
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  233 (  233),  selected  233 , name T0289TS599_1-D1
# Molecule2: number of CA atoms  233 ( 1850),  selected  233 , name T0289_D1.pdb
# PARAMETERS: T0289TS599_1-D1.T0289_D1.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    45        71 - 115         4.98    23.58
  LONGEST_CONTINUOUS_SEGMENT:    45        72 - 116         4.88    23.70
  LCS_AVERAGE:     15.93

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    26       183 - 208         1.90    20.58
  LONGEST_CONTINUOUS_SEGMENT:    26       184 - 209         1.47    19.91
  LONGEST_CONTINUOUS_SEGMENT:    26       185 - 210         1.91    19.82
  LCS_AVERAGE:      6.71

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    23       186 - 208         0.92    19.95
  LCS_AVERAGE:      4.77

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  233
LCS_GDT     C       4     C       4      5    6    9     4    4    5    5    5    7    8   13   14   16   18   19   21   22   23   24   26   30   35   37 
LCS_GDT     V       5     V       5      5    6    9     4    4    5    5    6    9   10   13   14   16   18   19   21   22   23   24   26   33   35   39 
LCS_GDT     A       6     A       6      5    6   33     4    4    5    5    7    9   11   12   14   15   16   18   19   25   27   29   32   35   37   39 
LCS_GDT     E       7     E       7      5    6   33     4    4    5    5    7    8   10   11   12   15   16   20   28   31   33   34   34   35   37   39 
LCS_GDT     E       8     E       8      5    6   33     4    4    5    5    6    8   16   22   28   30   31   32   32   33   33   34   41   49   54   60 
LCS_GDT     P       9     P       9      4   24   33     4    4    9   11   16   23   26   29   29   30   31   32   32   33   33   34   40   48   54   58 
LCS_GDT     I      10     I      10      5   24   33     4    4   11   16   21   25   26   29   29   30   31   32   32   33   33   34   40   49   54   60 
LCS_GDT     K      11     K      11     10   24   33     5    6   10   15   19   24   26   29   29   30   31   32   32   33   33   36   41   49   54   60 
LCS_GDT     K      12     K      12     10   25   33     5    6   11   16   21   25   26   29   29   30   31   32   32   33   33   36   41   49   54   60 
LCS_GDT     I      13     I      13     10   25   33     5    6   11   16   22   25   26   29   29   30   31   32   32   33   33   35   41   49   54   60 
LCS_GDT     A      14     A      14     10   25   33     5    7   11   16   22   25   26   29   29   30   31   32   32   36   39   44   47   52   53   58 
LCS_GDT     I      15     I      15     12   25   33     5    9   15   22   22   25   26   29   29   30   31   32   32   33   38   43   46   52   53   58 
LCS_GDT     F      16     F      16     12   25   33     5    9   15   22   22   25   26   29   29   30   31   32   32   33   33   34   36   40   43   56 
LCS_GDT     G      17     G      17     12   25   33     4    7   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     G      18     G      18     12   25   33     4    7   15   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     T      19     T      19     18   25   33     6   10   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     H      20     H      20     18   25   33     6   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     G      21     G      21     18   25   33     6   13   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     N      22     N      22     18   25   33     6    9   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     E      23     E      23     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     L      24     L      24     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     T      25     T      25     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     G      26     G      26     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     V      27     V      27     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   39   39 
LCS_GDT     F      28     F      28     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   35   36   40   45 
LCS_GDT     L      29     L      29     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   36   41   49   56 
LCS_GDT     V      30     V      30     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   39   45   51   56 
LCS_GDT     T      31     T      31     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   33   34   36   43   49   56 
LCS_GDT     H      32     H      32     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   37   40   44   47   52   53   58 
LCS_GDT     W      33     W      33     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   37   40   44   47   52   54   60 
LCS_GDT     L      34     L      34     18   25   33    13   14   19   22   22   24   26   29   29   30   31   32   32   33   33   43   47   52   54   60 
LCS_GDT     K      35     K      35     18   25   33    13   14   19   22   22   25   26   29   29   30   31   32   32   33   34   44   47   52   54   60 
LCS_GDT     N      36     N      36     18   25   33     5   14   19   22   22   25   26   29   29   30   31   32   32   37   40   44   47   52   54   60 
LCS_GDT     G      37     G      37     15   24   33     3    4    9   18   21   22   23   25   27   29   31   32   32   36   40   44   47   52   54   60 
LCS_GDT     A      38     A      38      4    5   33     4    4    4    5    9   12   18   22   25   26   27   28   31   36   40   44   47   52   54   60 
LCS_GDT     E      39     E      39      4    5   33     4    4    4    4    5    7   11   14   18   23   27   28   32   37   40   44   47   52   54   60 
LCS_GDT     V      40     V      40      4    5   31     4    4    4    4    5    8   12   15   18   23   25   25   28   37   40   44   47   52   54   60 
LCS_GDT     H      41     H      41      4    6   31     4    4    4    7   11   13   16   20   25   26   27   28   32   37   40   44   47   52   54   60 
LCS_GDT     R      42     R      42      4   13   31     3    4    5   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   54   60 
LCS_GDT     A      43     A      43      4   13   31     3    4    6   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     G      44     G      44     10   13   31     4    8   10   12   14   18   20   20   23   24   27   28   32   37   40   43   47   52   53   58 
LCS_GDT     L      45     L      45     10   13   31     4    8   10   11   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   60 
LCS_GDT     E      46     E      46     10   13   31     5    8   10   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   54   60 
LCS_GDT     V      47     V      47     10   14   31     5    8   10   12   14   18   20   20   23   24   29   32   32   37   40   44   47   52   54   60 
LCS_GDT     K      48     K      48     10   14   31     5    8   10   12   14   18   26   29   29   30   31   32   32   37   40   44   47   52   53   60 
LCS_GDT     P      49     P      49     10   14   31     5    8   10   12   14   18   20   20   27   30   31   31   32   37   40   44   47   52   53   58 
LCS_GDT     F      50     F      50     11   14   31     5   10   11   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     I      51     I      51     11   14   31     4    8   11   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     T      52     T      52     11   14   31     4   10   11   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     N      53     N      53     11   14   31     8   10   11   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     P      54     P      54     11   14   31     8   10   11   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     R      55     R      55     11   14   31     8   10   11   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     A      56     A      56     11   14   31     8   10   11   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     V      57     V      57     11   14   31     8   10   11   12   14   18   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     E      58     E      58     11   14   31     8   10   11   12   14   16   20   20   23   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     K      59     K      59     11   14   31     8   10   11   12   14   16   20   20   23   24   27   28   32   37   40   43   47   52   53   58 
LCS_GDT     C      60     C      60     11   14   31     8   10   11   12   14   18   20   20   23   24   27   28   32   35   39   43   47   50   52   58 
LCS_GDT     T      61     T      61      3   13   31     3    3    4    4    8   13   14   17   21   24   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     R      62     R      62      3    4   31     3    3    4    6    8   11   15   17   20   23   27   28   32   37   40   44   47   52   53   58 
LCS_GDT     Y      63     Y      63      3    4   30     3    3    4    4    6   10   15   17   20   23   27   28   31   37   40   44   47   52   53   58 
LCS_GDT     I      64     I      64      4    5   30     3    4    4    6    8   11   15   17   20   23   27   28   30   32   37   39   43   50   52   57 
LCS_GDT     D      65     D      65      4    5   30     3    4    5    6    6    8   12   15   17   20   24   28   30   32   33   35   41   55   56   59 
LCS_GDT     C      66     C      66      4    5   30     3    4    5    6    8   11   15   33   34   38   38   39   43   45   48   53   54   56   60   68 
LCS_GDT     D      67     D      67      6    9   30     5    6    6    8   23   27   29   33   34   38   38   43   44   46   52   54   60   62   68   73 
LCS_GDT     L      68     L      68      6    9   30     5    6    6    8    9   11   29   33   34   38   38   40   43   46   48   55   60   62   67   73 
LCS_GDT     N      69     N      69      6    9   30     5    6    6    8    9   11   15   17   20   23   35   40   44   48   52   55   60   64   68   80 
LCS_GDT     R      70     R      70      6    9   32     5    6    6   18   24   27   30   35   38   41   42   46   50   57   64   68   73   78   85   91 
LCS_GDT     V      71     V      71      6    9   45     5    6   10   17   20   24   29   34   38   41   42   45   49   56   63   68   73   78   82   90 
LCS_GDT     F      72     F      72      6    9   45     3    6   12   19   24   27   30   35   38   41   42   46   50   59   64   68   73   81   85   91 
LCS_GDT     D      73     D      73      5   11   45     3    4    5    8   19   21   22   26   32   44   48   54   62   67   69   72   77   83   90   94 
LCS_GDT     L      74     L      74      9   11   45     3    5    8   10   11   16   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     E      75     E      75      9   11   45     3    7    8   10   16   25   29   35   43   48   52   57   62   67   69   72   76   83   90   94 
LCS_GDT     N      76     N      76      9   11   45     3    5    8   10   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     L      77     L      77      9   11   45     4    7    8   10   16   24   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     S      78     S      78      9   11   45     4    7    8   10   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     K      79     K      79      9   11   45     4    7    8   10   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     E      80     E      80      9   11   45     4    7    8   10   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     M      81     M      81      9   11   45     3    7    8   10   14   20   24   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     S      82     S      82      9   11   45     4    7    8   10   15   20   24   34   42   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     E      83     E      83      8   11   45     3    6    8   10   12   17   20   25   33   42   49   55   62   67   69   72   77   83   90   94 
LCS_GDT     D      84     D      84      8   17   45     3    6    8   10   13   19   23   26   34   42   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     L      85     L      85     13   17   45     5    5    9   10   16   16   23   25   32   41   48   53   58   62   66   70   76   81   90   94 
LCS_GDT     P      86     P      86     15   17   45     5   11   14   15   16   20   24   29   34   45   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     Y      87     Y      87     15   17   45     8   13   14   15   16   20   24   29   42   45   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     E      88     E      88     15   17   45     5   13   14   15   16   20   25   34   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     V      89     V      89     15   17   45     9   13   14   15   16   20   24   34   42   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     R      90     R      90     15   17   45     9   13   14   15   16   20   24   34   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     R      91     R      91     15   17   45     9   13   14   15   16   20   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     A      92     A      92     15   17   45     9   13   14   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     Q      93     Q      93     15   17   45     9   13   14   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     E      94     E      94     15   17   45     9   13   14   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     I      95     I      95     15   17   45     9   13   14   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     N      96     N      96     15   17   45     9   13   14   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     H      97     H      97     15   17   45     9   13   14   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     L      98     L      98     15   17   45     9   13   14   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     F      99     F      99     15   17   45     9   13   14   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     G     100     G     100     15   17   45     4    8   13   15   16   25   29   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     P     101     P     101      4   17   45     3    4    5    8   14   18   24   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     K     102     K     102      4    5   45     3    4    4    6    8    9   11   16   20   29   37   47   51   57   66   72   76   83   90   94 
LCS_GDT     N     103     N     103      4    5   45     3    4    4    5    7   10   20   23   32   38   44   47   54   57   69   72   76   83   90   94 
LCS_GDT     S     104     S     104      4    5   45     3    5    5   10   14   20   24   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     D     105     D     105      4    6   45     3    4    5   10   14   18   29   35   43   48   52   57   61   67   69   72   77   83   90   94 
LCS_GDT     D     106     D     106      4   10   45     3    4    4    6    9   17   24   27   32   40   48   57   62   67   69   72   77   83   90   94 
LCS_GDT     A     107     A     107      9   10   45     4    7    9    9    9   14   15   31   35   41   42   55   62   63   67   72   77   82   90   94 
LCS_GDT     Y     108     Y     108      9   10   45     4    7    9    9   10   17   29   35   38   42   49   55   62   67   69   72   77   83   90   94 
LCS_GDT     D     109     D     109      9   10   45     4    7    9   15   20   27   30   35   38   42   51   57   62   67   69   72   77   83   90   94 
LCS_GDT     V     110     V     110      9   10   45     4    7    9    9   10   27   30   35   38   41   49   57   62   67   69   72   77   83   90   94 
LCS_GDT     V     111     V     111      9   10   45     4    7   19   22   25   27   30   35   38   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     F     112     F     112      9   10   45     4    7   19   22   25   27   30   35   38   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     D     113     D     113      9   10   45     4    7   13   22   24   26   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     L     114     L     114      9   10   45     3    7    9   22   24   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     H     115     H     115      9   10   45     3    6    9    9   14   18   22   28   33   38   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     N     116     N     116      5   10   45     3    4    6    8    9   11   15   17   29   34   42   53   62   63   66   69   77   82   90   94 
LCS_GDT     T     117     T     117      5    9   44     3    4    5    8    9   10   13   14   16   18   33   38   46   54   60   65   67   73   76   82 
LCS_GDT     T     118     T     118      5    8   42     3    4    5    7    7   10   12   20   27   30   36   40   46   49   51   54   56   65   70   76 
LCS_GDT     S     119     S     119      5    8   42     4    4    5    7    9   10   11   14   16   18   21   32   40   43   46   48   52   55   58   61 
LCS_GDT     N     120     N     120      5    8   42     4    4    5    7    8   10   11   14   23   27   31   35   40   43   46   48   52   55   58   61 
LCS_GDT     M     121     M     121      5    8   42     4    4    5    6    7   10   12   14   16   19   24   30   40   43   46   48   52   55   58   61 
LCS_GDT     G     122     G     122      8   10   42     4    6    8    9   13   15   17   24   29   35   39   40   46   48   51   54   56   59   64   70 
LCS_GDT     C     123     C     123      8   10   42     3    7    8    9   13   15   17   25   29   35   39   44   47   49   51   56   57   65   68   73 
LCS_GDT     T     124     T     124      8   10   42     3    7    8    9   13   19   24   25   29   36   40   45   47   50   53   60   63   67   73   75 
LCS_GDT     L     125     L     125      8   14   42     4    7    8    9   18   22   25   29   33   37   40   45   47   53   61   65   73   81   90   94 
LCS_GDT     I     126     I     126      8   23   42     4    7   12   18   20   22   25   29   33   37   40   45   47   53   57   62   69   76   90   94 
LCS_GDT     L     127     L     127      8   23   42     4    7    8   13   20   22   25   29   33   37   40   47   50   56   62   67   76   81   90   94 
LCS_GDT     E     128     E     128      8   23   42     4    7   11   12   16   22   25   29   33   37   40   45   48   54   59   66   73   78   81   88 
LCS_GDT     D     129     D     129      8   23   42     3    7    8    9   13   16   25   29   33   37   40   47   50   56   60   66   73   78   82   88 
LCS_GDT     S     130     S     130     18   23   42     3    4   17   18   20   22   25   29   31   36   40   45   47   53   58   66   73   76   81   87 
LCS_GDT     R     131     R     131     18   23   42     3    4   12   18   20   22   25   29   31   36   40   45   48   54   59   66   73   78   81   87 
LCS_GDT     N     132     N     132     18   23   42     8   16   17   18   20   22   25   29   31   36   40   45   47   53   57   66   73   78   81   87 
LCS_GDT     D     133     D     133     18   23   42    10   16   17   18   20   22   25   29   31   38   40   45   47   53   59   66   73   78   81   87 
LCS_GDT     F     134     F     134     18   23   42    12   16   17   18   20   22   25   29   32   37   40   45   47   53   58   66   73   78   81   87 
LCS_GDT     L     135     L     135     18   23   42    12   16   17   18   20   22   25   33   35   40   43   48   56   61   66   69   76   78   90   94 
LCS_GDT     I     136     I     136     18   23   42    12   16   17   18   21   27   30   35   38   45   46   54   62   63   69   72   76   81   90   94 
LCS_GDT     Q     137     Q     137     18   23   42    12   16   17   18   20   22   25   29   33   41   49   54   62   63   69   72   76   79   87   94 
LCS_GDT     M     138     M     138     18   23   42    12   16   17   18   20   22   25   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     F     139     F     139     18   23   42    10   16   17   21   24   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     H     140     H     140     18   23   42    12   16   17   18   20   22   28   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     Y     141     Y     141     18   23   42    12   16   17   18   20   22   25   29   33   37   51   57   61   67   69   72   77   83   90   94 
LCS_GDT     I     142     I     142     18   23   42    12   16   17   18   20   22   25   29   33   38   51   57   61   67   69   72   77   83   90   94 
LCS_GDT     K     143     K     143     18   23   42    12   16   17   18   20   22   25   29   33   37   42   49   61   67   68   72   77   83   90   94 
LCS_GDT     T     144     T     144     18   23   42    12   16   17   18   20   22   25   29   33   37   40   45   47   53   58   66   73   82   87   92 
LCS_GDT     C     145     C     145     18   23   42    12   16   17   18   20   22   25   29   32   37   40   45   47   53   57   62   66   72   82   91 
LCS_GDT     M     146     M     146     18   23   42    12   16   17   18   19   22   24   29   32   36   40   45   47   53   57   62   66   81   84   91 
LCS_GDT     A     147     A     147     18   23   42     8   16   17   18   20   22   25   29   32   36   40   45   47   53   57   60   64   70   74   85 
LCS_GDT     P     148     P     148      6   23   42     3    5   10   15   20   22   25   29   33   37   40   45   47   53   57   62   66   72   76   84 
LCS_GDT     L     149     L     149      6   21   42     3    6   11   14   19   22   25   29   33   37   40   45   47   53   57   62   66   72   76   84 
LCS_GDT     P     150     P     150      8   16   42     3    8   11   13   16   20   25   29   33   37   40   45   47   53   56   60   65   72   76   85 
LCS_GDT     C     151     C     151      8   16   42     4    8   11   13   16   20   24   29   32   37   40   45   47   53   57   61   71   81   85   91 
LCS_GDT     S     152     S     152      8   16   42     4    8   11   13   16   20   23   28   33   37   40   45   47   51   56   60   64   72   85   91 
LCS_GDT     V     153     V     153      8   16   42     4    8   11   13   16   20   23   28   33   37   42   45   51   54   64   67   73   81   87   92 
LCS_GDT     Y     154     Y     154      8   16   42     4    8   11   13   16   20   23   28   33   37   40   45   47   53   60   66   72   81   87   91 
LCS_GDT     L     155     L     155      8   16   42     4    8   11   13   16   21   27   29   33   37   42   45   51   55   62   68   73   83   90   94 
LCS_GDT     I     156     I     156      8   16   42     4    8   11   13   19   23   27   29   33   37   40   45   47   53   57   62   66   76   85   91 
LCS_GDT     E     157     E     157      8   16   42     4    8   11   13   19   23   27   29   33   36   40   45   47   53   57   62   66   73   85   91 
LCS_GDT     H     158     H     158      8   12   42     4    5    9   15   17   19   24   29   33   37   40   45   47   53   57   62   66   70   74   81 
LCS_GDT     P     159     P     159      3   12   42     4    8   13   15   17   20   24   28   33   37   40   45   47   53   57   62   66   72   76   83 
LCS_GDT     S     160     S     160      3   11   41     4    4    6    7   10   16   20   26   33   37   40   45   47   53   57   62   66   72   76   83 
LCS_GDT     L     161     L     161      3    6   41     4    4    4    4    6   10   14   20   24   33   36   42   47   53   57   62   66   70   74   80 
LCS_GDT     K     162     K     162      3    6   41     3    4    4    4    5   10   13   16   20   23   31   34   42   44   50   62   66   70   74   80 
LCS_GDT     Y     163     Y     163      6    9   40     3    4    4    7   10   10   12   16   20   23   26   31   38   44   47   55   59   65   73   80 
LCS_GDT     A     164     A     164      6    9   30     5    5    6    8   10   10   13   16   20   23   25   26   32   39   45   49   55   59   65   74 
LCS_GDT     T     165     T     165      6    9   30     5    5    6    8   10   10   13   15   19   23   25   28   31   34   39   44   47   52   53   59 
LCS_GDT     T     166     T     166      6    9   30     5    5    6    8   10   10   13   14   19   23   25   26   28   29   39   44   47   52   53   58 
LCS_GDT     R     167     R     167      6    9   30     5    5    6    8   10   10   13   15   20   23   25   26   28   28   29   30   30   36   40   51 
LCS_GDT     S     168     S     168      6    9   30     5    5    6    8   10   10   13   16   20   23   25   26   30   46   51   55   58   59   65   68 
LCS_GDT     I     169     I     169      6    9   30     4    4    6    8   10   11   13   16   20   23   25   26   29   38   49   55   58   59   64   67 
LCS_GDT     A     170     A     170      4   12   30     4    4    4    8   10   11   14   16   20   23   25   26   28   28   31   36   41   49   54   60 
LCS_GDT     K     171     K     171     10   12   30     7    9   10   10   11   13   15   16   18   18   20   23   25   28   36   41   47   52   57   62 
LCS_GDT     Y     172     Y     172     10   12   30     7    9   10   10   11   13   15   16   18   20   24   27   33   40   43   50   60   65   70   77 
LCS_GDT     P     173     P     173     10   12   30     7    9   10   10   11   13   15   16   19   23   25   29   33   47   52   55   60   65   80   81 
LCS_GDT     V     174     V     174     10   12   30     7    9   10   10   11   13   16   19   26   27   29   35   42   47   52   59   68   78   87   92 
LCS_GDT     G     175     G     175     10   12   36     7    9   10   10   11   13   16   24   26   27   35   41   44   51   60   69   77   83   87   94 
LCS_GDT     I     176     I     176     10   12   43     7    9   10   10   11   13   15   16   18   20   24   28   32   39   51   55   59   65   80   88 
LCS_GDT     E     177     E     177     10   12   43     7    9   10   10   11   13   15   16   21   33   39   44   46   53   57   63   72   81   87   91 
LCS_GDT     V     178     V     178     10   12   43     3    9   10   10   11   13   15   16   18   26   32   42   44   47   50   59   62   68   74   81 
LCS_GDT     G     179     G     179     10   12   43     3    9   10   10   13   19   24   29   32   37   40   45   47   53   57   61   66   72   75   83 
LCS_GDT     P     180     P     180     10   12   43     2    5    9   11   15   20   23   28   32   37   40   45   47   53   57   61   65   72   76   83 
LCS_GDT     Q     181     Q     181      4   12   43     3    4    6    7   11   12   17   28   32   35   39   44   47   53   57   62   66   72   85   91 
LCS_GDT     P     182     P     182      5   17   43     3    5    6   11   16   18   24   26   33   35   37   44   46   51   57   62   66   76   86   91 
LCS_GDT     H     183     H     183      5   26   43     3    5    6    9   16   18   23   28   33   35   40   44   46   51   58   67   73   82   90   94 
LCS_GDT     G     184     G     184      5   26   43     3    5   14   21   25   27   29   32   37   41   42   47   50   57   65   69   77   83   90   94 
LCS_GDT     V     185     V     185     22   26   43     3   13   20   24   25   27   30   35   38   41   42   47   50   56   63   68   74   83   90   94 
LCS_GDT     L     186     L     186     23   26   43     3   12   22   24   25   27   30   35   38   41   42   47   50   57   65   69   77   83   90   94 
LCS_GDT     R     187     R     187     23   26   43     5   14   21   24   25   27   30   33   38   41   42   47   51   57   65   69   77   83   90   94 
LCS_GDT     A     188     A     188     23   26   43     8   16   22   24   25   27   30   35   38   41   42   47   52   57   67   70   77   83   90   94 
LCS_GDT     D     189     D     189     23   26   43     8   16   22   24   25   27   30   35   38   41   45   52   61   67   68   72   77   83   90   94 
LCS_GDT     I     190     I     190     23   26   43     8   18   22   24   25   27   30   35   38   41   48   55   61   67   69   72   77   83   90   94 
LCS_GDT     L     191     L     191     23   26   43     8   18   22   24   25   27   30   35   38   41   48   55   61   67   69   72   77   83   90   94 
LCS_GDT     D     192     D     192     23   26   43     8   18   22   24   25   27   30   35   38   44   50   55   61   67   69   72   77   83   90   94 
LCS_GDT     Q     193     Q     193     23   26   43     8   18   22   24   25   27   30   35   42   48   52   57   61   67   69   72   77   83   90   94 
LCS_GDT     M     194     M     194     23   26   43    13   18   22   24   25   27   30   35   42   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     R     195     R     195     23   26   43    13   18   22   24   25   27   30   35   42   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     R     196     R     196     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     M     197     M     197     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     L     198     L     198     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     K     199     K     199     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     H     200     H     200     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     A     201     A     201     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     L     202     L     202     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     D     203     D     203     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     F     204     F     204     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     I     205     I     205     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     Q     206     Q     206     23   26   43    13   18   22   24   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     R     207     R     207     23   26   43    10   18   22   24   25   27   30   35   43   48   52   54   62   67   69   72   77   83   90   94 
LCS_GDT     F     208     F     208     23   26   43     4   18   22   24   25   27   30   35   43   48   52   54   62   67   69   72   77   83   90   94 
LCS_GDT     N     209     N     209     22   26   43     4   12   20   23   25   27   30   35   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     E     210     E     210      7   26   43     4    5    7    9   12   17   24   34   43   48   52   57   62   67   69   72   77   83   90   94 
LCS_GDT     G     211     G     211      7   10   43     4    6    7    9   10   12   20   26   32   38   42   51   59   63   69   72   77   83   90   94 
LCS_GDT     K     212     K     212      7   10   43     4    6    7    9   10   12   16   24   32   37   42   46   55   60   66   69   77   83   90   94 
LCS_GDT     E     213     E     213      7   10   43     4    6   12   15   16   17   19   26   32   37   42   46   52   58   66   69   76   83   87   94 
LCS_GDT     F     214     F     214      7   10   43     3    6   10   10   14   18   22   26   32   37   42   46   52   60   66   69   77   83   90   94 
LCS_GDT     P     215     P     215      7   10   43     3    6    7    9   13   17   22   26   32   37   42   45   52   58   64   69   76   83   87   92 
LCS_GDT     P     216     P     216      7   10   43     3    6    7    9   10   18   22   26   32   37   42   45   51   56   64   69   73   83   87   92 
LCS_GDT     C     217     C     217      7   10   43     3    5    7    9    9   12   16   20   31   37   42   45   51   55   64   69   76   83   87   92 
LCS_GDT     A     218     A     218      6   10   43     3    5    6    7   10   20   24   29   33   37   42   46   54   60   66   69   76   83   90   94 
LCS_GDT     I     219     I     219      6    8   41     4    5    6    7    8   11   14   18   25   32   34   41   48   56   64   69   74   83   90   94 
LCS_GDT     D     220     D     220      6    8   40     4    5    6    7    8   10   15   18   24   29   32   39   48   50   56   65   70   76   85   90 
LCS_GDT     V     221     V     221      6    8   19     4    5    6    8   10   10   10   14   18   19   21   22   25   27   36   43   53   61   69   75 
LCS_GDT     Y     222     Y     222      6    8   19     4    5    6    7    8    8    9   14   18   19   21   22   25   27   30   33   35   36   41   64 
LCS_GDT     K     223     K     223      5    8   19     3    5    5    7    8    8    8    9   11   14   16   16   17   17   30   32   34   36   41   45 
LCS_GDT     T     298     T     298      8    8   17     3    6    7    8    8    8    8    8    8   11   14   22   32   37   42   43   48   51   63   68 
LCS_GDT     K     299     K     299      8    8   12     3    6    7    8    8    8    8   12   13   14   16   23   24   28   32   35   48   51   55   67 
LCS_GDT     L     300     L     300      8    8   12     3    6    7    8    8    8    8   12   15   18   24   26   32   39   43   51   57   63   71   78 
LCS_GDT     T     301     T     301      8    8   12     3    6    7    8    8    8    8   12   15   16   17   27   33   38   43   51   55   61   68   76 
LCS_GDT     L     302     L     302      8    8   12     3    6    7    8    8    8    8   12   15   16   24   26   32   39   43   50   57   61   71   78 
LCS_GDT     N     303     N     303      8    8   12     3    6    7    8    8    8   13   13   15   16   24   27   36   39   49   53   60   64   71   80 
LCS_GDT     A     304     A     304      8    8   12     3    6    7    8    8    8    8   12   13   14   16   22   24   28   32   43   48   56   68   73 
LCS_GDT     K     305     K     305      8    8   12     2    3    7    8    8   14   20   23   24   25   30   34   40   45   56   61   70   78   85   94 
LCS_GDT     S     306     S     306      3    4   12     2    3    3    4    5   17   22   23   24   33   36   40   48   57   66   69   77   83   90   94 
LCS_GDT     I     307     I     307      3    4   12     0    3    3    4    4    4    4    5    9   11   11   12   29   37   42   50   65   76   83   90 
LCS_GDT     R     308     R     308      3    3   12     0    3    3    3    3    4    4    5    9   11   11   14   17   22   42   48   58   73   79   88 
LCS_GDT     S     309     S     309      3    3   12     0    3    3    3    3    4    4    5    8   16   25   33   43   48   62   68   71   76   86   90 
LCS_GDT     T     310     T     310      3    3   10     0    3    3    3   13   13   16   20   24   27   30   32   41   48   52   63   69   74   80   84 
LCS_AVERAGE  LCS_A:   9.14  (   4.77    6.71   15.93 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     13     18     22     24     25     27     30     35     43     48     52     57     62     67     69     72     77     83     90     94 
GDT PERCENT_CA   5.58   7.73   9.44  10.30  10.73  11.59  12.88  15.02  18.45  20.60  22.32  24.46  26.61  28.76  29.61  30.90  33.05  35.62  38.63  40.34
GDT RMS_LOCAL    0.31   0.58   0.85   1.04   1.18   1.44   1.93   2.42   3.16   3.48   3.70   4.19   4.49   4.77   4.81   5.01   5.62   5.98   6.34   6.53
GDT RMS_ALL_CA  33.26  20.11  19.97  19.87  20.00  19.84  20.15  20.17  23.36  23.19  23.13  23.31  23.35  22.90  23.06  23.00  22.31  22.11  22.28  22.22

#      Molecule1      Molecule2       DISTANCE
LGA    C       4      C       4         36.287
LGA    V       5      V       5         32.209
LGA    A       6      A       6         28.413
LGA    E       7      E       7         28.384
LGA    E       8      E       8         25.557
LGA    P       9      P       9         29.895
LGA    I      10      I      10         26.525
LGA    K      11      K      11         25.903
LGA    K      12      K      12         21.819
LGA    I      13      I      13         24.131
LGA    A      14      A      14         23.531
LGA    I      15      I      15         27.021
LGA    F      16      F      16         28.243
LGA    G      17      G      17         32.061
LGA    G      18      G      18         35.400
LGA    T      19      T      19         36.736
LGA    H      20      H      20         42.678
LGA    G      21      G      21         41.842
LGA    N      22      N      22         47.749
LGA    E      23      E      23         47.865
LGA    L      24      L      24         46.445
LGA    T      25      T      25         45.292
LGA    G      26      G      26         39.115
LGA    V      27      V      27         37.656
LGA    F      28      F      28         39.747
LGA    L      29      L      29         37.212
LGA    V      30      V      30         31.286
LGA    T      31      T      31         31.186
LGA    H      32      H      32         33.692
LGA    W      33      W      33         29.335
LGA    L      34      L      34         24.520
LGA    K      35      K      35         27.661
LGA    N      36      N      36         29.467
LGA    G      37      G      37         24.905
LGA    A      38      A      38         27.263
LGA    E      39      E      39         29.226
LGA    V      40      V      40         23.567
LGA    H      41      H      41         22.691
LGA    R      42      R      42         27.474
LGA    A      43      A      43         27.578
LGA    G      44      G      44         26.780
LGA    L      45      L      45         23.956
LGA    E      46      E      46         22.469
LGA    V      47      V      47         25.218
LGA    K      48      K      48         24.951
LGA    P      49      P      49         28.547
LGA    F      50      F      50         28.150
LGA    I      51      I      51         31.067
LGA    T      52      T      52         28.823
LGA    N      53      N      53         31.862
LGA    P      54      P      54         33.290
LGA    R      55      R      55         34.765
LGA    A      56      A      56         33.894
LGA    V      57      V      57         32.832
LGA    E      58      E      58         34.787
LGA    K      59      K      59         35.873
LGA    C      60      C      60         33.987
LGA    T      61      T      61         27.789
LGA    R      62      R      62         24.834
LGA    Y      63      Y      63         24.059
LGA    I      64      I      64         22.870
LGA    D      65      D      65         16.818
LGA    C      66      C      66         11.697
LGA    D      67      D      67          8.832
LGA    L      68      L      68          9.195
LGA    N      69      N      69          7.759
LGA    R      70      R      70          2.567
LGA    V      71      V      71          4.148
LGA    F      72      F      72          3.215
LGA    D      73      D      73          8.186
LGA    L      74      L      74         12.311
LGA    E      75      E      75         14.799
LGA    N      76      N      76         13.941
LGA    L      77      L      77         13.061
LGA    S      78      S      78         13.985
LGA    K      79      K      79         16.007
LGA    E      80      E      80         17.161
LGA    M      81      M      81         17.721
LGA    S      82      S      82         20.672
LGA    E      83      E      83         23.310
LGA    D      84      D      84         24.896
LGA    L      85      L      85         26.648
LGA    P      86      P      86         23.644
LGA    Y      87      Y      87         21.712
LGA    E      88      E      88         19.185
LGA    V      89      V      89         19.881
LGA    R      90      R      90         19.855
LGA    R      91      R      91         17.219
LGA    A      92      A      92         15.650
LGA    Q      93      Q      93         16.138
LGA    E      94      E      94         14.839
LGA    I      95      I      95         12.511
LGA    N      96      N      96         12.354
LGA    H      97      H      97         12.067
LGA    L      98      L      98         10.308
LGA    F      99      F      99          8.424
LGA    G     100      G     100          9.228
LGA    P     101      P     101         12.720
LGA    K     102      K     102         15.268
LGA    N     103      N     103         14.057
LGA    S     104      S     104         10.641
LGA    D     105      D     105         10.545
LGA    D     106      D     106          8.729
LGA    A     107      A     107          5.904
LGA    Y     108      Y     108          3.979
LGA    D     109      D     109          3.423
LGA    V     110      V     110          3.873
LGA    V     111      V     111          1.578
LGA    F     112      F     112          1.208
LGA    D     113      D     113          3.663
LGA    L     114      L     114          3.901
LGA    H     115      H     115          8.273
LGA    N     116      N     116         11.700
LGA    T     117      T     117         18.310
LGA    T     118      T     118         21.242
LGA    S     119      S     119         27.892
LGA    N     120      N     120         28.203
LGA    M     121      M     121         24.101
LGA    G     122      G     122         19.767
LGA    C     123      C     123         15.767
LGA    T     124      T     124         15.917
LGA    L     125      L     125         11.822
LGA    I     126      I     126         12.770
LGA    L     127      L     127         10.129
LGA    E     128      E     128         11.376
LGA    D     129      D     129          9.228
LGA    S     130      S     130         12.483
LGA    R     131      R     131          9.458
LGA    N     132      N     132         10.308
LGA    D     133      D     133          8.380
LGA    F     134      F     134          9.325
LGA    L     135      L     135          6.394
LGA    I     136      I     136          3.768
LGA    Q     137      Q     137          5.203
LGA    M     138      M     138          4.221
LGA    F     139      F     139          2.317
LGA    H     140      H     140          5.593
LGA    Y     141      Y     141          7.965
LGA    I     142      I     142          6.711
LGA    K     143      K     143          9.689
LGA    T     144      T     144         13.128
LGA    C     145      C     145         13.582
LGA    M     146      M     146         14.063
LGA    A     147      A     147         17.949
LGA    P     148      P     148         17.443
LGA    L     149      L     149         15.533
LGA    P     150      P     150         17.368
LGA    C     151      C     151         14.538
LGA    S     152      S     152         17.179
LGA    V     153      V     153         14.842
LGA    Y     154      Y     154         16.828
LGA    L     155      L     155         16.094
LGA    I     156      I     156         17.716
LGA    E     157      E     157         19.009
LGA    H     158      H     158         21.672
LGA    P     159      P     159         21.892
LGA    S     160      S     160         22.009
LGA    L     161      L     161         22.245
LGA    K     162      K     162         16.494
LGA    Y     163      Y     163         13.410
LGA    A     164      A     164         14.244
LGA    T     165      T     165         17.594
LGA    T     166      T     166         19.803
LGA    R     167      R     167         18.354
LGA    S     168      S     168         11.223
LGA    I     169      I     169         12.359
LGA    A     170      A     170         17.018
LGA    K     171      K     171         15.259
LGA    Y     172      Y     172         12.806
LGA    P     173      P     173         10.506
LGA    V     174      V     174         10.447
LGA    G     175      G     175          9.129
LGA    I     176      I     176         13.225
LGA    E     177      E     177         12.874
LGA    V     178      V     178         17.805
LGA    G     179      G     179         17.674
LGA    P     180      P     180         18.596
LGA    Q     181      Q     181         12.257
LGA    P     182      P     182         10.837
LGA    H     183      H     183          9.577
LGA    G     184      G     184          4.920
LGA    V     185      V     185          3.742
LGA    L     186      L     186          3.451
LGA    R     187      R     187          4.452
LGA    A     188      A     188          3.850
LGA    D     189      D     189          3.603
LGA    I     190      I     190          3.024
LGA    L     191      L     191          2.024
LGA    D     192      D     192          1.832
LGA    Q     193      Q     193          1.556
LGA    M     194      M     194          1.202
LGA    R     195      R     195          1.067
LGA    R     196      R     196          0.855
LGA    M     197      M     197          1.072
LGA    L     198      L     198          0.998
LGA    K     199      K     199          0.955
LGA    H     200      H     200          1.230
LGA    A     201      A     201          1.756
LGA    L     202      L     202          1.531
LGA    D     203      D     203          1.523
LGA    F     204      F     204          1.805
LGA    I     205      I     205          1.531
LGA    Q     206      Q     206          1.510
LGA    R     207      R     207          2.031
LGA    F     208      F     208          2.144
LGA    N     209      N     209          0.976
LGA    E     210      E     210          6.056
LGA    G     211      G     211          8.787
LGA    K     212      K     212         11.944
LGA    E     213      E     213         14.618
LGA    F     214      F     214         14.760
LGA    P     215      P     215         18.116
LGA    P     216      P     216         19.824
LGA    C     217      C     217         19.556
LGA    A     218      A     218         16.238
LGA    I     219      I     219         15.470
LGA    D     220      D     220         14.450
LGA    V     221      V     221         15.791
LGA    Y     222      Y     222         17.816
LGA    K     223      K     223         20.504
LGA    T     298      T     298         23.502
LGA    K     299      K     299         26.745
LGA    L     300      L     300         22.465
LGA    T     301      T     301         23.907
LGA    L     302      L     302         19.792
LGA    N     303      N     303         20.649
LGA    A     304      A     304         18.979
LGA    K     305      K     305         15.921
LGA    S     306      S     306         14.654
LGA    I     307      I     307         13.354
LGA    R     308      R     308         13.395
LGA    S     309      S     309         11.379
LGA    T     310      T     310         13.423

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  233  233    4.0     35    2.42    15.987    13.872     1.388

LGA_LOCAL      RMSD =  2.421  Number of atoms =   35  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 20.179  Number of atoms =  233 
Std_ALL_ATOMS  RMSD = 18.046  (standard rmsd on all 233 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.535532 * X  +   0.758743 * Y  +  -0.370830 * Z  +  20.999975
  Y_new =   0.837220 * X  +   0.534574 * Y  +  -0.115295 * Z  +  25.407106
  Z_new =   0.110757 * X  +  -0.372210 * Y  +  -0.921516 * Z  +   2.784985 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -2.757720    0.383873  [ DEG:  -158.0057     21.9943 ]
  Theta =  -0.110985   -3.030608  [ DEG:    -6.3590   -173.6410 ]
  Phi   =   2.139865   -1.001728  [ DEG:   122.6052    -57.3948 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0289TS599_1-D1                               
REMARK     2: T0289_D1.pdb                                  
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0289TS599_1-D1.T0289_D1.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  233  233   4.0   35   2.42  13.872    18.05
REMARK  ---------------------------------------------------------- 
MOLECULE T0289TS599_1-D1
PFRMAT TS                                                                       
TARGET T0289                                                                    
MODEL  1                                                                        
PARENT N/A                                                                      
ATOM      4  CA  CYS     4       1.937  17.035  -7.807  1.00  0.00              
ATOM      5  CA  VAL     5       1.956  15.127  -4.544  1.00  0.00              
ATOM      6  CA  ALA     6       4.648  12.551  -4.167  1.00  0.00              
ATOM      7  CA  GLU     7       3.704   9.217  -2.540  1.00  0.00              
ATOM      8  CA  GLU     8       6.776   8.521  -0.395  1.00  0.00              
ATOM      9  CA  PRO     9       6.291   9.364   3.147  1.00  0.00              
ATOM     10  CA  ILE    10       8.944  12.016   3.564  1.00  0.00              
ATOM     11  CA  LYS    11       7.775  15.696   2.784  1.00  0.00              
ATOM     12  CA  LYS    12       8.763  16.869  -0.923  1.00  0.00              
ATOM     13  CA  ILE    13       5.918  17.931  -3.182  1.00  0.00              
ATOM     14  CA  ALA    14       6.624  18.414  -6.838  1.00  0.00              
ATOM     15  CA  ILE    15       4.256  20.718  -8.561  1.00  0.00              
ATOM     16  CA  PHE    16       4.085  20.685 -12.472  1.00  0.00              
ATOM     17  CA  GLY    17       1.309  23.283 -14.132  1.00  0.00              
ATOM     18  CA  GLY    18       0.171  23.241 -17.477  1.00  0.00              
ATOM     19  CA  THR    19      -0.150  19.611 -18.431  1.00  0.00              
ATOM     20  CA  HIS    20      -3.119  19.909 -20.638  1.00  0.00              
ATOM     21  CA  GLY    21      -4.086  23.583 -20.903  1.00  0.00              
ATOM     22  CA  ASN    22      -7.881  23.341 -20.824  1.00  0.00              
ATOM     23  CA  GLU    23      -8.220  20.999 -17.871  1.00  0.00              
ATOM     24  CA  LEU    24      -8.774  23.356 -15.035  1.00  0.00              
ATOM     25  CA  THR    25      -7.260  22.522 -11.631  1.00  0.00              
ATOM     26  CA  GLY    26      -3.698  23.405 -13.214  1.00  0.00              
ATOM     27  CA  VAL    27      -4.752  26.835 -14.733  1.00  0.00              
ATOM     28  CA  PHE    28      -6.157  28.071 -11.752  1.00  0.00              
ATOM     29  CA  LEU    29      -3.297  27.028  -9.651  1.00  0.00              
ATOM     30  CA  VAL    30      -0.950  28.536 -11.951  1.00  0.00              
ATOM     31  CA  THR    31      -2.654  31.789 -11.905  1.00  0.00              
ATOM     32  CA  HIS    32      -2.747  31.914  -8.218  1.00  0.00              
ATOM     33  CA  TRP    33       0.865  31.327  -8.042  1.00  0.00              
ATOM     34  CA  LEU    34       1.520  34.019 -10.517  1.00  0.00              
ATOM     35  CA  LYS    35      -0.515  36.673  -8.596  1.00  0.00              
ATOM     36  CA  ASN    36       1.444  35.911  -5.456  1.00  0.00              
ATOM     37  CA  GLY    37       4.769  36.229  -6.936  1.00  0.00              
ATOM     38  CA  ALA    38       4.775  39.522  -8.725  1.00  0.00              
ATOM     39  CA  GLU    39       3.861  39.471 -12.240  1.00  0.00              
ATOM     40  CA  VAL    40       7.397  39.335 -13.694  1.00  0.00              
ATOM     41  CA  HIS    41       8.226  36.133 -11.688  1.00  0.00              
ATOM     42  CA  ARG    42       5.040  34.553 -12.794  1.00  0.00              
ATOM     43  CA  ALA    43       5.348  34.569 -16.577  1.00  0.00              
ATOM     44  CA  GLY    44       3.617  31.207 -16.921  1.00  0.00              
ATOM     45  CA  LEU    45       4.511  29.679 -13.562  1.00  0.00              
ATOM     46  CA  GLU    46       3.879  26.288 -12.459  1.00  0.00              
ATOM     47  CA  VAL    47       2.577  25.589  -8.817  1.00  0.00              
ATOM     48  CA  LYS    48       3.361  22.073  -7.411  1.00  0.00              
ATOM     49  CA  PRO    49       2.200  21.189  -4.026  1.00  0.00              
ATOM     50  CA  PHE    50       4.051  18.216  -2.438  1.00  0.00              
ATOM     51  CA  ILE    51       2.817  17.054   0.890  1.00  0.00              
ATOM     52  CA  THR    52       5.590  15.022   2.802  1.00  0.00              
ATOM     53  CA  ASN    53       4.413  14.258   6.362  1.00  0.00              
ATOM     54  CA  PRO    54       2.005  17.081   7.004  1.00  0.00              
ATOM     55  CA  ARG    55       1.618  16.423  10.663  1.00  0.00              
ATOM     56  CA  ALA    56       5.263  16.254  11.360  1.00  0.00              
ATOM     57  CA  VAL    57       5.838  19.501   9.583  1.00  0.00              
ATOM     58  CA  GLU    58       3.176  21.261  11.436  1.00  0.00              
ATOM     59  CA  LYS    59       4.594  20.051  14.642  1.00  0.00              
ATOM     60  CA  CYS    60       8.038  20.819  13.795  1.00  0.00              
ATOM     61  CA  THR    61       7.287  24.095  12.712  1.00  0.00              
ATOM     62  CA  ARG    62       5.395  24.897  15.992  1.00  0.00              
ATOM     63  CA  TYR    63       8.116  23.806  18.200  1.00  0.00              
ATOM     64  CA  ILE    64      10.765  25.922  16.765  1.00  0.00              
ATOM     65  CA  ASP    65       8.759  29.132  16.799  1.00  0.00              
ATOM     66  CA  CYS    66      11.056  31.920  17.381  1.00  0.00              
ATOM     67  CA  ASP    67      14.001  33.203  15.344  1.00  0.00              
ATOM     68  CA  LEU    68      13.177  31.502  11.948  1.00  0.00              
ATOM     69  CA  ASN    69       9.464  32.874  12.032  1.00  0.00              
ATOM     70  CA  ARG    70      10.781  36.463  12.193  1.00  0.00              
ATOM     71  CA  VAL    71      13.293  36.121   9.303  1.00  0.00              
ATOM     72  CA  PHE    72      10.739  34.856   6.844  1.00  0.00              
ATOM     73  CA  ASP    73       8.118  36.593   7.305  1.00  0.00              
ATOM     74  CA  LEU    74       7.061  38.480   3.866  1.00  0.00              
ATOM     75  CA  GLU    75       6.205  41.852   4.886  1.00  0.00              
ATOM     76  CA  ASN    76       8.789  44.191   3.770  1.00  0.00              
ATOM     77  CA  LEU    77      10.044  42.614   0.723  1.00  0.00              
ATOM     78  CA  SER    78       6.847  41.325  -0.827  1.00  0.00              
ATOM     79  CA  LYS    79       5.121  44.557  -1.726  1.00  0.00              
ATOM     80  CA  GLU    80       3.823  45.874  -5.023  1.00  0.00              
ATOM     81  CA  MET    81       5.837  48.632  -5.592  1.00  0.00              
ATOM     82  CA  SER    82       3.460  51.478  -6.402  1.00  0.00              
ATOM     83  CA  GLU    83       5.469  53.708  -8.808  1.00  0.00              
ATOM     84  CA  ASP    84       6.015  56.795  -6.482  1.00  0.00              
ATOM     85  CA  LEU    85       9.590  57.644  -7.382  1.00  0.00              
ATOM     86  CA  PRO    86      11.351  58.474  -4.256  1.00  0.00              
ATOM     87  CA  TYR    87      14.882  57.829  -5.074  1.00  0.00              
ATOM     88  CA  GLU    88      15.586  55.817  -2.227  1.00  0.00              
ATOM     89  CA  VAL    89      12.568  53.655  -3.062  1.00  0.00              
ATOM     90  CA  ARG    90      13.605  53.358  -6.607  1.00  0.00              
ATOM     91  CA  ARG    91      17.121  52.265  -5.666  1.00  0.00              
ATOM     92  CA  ALA    92      15.737  49.542  -3.300  1.00  0.00              
ATOM     93  CA  GLN    93      13.418  48.250  -5.855  1.00  0.00              
ATOM     94  CA  GLU    94      16.261  47.917  -8.497  1.00  0.00              
ATOM     95  CA  ILE    95      18.551  46.129  -6.115  1.00  0.00              
ATOM     96  CA  ASN    96      15.838  43.663  -5.107  1.00  0.00              
ATOM     97  CA  HIS    97      14.961  42.947  -8.724  1.00  0.00              
ATOM     98  CA  LEU    98      18.594  42.307  -9.599  1.00  0.00              
ATOM     99  CA  PHE    99      19.337  40.075  -6.626  1.00  0.00              
ATOM    100  CA  GLY   100      16.282  38.029  -6.847  1.00  0.00              
ATOM    101  CA  PRO   101      16.720  37.221 -10.605  1.00  0.00              
ATOM    102  CA  LYS   102      20.428  36.387 -10.238  1.00  0.00              
ATOM    103  CA  ASN   103      19.888  34.031  -7.265  1.00  0.00              
ATOM    104  CA  SER   104      17.164  31.934  -8.463  1.00  0.00              
ATOM    105  CA  ASP   105      18.611  30.983 -11.819  1.00  0.00              
ATOM    106  CA  ASP   106      22.204  30.174 -10.860  1.00  0.00              
ATOM    107  CA  ALA   107      21.768  27.442  -8.329  1.00  0.00              
ATOM    108  CA  TYR   108      23.363  28.855  -5.474  1.00  0.00              
ATOM    109  CA  ASP   109      22.499  27.828  -1.903  1.00  0.00              
ATOM    110  CA  VAL   110      22.865  30.345   0.550  1.00  0.00              
ATOM    111  CA  VAL   111      22.606  34.641  -0.596  1.00  0.00              
ATOM    112  CA  PHE   112      24.575  36.391   1.424  1.00  0.00              
ATOM    113  CA  ASP   113      23.529  40.520   0.568  1.00  0.00              
ATOM    114  CA  LEU   114      26.136  42.969   1.033  1.00  0.00              
ATOM    115  CA  HIS   115      24.939  46.522   0.408  1.00  0.00              
ATOM    116  CA  ASN   116      27.660  48.717  -0.992  1.00  0.00              
ATOM    117  CA  THR   117      26.771  51.330  -3.455  1.00  0.00              
ATOM    118  CA  THR   118      23.849  53.333  -4.055  1.00  0.00              
ATOM    119  CA  SER   119      23.430  53.497  -7.931  1.00  0.00              
ATOM    120  CA  ASN   120      23.100  49.868  -8.546  1.00  0.00              
ATOM    121  CA  MET   121      26.064  48.433  -6.521  1.00  0.00              
ATOM    122  CA  GLY   122      24.731  45.800  -4.001  1.00  0.00              
ATOM    123  CA  CYS   123      26.666  43.539  -3.807  1.00  0.00              
ATOM    124  CA  THR   124      25.298  39.514  -3.822  1.00  0.00              
ATOM    125  CA  LEU   125      27.216  37.108  -2.637  1.00  0.00              
ATOM    126  CA  ILE   126      26.278  33.129  -3.192  1.00  0.00              
ATOM    127  CA  LEU   127      27.332  30.655  -1.088  1.00  0.00              
ATOM    128  CA  GLU   128      27.371  26.695  -1.886  1.00  0.00              
ATOM    129  CA  ASP   129      28.841  24.542  -0.000  1.00  0.00              
ATOM    130  CA  SER   130      31.338  22.101  -1.775  1.00  0.00              
ATOM    131  CA  ARG   131      34.368  21.741   0.525  1.00  0.00              
ATOM    132  CA  ASN   132      36.955  23.286  -1.651  1.00  0.00              
ATOM    133  CA  ASP   133      39.526  24.839   0.697  1.00  0.00              
ATOM    134  CA  PHE   134      39.570  28.269  -0.797  1.00  0.00              
ATOM    135  CA  LEU   135      35.799  28.589  -0.606  1.00  0.00              
ATOM    136  CA  ILE   136      35.798  27.437   2.900  1.00  0.00              
ATOM    137  CA  GLN   137      38.138  29.915   3.983  1.00  0.00              
ATOM    138  CA  MET   138      35.945  32.468   2.532  1.00  0.00              
ATOM    139  CA  PHE   139      33.263  31.443   4.208  1.00  0.00              
ATOM    140  CA  HIS   140      34.523  31.776   7.144  1.00  0.00              
ATOM    141  CA  TYR   141      35.488  35.014   6.816  1.00  0.00              
ATOM    142  CA  ILE   142      32.414  36.176   5.643  1.00  0.00              
ATOM    143  CA  LYS   143      30.529  34.541   8.599  1.00  0.00              
ATOM    144  CA  THR   144      32.515  36.595  11.069  1.00  0.00              
ATOM    145  CA  CYS   145      31.821  39.830   9.219  1.00  0.00              
ATOM    146  CA  MET   146      28.058  39.369   8.865  1.00  0.00              
ATOM    147  CA  ALA   147      27.437  38.838  12.491  1.00  0.00              
ATOM    148  CA  PRO   148      28.978  42.047  13.465  1.00  0.00              
ATOM    149  CA  LEU   149      27.003  44.046  10.929  1.00  0.00              
ATOM    150  CA  PRO   150      23.521  42.778  10.716  1.00  0.00              
ATOM    151  CA  CYS   151      23.664  41.324   8.021  1.00  0.00              
ATOM    152  CA  SER   152      20.549  39.854   5.496  1.00  0.00              
ATOM    153  CA  VAL   153      20.663  36.673   4.921  1.00  0.00              
ATOM    154  CA  TYR   154      18.520  34.948   1.695  1.00  0.00              
ATOM    155  CA  LEU   155      17.910  31.723   1.733  1.00  0.00              
ATOM    156  CA  ILE   156      17.357  29.649  -1.872  1.00  0.00              
ATOM    157  CA  GLU   157      15.962  26.815  -2.385  1.00  0.00              
ATOM    158  CA  HIS   158      17.887  24.840  -5.079  1.00  0.00              
ATOM    159  CA  PRO   159      15.475  24.872  -8.069  1.00  0.00              
ATOM    160  CA  SER   160      12.654  23.367  -6.249  1.00  0.00              
ATOM    161  CA  LEU   161      14.321  20.157  -4.924  1.00  0.00              
ATOM    162  CA  LYS   162      12.994  19.917  -1.405  1.00  0.00              
ATOM    163  CA  TYR   163      14.428  17.260   0.815  1.00  0.00              
ATOM    164  CA  ALA   164      12.191  17.533   4.092  1.00  0.00              
ATOM    165  CA  THR   165      12.801  15.826   6.621  1.00  0.00              
ATOM    166  CA  THR   166      11.251  16.529  10.330  1.00  0.00              
ATOM    167  CA  ARG   167      14.446  17.607  11.882  1.00  0.00              
ATOM    168  CA  SER   168      15.381  19.876   9.085  1.00  0.00              
ATOM    169  CA  ILE   169      11.964  21.566   9.079  1.00  0.00              
ATOM    170  CA  ALA   170      12.060  22.213  12.830  1.00  0.00              
ATOM    171  CA  LYS   171      15.558  23.717  12.757  1.00  0.00              
ATOM    172  CA  TYR   172      15.510  25.633   9.564  1.00  0.00              
ATOM    173  CA  PRO   173      15.704  29.302  10.009  1.00  0.00              
ATOM    174  CA  VAL   174      15.982  31.738   6.753  1.00  0.00              
ATOM    175  CA  GLY   175      16.372  34.803   7.110  1.00  0.00              
ATOM    176  CA  ILE   176      14.856  37.486   4.244  1.00  0.00              
ATOM    177  CA  GLU   177      16.099  40.824   4.006  1.00  0.00              
ATOM    178  CA  VAL   178      13.995  43.486   2.278  1.00  0.00              
ATOM    179  CA  GLY   179      16.167  46.530   2.062  1.00  0.00              
ATOM    180  CA  PRO   180      15.846  49.955   3.556  1.00  0.00              
ATOM    181  CA  GLN   181      17.750  49.457   6.854  1.00  0.00              
ATOM    182  CA  PRO   182      20.561  47.734   5.577  1.00  0.00              
ATOM    183  CA  HIS   183      21.647  49.984   2.737  1.00  0.00              
ATOM    184  CA  GLY   184      21.461  53.088   4.858  1.00  0.00              
ATOM    185  CA  VAL   185      23.098  52.200   7.829  1.00  0.00              
ATOM    186  CA  LEU   186      26.804  50.844   6.791  1.00  0.00              
ATOM    187  CA  ARG   187      29.030  50.404   8.960  1.00  0.00              
ATOM    188  CA  ALA   188      32.335  51.418   7.302  1.00  0.00              
ATOM    189  CA  ASP   189      34.597  48.829   8.922  1.00  0.00              
ATOM    190  CA  ILE   190      32.078  46.050   8.044  1.00  0.00              
ATOM    191  CA  LEU   191      31.934  47.391   4.411  1.00  0.00              
ATOM    192  CA  ASP   192      35.627  47.172   3.852  1.00  0.00              
ATOM    193  CA  GLN   193      35.489  43.661   5.139  1.00  0.00              
ATOM    194  CA  MET   194      32.674  42.707   2.803  1.00  0.00              
ATOM    195  CA  ARG   195      34.204  44.060  -0.157  1.00  0.00              
ATOM    196  CA  ARG   196      37.238  41.954   0.348  1.00  0.00              
ATOM    197  CA  MET   197      35.328  38.852   1.106  1.00  0.00              
ATOM    198  CA  LEU   198      33.097  39.065  -1.884  1.00  0.00              
ATOM    199  CA  LYS   199      35.751  39.568  -4.502  1.00  0.00              
ATOM    200  CA  HIS   200      37.694  36.613  -3.204  1.00  0.00              
ATOM    201  CA  ALA   201      34.472  34.386  -3.434  1.00  0.00              
ATOM    202  CA  LEU   202      33.668  35.380  -6.807  1.00  0.00              
ATOM    203  CA  ASP   203      37.085  34.445  -7.982  1.00  0.00              
ATOM    204  CA  PHE   204      37.023  31.136  -6.257  1.00  0.00              
ATOM    205  CA  ILE   205      33.786  30.361  -7.737  1.00  0.00              
ATOM    206  CA  GLN   206      34.931  31.274 -11.233  1.00  0.00              
ATOM    207  CA  ARG   207      37.893  28.926 -11.067  1.00  0.00              
ATOM    208  CA  PHE   208      36.569  25.583  -9.769  1.00  0.00              
ATOM    209  CA  ASN   209      33.286  25.366 -11.732  1.00  0.00              
ATOM    210  CA  GLU   210      32.966  21.540 -11.853  1.00  0.00              
ATOM    211  CA  GLY   211      29.346  21.225 -10.872  1.00  0.00              
ATOM    212  CA  LYS   212      29.653  18.704  -8.467  1.00  0.00              
ATOM    213  CA  GLU   213      26.436  18.641  -6.101  1.00  0.00              
ATOM    214  CA  PHE   214      26.563  19.134  -3.086  1.00  0.00              
ATOM    215  CA  PRO   215      25.336  16.172  -0.437  1.00  0.00              
ATOM    216  CA  PRO   216      22.068  16.917   0.889  1.00  0.00              
ATOM    217  CA  CYS   217      22.696  16.718   4.453  1.00  0.00              
ATOM    218  CA  ALA   218      25.544  17.799   4.744  1.00  0.00              
ATOM    219  CA  ILE   219      28.187  15.537   6.973  1.00  0.00              
ATOM    220  CA  ASP   220      31.703  16.273   7.151  1.00  0.00              
ATOM    221  CA  VAL   221      34.137  13.598   8.834  1.00  0.00              
ATOM    222  CA  TYR   222      37.377  14.413   9.878  1.00  0.00              
ATOM    223  CA  LYS   223      39.413  11.542  10.968  1.00  0.00              
ATOM    298  CA  THR   298      22.418   6.618  18.100  1.00  0.00              
ATOM    299  CA  LYS   299      22.018   4.551  14.859  1.00  0.00              
ATOM    300  CA  LEU   300      23.578   6.297  12.032  1.00  0.00              
ATOM    301  CA  THR   301      23.014   5.201   8.544  1.00  0.00              
ATOM    302  CA  LEU   302      25.710   5.887   5.957  1.00  0.00              
ATOM    303  CA  ASN   303      25.053   5.061   2.298  1.00  0.00              
ATOM    304  CA  ALA   304      27.890   3.717   0.371  1.00  0.00              
ATOM    305  CA  LYS   305      27.559   6.204  -2.571  1.00  0.00              
ATOM    306  CA  SER   306      27.553   9.144  -0.176  1.00  0.00              
ATOM    307  CA  ILE   307      30.632   7.939   1.569  1.00  0.00              
ATOM    308  CA  ARG   308      32.458   7.464  -1.578  1.00  0.00              
ATOM    309  CA  SER   309      31.868  10.991  -2.487  1.00  0.00              
ATOM    310  CA  THR   310      33.854  11.530   1.241  1.00  0.00              
TER                                                                             
END
