    3    5    6    8   15   21   22   25   32   34   38   41   45   47   49   52   54   56 
LCS_GDT     Y      43     Y      43      3    3   45     1    3    4    5    6    9   12   16   22   29   30   34   38   42   45   47   49   52   54   56 
LCS_GDT     L      44     L      44      4    6   45     4    4    4    5    5    7   11   16   22   25   32   34   38   41   45   47   49   52   54   56 
LCS_GDT     A      45     A      45      4    6   45     4    4    5    7   12   15   18   21   23   27   32   34   38   42   45   47   49   52   54   56 
LCS_GDT     D      46     D      46      4    6   45     4    4    5    7   12   15   18   21   23   27   32   34   38   42   45   47   49   52   54   56 
LCS_GDT     R      47     R      47      4    6   45     4    4    4    6    6   11   18   21   22   27   32   34   38   41   45   47   49   52   54   56 
LCS_GDT     A      48     A      48      4    6   45     3    4    5    7   12   17   24   26   29   32   35   36   39   42   45   47   49   52   54   56 
LCS_GDT     G      49     G      49      4    7   45     3    4    5   11   16   22   26   28   30   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     I      50     I      50      6    7   45     3    4    7   11   18   22   26   28   31   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     R      51     R      51      6    7   45     3    5    6    7    8   10   12   19   22   25   36   37   39   42   45   47   49   52   54   55 
LCS_GDT     G      52     G      52      6    7   45     3    5    6    7    8   10   15   28   30   34   36   37   39   42   45   47   49   52   54   55 
LCS_GDT     L      53     L      53      6   18   45     3    5    6    7   18   22   26   28   31   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     F      54     F      54     13   23   45     3   10   13   16   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     S      55     S      55     13   23   45     3    5   12   16   19   23   28   29   32   32   34   37   39   40   44   46   49   50   54   55 
LCS_GDT     D      56     D      56     13   23   45     9   11   13   16   19   24   28   29   32   34   36   37   39   41   45   47   49   52   54   55 
LCS_GDT     A      57     A      57     13   23   45     9   11   13   16   19   24   28   29   32   34   36   37   39   42   45   47   49   52   54   55 
LCS_GDT     D      58     D      58     13   23   45     9   11   13   16   19   24   28   29   32   34   36   37   39   42   45   47   49   52   54   55 
LCS_GDT     A      59     A      59     13   23   45     9   11   13   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     Y      60     Y      60     13   23   45     9   11   13   16   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   55 
LCS_GDT     H      61     H      61     13   23   45     9   11   13   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     L      62     L      62     13   23   45     9   11   14   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     D      63     D      63     17   23   45     9   11   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     Q      64     Q      64     17   23   45     9   11   13   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     A      65     A      65     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     F      66     F      66     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     P      67     P      67     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     L      68     L      68     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     L      69     L      69     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     M      70     M      70     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     K      71     K      71     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     Q      72     Q      72     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     L      73     L      73     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     E      74     E      74     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     L      75     L      75     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     M      76     M      76     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     L      77     L      77     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     T      78     T      78     17   23   45    14   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     S      79     S      79     17   23   45     4   15   16   19   22   24   28   29   32   34   36   37   39   42   45   47   49   52   54   56 
LCS_GDT     G      80     G      80      3   21   45     3    3    5    7   14   21   26   28   31   34   36   37   39   41   45   47   49   52   54   55 
LCS_GDT     E      81     E      81      4   21   45     3    5    7   14   19   22   26   28   31   34   36   37   39   42   45   47   49   52   54   55 
LCS_GDT     L      82     L      82      6   19   45     3    4    7    7    8   12   18   23   27   32   36   37   39   41   44   47   49   51   54   55 
LCS_GDT     N      83     N      83      6    8   45     4    5    7    7    8   14   21   27   31   34   36   37   39   39   42   43   45   50   54   54 
LCS_GDT     P      84     P      84      6    8   45     4    5    7    7    9   11   14   21   24   26   29   34   37   39   40   41   43   45   46   49 
LCS_GDT     R      85     R      85      6    9   45     4    5    7    7   13   21   26   28   31   34   36   37   39   39   42   43   45   50   54   54 
LCS_GDT     H      86     H      86      6    9   45     4    5    7    8   10   21   26   28   31   34   36   37   39   41   44   47   49   52   54   55 
LCS_GDT     Q      87     Q      87      7    9   45     3    6    7    8   10   10   19   22   28   32   33   36   39   42   45   47   49   52   54   55 
LCS_GDT     H      88     H      88      7    9   45     3    6    8   13   21   22   25   29   32   32   33   36   39   42   45   47   49   52   54   55 
LCS_GDT     T      89     T      89      7    9   43     3    7   13   17   19   21   25   29   32   32   33   36   38   42   45   47   49   52   54   56 
LCS_GDT     V      90     V      90      7    9   43     3    5    7    8   11   20   24   26   29   31   32   34   38   41   45   47   48   50   53   56 
LCS_GDT     T      91     T      91      7    9   24     3    6    7    8   10   12   14   17   23   24   28   30   38   40   45   47   48   50   53   56 
LCS_GDT     L      92     L      92      7    9   24     3    6    7    8   10   12   14   17   20   22   26   28   33   38   39   42   47   50   52   56 
LCS_GDT     Y      93     Y      93      7    9   24     3    6    7    8   10   12   14   17   20   22   23   25   27   28   31   32   33   44   45   46 
LCS_GDT     A      94     A      94      3    6   24     3    3    3    4    5    8   10   16   20   22   23   25   27   28   31   32   33   35   39   44 
LCS_GDT     K      95     K      95      4    6   24     3    3    4    4    5    7    9    9   11   12   17   25   27   28   31   32   33   33   39   39 
LCS_GDT     G      96     G      96      4    6   24     3    3    4    4    5    7    9   10   10   18   23   25   27   28   31   32   35   37   44   44 
LCS_GDT     L      97     L      97      4    6   24     3    3    4    4    5    7    9   10   14   18   22   24   28   33   37   42   44   49   52   56 
LCS_GDT     T      98     T      98      4    6   24     3    3    4    7   10   15   18   21   26   27   30   33   35   38   41   42   47   50   52   56 
LCS_GDT     C      99     C      99      3    6   23     3    3    4    4    5    6    7    7   15   16   21   25   30   32   37   42   45   50   52   56 
LCS_GDT     K     100     K     100      3    5   23     0    3    4    4    5    9   13   14   15   16   17   17   21   24   29   35   39   47   50   55 
LCS_GDT     A     101     A     101      3    5   23     0    3    4    4    5    9   13   14   15   17   26   28   33   38   39   42   47   50   52   56 
LCS_GDT     D     102     D     102      4    5   23     0    3    4    6    8   12   14   15   18   21   26   28   33   38   39   42   47   50   53   56 
LCS_GDT     T     103     T     103      4    5   23     3    3    4    5    5    9   13   14   18   20   28   29   33   38   39   42   47   50   53   56 
LCS_GDT     L     104     L     104      4    6   23     3    4    4    5    9   12   18   21   23   27   32   34   38   41   45   47   48   50   53   56 
LCS_GDT     S     105     S     105      4    6   23     3    4    5    8   10   12   15   17   22   24   28   30   35   38   39   42   47   50   53   56 
LCS_GDT     S     106     S     106      4    6   23     3    4    5    8   10   12   18   21   23   24   32   34   38   40   42   46   48   50   53   56 
LCS_GDT     C     107     C     107      4    7   23     3    3    4    5    7    9   10   14   16   20   28   29   32   37   39   40   45   49   52   55 
LCS_GDT     D     108     D     108      4    7   23     3    3    4    5    7   10   18   21   22   27   32   34   38   41   44   47   48   50   53   56 
LCS_GDT     Y     109     Y     109      4    7   23     1    3    5    8   11   12   18   21   25   29   32   34   38   41   45   47   48   51   54   56 
LCS_GDT     V     110     V     110      3    7   23     3    4    5    8   11   12   18   21   25   29   32   34   38   41   45   47   49   52   54   56 
LCS_GDT     Y     111     Y     111      3    7   23     3    3    6   14   21   24   28   29   32   32   33   36   39   42   45   47   49   52   54   56 
LCS_GDT     L     112     L     112      3    7   23     3   13   16   19   21   24   28   29   32   32   33   36   39   42   45   47   49   52   54   56 
LCS_GDT     A     113     A     113      3    7   23     2    3    4    6    8   18   23   29   32   32   33   36   39   42   45   47   49   52   54   56 
LCS_GDT     V     114     V     114      4    8   23     3    4    5    8   10   12   20   23   27   29   32   36   38   41   45   47   48   50   53   56 
LCS_GDT     Y     115     Y     115      4    8   23     3    4    5    8   10   12   18   21   22   24   28   34   38   41   45   47   48   50   53   56 
LCS_GDT     P     116     P     116      4    8   23     3    4    5    6    7    9   12   14   22   24   26   30   33   38   45   47   48   50   53   55 
LCS_GDT     T     117     T     117      4    8   23     3    4    5    6   14   16   20   23   24   27   32   34   38   41   45   47   48   50   53   56 
LCS_GDT     P     118     P     118      4    8   23     3    6    8   10   14   16   20   23   24   27   32   34   38   41   45   47   48   50   53   56 
LCS_GDT     E     119     E     119      4    8   23     3    6    8   10   14   16   20   23   24   27   32   34   38   41   45   47   48   50   53   56 
LCS_GDT     M     120     M     120      4    8   23     3    4    8   10   14   16   20   23   24   27   32   34   38   41   45   47   48   50   53   56 
LCS_GDT     K     121     K     121      4    8   23     3    4    5    7   10   12   16   20   23   27   32   34   38   41   45   47   48   50   53   56 
LCS_GDT     N     122     N     122      4    5   23     3    4    4    4    5    8   13   16   22   24   28   34   38   41   45   47   48   50   53   55 
LCS_AVERAGE  LCS_A:  15.22  (   6.52   10.33   28.81 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     14     15     16     19     22     24     28     29     32     34     36     37     39     42     45     47     49     52     54     56 
GDT PERCENT_CA  13.08  14.02  14.95  17.76  20.56  22.43  26.17  27.10  29.91  31.78  33.64  34.58  36.45  39.25  42.06  43.93  45.79  48.60  50.47  52.34
GDT RMS_LOCAL    0.17   0.32   0.65   1.10   1.64   1.76   2.16   2.26   2.60   3.09   3.27   3.38   3.66   4.70   4.87   5.14   5.24   5.71   5.85   6.81
GDT RMS_ALL_CA  14.55  14.54  14.30  14.55  15.19  15.12  15.52  15.48  15.31  18.81  18.85  18.82  18.46  16.30  16.29  15.17  16.63  16.79  16.80  15.67

#      Molecule1      Molecule2       DISTANCE
LGA    D      16      D      16         41.327
LGA    R      17      R      17         38.115
LGA    P      18      P      18         32.266
LGA    W      19      W      19         28.813
LGA    W      20      W      20         25.160
LGA    G      21      G      21         25.572
LGA    L      22      L      22         21.864
LGA    P      23      P      23         19.498
LGA    C      24      C      24         19.987
LGA    T      25      T      25         25.502
LGA    V      26      V      26         24.178
LGA    T      27      T      27         28.211
LGA    P      28      P      28         26.120
LGA    C      29      C      29         22.864
LGA    F      30      F      30         19.585
LGA    G      31      G      31         16.440
LGA    A      32      A      32         10.542
LGA    R      33      R      33          6.521
LGA    L      34      L      34          4.689
LGA    V      35      V      35          6.108
LGA    Q      36      Q      36          8.370
LGA    E      37      E      37         13.060
LGA    G      38      G      38         17.337
LGA    N      39      N      39         18.124
LGA    R      40      R      40         16.531
LGA    L      41      L      41         13.748
LGA    H      42      H      42         14.008
LGA    Y      43      Y      43         12.364
LGA    L      44      L      44         14.514
LGA    A      45      A      45         12.974
LGA    D      46      D      46         13.856
LGA    R      47      R      47         15.120
LGA    A      48      A      48         11.884
LGA    G      49      G      49         12.157
LGA    I      50      I      50         10.088
LGA    R      51      R      51         13.274
LGA    G      52      G      52         12.567
LGA    L      53      L      53          7.658
LGA    F      54      F      54          1.699
LGA    S      55      S      55          2.985
LGA    D      56      D      56          2.445
LGA    A      57      A      57          3.115
LGA    D      58      D      58          2.379
LGA    A      59      A      59          0.719
LGA    Y      60      Y      60          1.008
LGA    H      61      H      61          0.476
LGA    L      62      L      62          2.112
LGA    D      63      D      63          2.567
LGA    Q      64      Q      64          2.858
LGA    A      65      A      65          3.528
LGA    F      66      F      66          3.930
LGA    P      67      P      67          3.555
LGA    L      68      L      68          2.684
LGA    L      69      L      69          2.545
LGA    M      70      M      70          2.342
LGA    K      71      K      71          1.718
LGA    Q      72      Q      72          0.978
LGA    L      73      L      73          0.948
LGA    E      74      E      74          0.721
LGA    L      75      L      75          0.773
LGA    M      76      M      76          0.867
LGA    L      77      L      77          0.722
LGA    T      78      T      78          1.622
LGA    S      79      S      79          2.203
LGA    G      80      G      80          7.203
LGA    E      81      E      81          7.195
LGA    L      82      L      82          8.630
LGA    N      83      N      83         12.686
LGA    P      84      P      84         15.731
LGA    R      85      R      85         16.001
LGA    H      86      H      86         12.700
LGA    Q      87      Q      87          9.747
LGA    H      88      H      88          3.579
LGA    T      89      T      89          4.726
LGA    V      90      V      90          7.815
LGA    T      91      T      91         13.614
LGA    L      92      L      92         16.850
LGA    Y      93      Y      93         23.056
LGA    A      94      A      94         23.213
LGA    K      95      K      95         26.160
LGA    G      96      G      96         22.396
LGA    L      97      L      97         15.125
LGA    T      98      T      98         10.749
LGA    C      99      C      99         12.157
LGA    K     100      K     100         15.141
LGA    A     101      A     101         14.665
LGA    D     102      D     102         14.073
LGA    T     103      T     103         14.297
LGA    L     104      L     104         14.137
LGA    S     105      S     105         19.706
LGA    S     106      S     106         17.708
LGA    C     107      C     107         21.485
LGA    D     108      D     108         15.557
LGA    Y     109      Y     109          9.656
LGA    V     110      V     110          8.556
LGA    Y     111      Y     111          3.211
LGA    L     112      L     112          2.391
LGA    A     113      A     113          4.463
LGA    V     114      V     114          8.033
LGA    Y     115      Y     115         12.649
LGA    P     116      P     116         17.054
LGA    T     117      T     117         15.939
LGA    P     118      P     118         17.238
LGA    E     119      E     119         19.325
LGA    M     120      M     120         21.696
LGA    K     121      K     121         25.761
LGA    N     122      N     122         28.417

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  122  107    4.0     29    2.26    25.701    22.172     1.226

LGA_LOCAL      RMSD =  2.265  Number of atoms =   29  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 15.444  Number of atoms =  107 
Std_ALL_ATOMS  RMSD = 13.795  (standard rmsd on all 107 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.333452 * X  +  -0.522631 * Y  +   0.784644 * Z  +  43.576408
  Y_new =  -0.185759 * X  +   0.852385 * Y  +   0.488809 * Z  +  29.418898
  Z_new =  -0.924285 * X  +   0.017239 * Y  +  -0.381313 * Z  +  45.843063 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =   3.096413   -0.045179  [ DEG:   177.4114     -2.5886 ]
  Theta =   1.179159    1.962434  [ DEG:    67.5608    112.4392 ]
  Phi   =  -2.633330    0.508263  [ DEG:  -150.8787     29.1213 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0304TS168_4                                  
REMARK     2: T0304.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0304TS168_4.T0304.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  122  107   4.0   29   2.26  22.172    13.80
REMARK  ---------------------------------------------------------- 
MOLECULE T0304TS168_4
PFRMAT TS
TARGET T0304
MODEL 4
PARENT N/A
ATOM      1  CA  MET     1      36.337  24.057  69.781  1.00 25.00           C
ATOM      2  CA  SER     2      35.496  27.742  70.369  1.00 25.00           C
ATOM      3  CA  ASP     3      33.853  29.963  67.772  1.00 25.00           C
ATOM      4  CA  THR     4      30.306  28.952  68.658  1.00 25.00           C
ATOM      5  CA  LEU     5      29.178  30.894  65.631  1.00 25.00           C
ATOM      6  CA  PRO     6      26.888  30.062  62.726  1.00 25.00           C
ATOM      7  CA  GLY     7      24.190  32.710  63.488  1.00 25.00           C
ATOM      8  CA  THR     8      25.623  34.445  60.386  1.00 25.00           C
ATOM      9  CA  THR     9      27.176  35.982  57.315  1.00 25.00           C
ATOM     10  CA  LEU    10      30.068  38.258  56.315  1.00 25.00           C
ATOM     11  CA  PRO    11      29.007  41.892  56.025  1.00 25.00           C
ATOM     12  CA  ASP    12      25.786  43.825  55.301  1.00 25.00           C
ATOM     13  CA  ASP    13      24.268  47.244  55.341  1.00 25.00           C
ATOM     14  CA  ASN    14      27.421  48.808  56.644  1.00 25.00           C
ATOM     15  CA  HIS    15      26.715  49.104  60.354  1.00 25.00           C
ATOM     16  CA  ASP    16      29.687  51.192  61.477  1.00 25.00           C
ATOM     17  CA  ARG    17      32.096  51.051  58.523  1.00 25.00           C
ATOM     18  CA  PRO    18      35.210  49.342  57.212  1.00 25.00           C
ATOM     19  CA  TRP    19      38.560  47.541  57.233  1.00 25.00           C
ATOM     20  CA  TRP    20      39.675  44.420  59.028  1.00 25.00           C
ATOM     21  CA  GLY    21      43.130  44.328  60.573  1.00 25.00           C
ATOM     22  CA  LEU    22      44.954  41.039  60.917  1.00 25.00           C
ATOM     23  CA  PRO    23      43.854  40.443  57.288  1.00 25.00           C
ATOM     24  CA  CYS    24      44.938  37.666  54.837  1.00 25.00           C
ATOM     25  CA  THR    25      45.684  35.235  57.719  1.00 25.00           C
ATOM     26  CA  VAL    26      45.350  32.531  55.023  1.00 25.00           C
ATOM     27  CA  THR    27      46.875  29.835  57.194  1.00 25.00           C
ATOM     28  CA  PRO    28      47.708  26.462  55.633  1.00 25.00           C
ATOM     29  CA  CYS    29      51.317  26.175  54.390  1.00 25.00           C
ATOM     30  CA  PHE    30      54.255  24.928  52.329  1.00 25.00           C
ATOM     31  CA  GLY    31      53.939  21.198  51.523  1.00 25.00           C
ATOM     32  CA  ALA    32      50.176  21.342  52.220  1.00 25.00           C
ATOM     33  CA  ARG    33      49.843  24.390  49.926  1.00 25.00           C
ATOM     34  CA  LEU    34      51.766  22.556  47.167  1.00 25.00           C
ATOM     35  CA  VAL    35      49.475  19.513  47.560  1.00 25.00           C
ATOM     36  CA  GLN    36      46.391  21.772  47.324  1.00 25.00           C
ATOM     37  CA  GLU    37      47.796  23.399  44.155  1.00 25.00           C
ATOM     38  CA  GLY    38      48.435  19.943  42.634  1.00 25.00           C
ATOM     39  CA  ASN    39      44.852  18.884  43.472  1.00 25.00           C
ATOM     40  CA  ARG    40      43.501  22.076  41.843  1.00 25.00           C
ATOM     41  CA  LEU    41      45.597  21.393  38.712  1.00 25.00           C
ATOM     42  CA  HIS    42      44.264  17.806  38.570  1.00 25.00           C
ATOM     43  CA  TYR    43      40.674  19.102  38.893  1.00 25.00           C
ATOM     44  CA  LEU    44      41.298  21.608  36.064  1.00 25.00           C
ATOM     45  CA  ALA    45      42.714  18.810  33.865  1.00 25.00           C
ATOM     46  CA  ASP    46      39.642  16.644  34.600  1.00 25.00           C
ATOM     47  CA  ARG    47      37.337  19.562  33.685  1.00 25.00           C
ATOM     48  CA  ALA    48      36.683  23.197  34.741  1.00 25.00           C
ATOM     49  CA  GLY    49      38.055  24.181  31.317  1.00 25.00           C
ATOM     50  CA  ILE    50      41.750  24.704  30.593  1.00 25.00           C
ATOM     51  CA  ARG    51      44.651  26.207  28.738  1.00 25.00           C
ATOM     52  CA  GLY    52      43.662  24.351  25.613  1.00 25.00           C
ATOM     53  CA  LEU    53      41.893  21.002  25.982  1.00 25.00           C
ATOM     54  CA  PHE    54      41.417  17.790  27.967  1.00 25.00           C
ATOM     55  CA  SER    55      42.393  14.288  27.021  1.00 25.00           C
ATOM     56  CA  ASP    56      45.755  12.422  27.039  1.00 25.00           C
ATOM     57  CA  ALA    57      48.781  14.467  25.888  1.00 25.00           C
ATOM     58  CA  ASP    58      46.827  17.715  26.441  1.00 25.00           C
ATOM     59  CA  ALA    59      45.838  16.549  29.953  1.00 25.00           C
ATOM     60  CA  TYR    60      49.495  15.716  30.733  1.00 25.00           C
ATOM     61  CA  HIS    61      50.572  19.179  29.503  1.00 25.00           C
ATOM     62  CA  LEU    62      47.901  20.818  31.704  1.00 25.00           C
ATOM     63  CA  ASP    63      49.109  18.795  34.722  1.00 25.00           C
ATOM     64  CA  GLN    64      52.720  19.866  34.026  1.00 25.00           C
ATOM     65  CA  ALA    65      51.616  23.526  33.802  1.00 25.00           C
ATOM     66  CA  PHE    66      49.748  23.192  37.128  1.00 25.00           C
ATOM     67  CA  PRO    67      52.859  21.657  38.750  1.00 25.00           C
ATOM     68  CA  LEU    68      55.006  24.533  37.413  1.00 25.00           C
ATOM     69  CA  LEU    69      52.508  27.078  38.809  1.00 25.00           C
ATOM     70  CA  MET    70      52.587  25.327  42.214  1.00 25.00           C
ATOM     71  CA  LYS    71      56.416  25.398  42.188  1.00 25.00           C
ATOM     72  CA  GLN    72      56.365  29.133  41.345  1.00 25.00           C
ATOM     73  CA  LEU    73      53.913  29.773  44.216  1.00 25.00           C
ATOM     74  CA  GLU    74      56.174  27.824  46.615  1.00 25.00           C
ATOM     75  CA  LEU    75      59.200  29.869  45.464  1.00 25.00           C
ATOM     76  CA  MET    76      57.246  33.117  46.017  1.00 25.00           C
ATOM     77  CA  LEU    77      56.258  31.952  49.529  1.00 25.00           C
ATOM     78  CA  THR    78      59.914  31.118  50.309  1.00 25.00           C
ATOM     79  CA  SER    79      60.567  34.848  49.733  1.00 25.00           C
ATOM     80  CA  GLY    80      63.180  35.160  46.927  1.00 25.00           C
ATOM     81  CA  GLU    81      61.800  38.249  45.249  1.00 25.00           C
ATOM     82  CA  LEU    82      59.322  39.963  47.660  1.00 25.00           C
ATOM     83  CA  ASN    83      60.341  43.089  45.687  1.00 25.00           C
ATOM     84  CA  PRO    84      58.129  45.434  47.597  1.00 25.00           C
ATOM     85  CA  ARG    85      55.989  45.349  44.402  1.00 25.00           C
ATOM     86  CA  HIS    86      55.384  41.779  43.238  1.00 25.00           C
ATOM     87  CA  GLN    87      52.987  40.024  45.614  1.00 25.00           C
ATOM     88  CA  HIS    88      49.546  38.637  45.090  1.00 25.00           C
ATOM     89  CA  THR    89      47.600  36.011  47.000  1.00 25.00           C
ATOM     90  CA  VAL    90      44.813  33.385  47.100  1.00 25.00           C
ATOM     91  CA  THR    91      43.417  30.441  49.099  1.00 25.00           C
ATOM     92  CA  LEU    92      44.121  26.847  50.320  1.00 25.00           C
ATOM     93  CA  TYR    93      41.474  25.621  52.773  1.00 25.00           C
ATOM     94  CA  ALA    94      39.049  26.663  50.031  1.00 25.00           C
ATOM     95  CA  LYS    95      37.367  29.748  48.632  1.00 25.00           C
ATOM     96  CA  GLY    96      36.297  29.369  44.986  1.00 25.00           C
ATOM     97  CA  LEU    97      39.100  28.848  42.489  1.00 25.00           C
ATOM     98  CA  THR    98      39.204  26.324  39.622  1.00 25.00           C
ATOM     99  CA  CYS    99      37.792  23.247  41.459  1.00 25.00           C
ATOM    100  CA  LYS   100      36.102  19.978  42.550  1.00 25.00           C
ATOM    101  CA  ALA   101      36.320  21.116  46.184  1.00 25.00           C
ATOM    102  CA  ASP   102      34.442  24.456  45.906  1.00 25.00           C
ATOM    103  CA  THR   103      34.181  24.339  49.698  1.00 25.00           C
ATOM    104  CA  LEU   104      36.278  21.655  51.408  1.00 25.00           C
ATOM    105  CA  SER   105      33.774  18.831  51.366  1.00 25.00           C
ATOM    106  CA  SER   106      36.221  16.737  49.418  1.00 25.00           C
ATOM    107  CA  CYS   107      36.666  16.134  45.704  1.00 25.00           C
ATOM    108  CA  ASP   108      40.171  17.342  46.391  1.00 25.00           C
ATOM    109  CA  TYR   109      42.046  19.242  49.157  1.00 25.00           C
ATOM    110  CA  VAL   110      41.426  22.178  46.764  1.00 25.00           C
ATOM    111  CA  TYR   111      41.987  25.566  45.128  1.00 25.00           C
ATOM    112  CA  LEU   112      45.008  27.903  44.821  1.00 25.00           C
ATOM    113  CA  ALA   113      46.642  28.050  41.381  1.00 25.00           C
ATOM    114  CA  VAL   114      45.449  31.631  41.248  1.00 25.00           C
ATOM    115  CA  TYR   115      44.539  35.320  40.615  1.00 25.00           C
ATOM    116  CA  PRO   116      41.189  36.458  41.997  1.00 25.00           C
ATOM    117  CA  THR   117      38.929  38.504  39.716  1.00 25.00           C
ATOM    118  CA  PRO   118      37.855  42.072  38.734  1.00 25.00           C
ATOM    119  CA  GLU   119      36.418  44.180  35.903  1.00 25.00           C
ATOM    120  CA  MET   120      35.546  46.665  38.624  1.00 25.00           C
ATOM    121  CA  LYS   121      37.599  49.844  38.396  1.00 25.00           C
ATOM    122  CA  ASN   122      37.809  50.742  42.050  1.00 25.00           C
TER
END
