
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  --------------- 06/2006            #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

# Molecule1: number of CA atoms  108 (  108),  selected  108 , name T0283TS383_3
# Molecule2: number of CA atoms  112 (  888),  selected  108 , name T0283.pdb
# PARAMETERS: T0283TS383_3.T0283.pdb  -3  -ie  -o1  -sda  -d:4  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    32        78 - 109         4.82    14.60
  LONGEST_CONTINUOUS_SEGMENT:    32        79 - 110         4.91    14.99
  LCS_AVERAGE:     26.46

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    26         2 - 27          1.88    16.53
  LCS_AVERAGE:     14.56

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    20        53 - 72          0.48    24.61
  LCS_AVERAGE:     10.71

LCS_GDT    MOLECULE-1    MOLECULE-2    LENGTH_OF_THE
LCS_GDT     RESIDUE       RESIDUE         CONTINUOUS
LCS_GDT   NAME NUMBER   NAME NUMBER          SEGMENT     GLOBAL DISTANCE TEST - GDT_DATA_COLUMNS                             NUMBER OF THE RESIDUES:  112
LCS_GDT     S       2     S       2      9   26   30     6    8   12   18   25   26   26   26   27   29   29   31   33   37   39   46   51   57   61   63 
LCS_GDT     F       3     F       3      9   26   30     6    8    9   15   25   26   26   26   27   29   29   31   33   37   39   43   51   57   58   63 
LCS_GDT     I       4     I       4      9   26   30     6    8    9   13   24   26   26   26   26   28   29   30   31   35   39   46   51   57   59   63 
LCS_GDT     E       5     E       5      9   26   30     6    8    9   13   25   26   26   26   27   29   29   31   33   37   39   46   52   57   61   63 
LCS_GDT     K       6     K       6      9   26   30     6    8   14   18   25   26   26   26   27   29   29   31   33   37   39   46   52   57   61   63 
LCS_GDT     M       7     M       7      9   26   30     6    8    9   15   25   26   26   26   27   29   29   31   33   37   39   46   51   57   59   63 
LCS_GDT     I       8     I       8      9   26   30     6    8    9   13   25   26   26   26   27   29   29   31   33   37   39   46   52   57   61   63 
LCS_GDT     G       9     G       9     19   26   30     6    8    9   13   25   26   26   26   27   29   29   31   36   38   43   47   52   57   61   63 
LCS_GDT     S      10     S      10     19   26   30    16   18   18   18   25   26   26   26   27   29   29   31   36   38   43   47   52   57   61   63 
LCS_GDT     L      11     L      11     19   26   30    16   18   18   18   25   26   26   26   27   29   29   31   33   37   39   47   52   57   61   63 
LCS_GDT     N      12     N      12     19   26   30    16   18   18   18   25   26   26   26   27   29   29   31   33   37   39   40   41   55   58   62 
LCS_GDT     D      13     D      13     19   26   30    16   18   18   18   25   26   26   26   27   29   29   31   33   37   43   47   52   57   61   63 
LCS_GDT     K      14     K      14     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     R      15     R      15     19   26   30    16   18   18   18   25   26   26   26   27   29   29   31   33   37   42   47   52   57   61   63 
LCS_GDT     E      16     E      16     19   26   30    16   18   18   18   25   26   26   26   27   29   29   31   33   37   42   47   52   57   61   63 
LCS_GDT     W      17     W      17     19   26   30    12   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     K      18     K      18     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     A      19     A      19     19   26   30    16   18   18   18   25   26   26   26   27   29   29   34   36   38   43   47   52   57   61   63 
LCS_GDT     M      20     M      20     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     E      21     E      21     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     A      22     A      22     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     R      23     R      23     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     A      24     A      24     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     K      25     K      25     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     A      26     A      26     19   26   30    16   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     L      27     L      27     19   26   30    12   18   18   18   25   26   26   26   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     P      28     P      28      3    3   30     3    3    3    3    4    6    8   15   17   22   25   31   33   38   43   47   52   57   61   63 
LCS_GDT     K      29     K      29      3    4   30     3    3    3    4    4    6   12   13   19   22   25   30   33   38   43   46   52   57   61   63 
LCS_GDT     E      30     E      30      3   10   30     3    3    3    4    8   10   13   14   19   20   23   25   29   30   34   35   40   43   50   56 
LCS_GDT     Y      31     Y      31      9   10   30     8    9    9    9    9   10   10   12   14   16   18   22   25   28   32   34   38   42   42   56 
LCS_GDT     H      32     H      32      9   10   22     8    9    9    9    9   10   10   12   13   16   19   23   29   30   34   35   39   43   50   56 
LCS_GDT     H      33     H      33      9   10   22     8    9    9    9    9   10   10   11   15   17   21   27   31   34   39   40   40   43   50   56 
LCS_GDT     A      34     A      34      9   10   22     8    9    9    9    9   10   12   17   21   23   27   31   33   37   39   40   41   43   50   56 
LCS_GDT     Y      35     Y      35      9   10   22     8    9    9    9    9   10   11   17   21   23   27   31   33   37   39   40   41   53   61   62 
LCS_GDT     K      36     K      36      9   10   22     8    9    9    9    9   10   10   12   15   19   26   31   33   37   39   40   47   55   61   63 
LCS_GDT     A      37     A      37      9   10   22     8    9    9    9    9   10   16   21   27   29   29   31   33   37   39   40   44   47   61   62 
LCS_GDT     I      38     I      38      9   10   22     8    9    9   11   16   22   24   25   27   29   29   31   33   37   39   40   41   47   61   62 
LCS_GDT     Q      39     Q      39      9   10   23     4    9    9    9    9   11   21   24   27   29   29   31   33   38   43   47   52   57   61   63 
LCS_GDT     K      40     K      40      3   10   23     3    3    4    6    9   10   11   16   18   28   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     Y      41     Y      41      3    6   24     3    3    5    5    6    9   10   14   19   20   26   31   33   38   43   47   52   55   61   63 
LCS_GDT     T      44     T      44      3    6   24     0    2    3    5   10   13   21   24   27   28   29   31   33   37   40   46   52   55   61   63 
LCS_GDT     S      45     S      45      3    6   30     1    3    4    7   10   16   21   24   27   29   29   31   33   37   39   40   41   43   49   54 
LCS_GDT     G      46     G      46      3    7   30     1    3    5    7    9    9   12   15   18   21   26   30   33   37   39   40   41   42   49   54 
LCS_GDT     G      47     G      47      3    7   30     0    3    5    7    9   10   13   17   19   23   26   30   33   37   39   40   41   42   49   54 
LCS_GDT     P      48     P      48      3    7   30     3    3    3    5    5    9   13   17   19   23   26   26   29   34   37   40   40   42   49   54 
LCS_GDT     T      49     T      49      3    7   30     3    3    5    7    9   10   13   17   19   23   26   26   31   34   37   40   40   42   49   54 
LCS_GDT     D      50     D      50      3    7   30     3    3    5    7    9   10   13   17   19   23   26   26   27   29   31   34   39   42   49   54 
LCS_GDT     W      51     W      51      3    7   30     3    3    4    7    9    9   13   17   19   23   26   26   27   29   29   32   35   39   44   51 
LCS_GDT     Q      52     Q      52      3   21   30     3    3    5    7    9   11   19   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     D      53     D      53     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     T      54     T      54     20   21   30    15   20   20   20   20   20   20   21   22   22   22   25   27   28   29   30   32   37   42   44 
LCS_GDT     K      55     K      55     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   28   29   32   35   39   42   44 
LCS_GDT     R      56     R      56     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     I      57     I      57     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     F      58     F      58     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   28   29   32   35   39   42   44 
LCS_GDT     G      59     G      59     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   39   42   44 
LCS_GDT     G      60     G      60     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     I      61     I      61     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     L      62     L      62     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   39   44   53 
LCS_GDT     D      63     D      63     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     L      64     L      64     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     F      65     F      65     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     E      66     E      66     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     E      67     E      67     20   21   30    15   20   20   20   20   20   20   21   22   22   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     G      68     G      68     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     A      69     A      69     20   21   30    11   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     A      70     A      70     20   21   30    15   20   20   20   20   20   20   21   22   22   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     E      71     E      71     20   21   30    15   20   20   20   20   20   20   21   22   22   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     G      72     G      72     20   21   30    15   20   20   20   20   20   20   21   22   23   26   26   27   29   29   32   35   42   49   54 
LCS_GDT     K      73     K      73      3   21   30     3    3    3    4    9   13   19   20   22   23   26   26   27   29   29   32   35   41   49   54 
LCS_GDT     K      74     K      74      7    8   30     6    6    7    8    8    9   12   17   17   21   24   26   27   29   29   32   36   42   49   55 
LCS_GDT     V      75     V      75      7    8   30     6    6    7    8    8    9    9   11   14   16   19   22   30   36   43   47   52   55   61   63 
LCS_GDT     T      76     T      76      7    8   28     6    6    7    8    8    9    9   11   14   16   19   22   25   30   34   46   51   55   61   63 
LCS_GDT     D      77     D      77      7    8   26     6    6    7    8    8    9    9   11   14   16   19   20   22   32   39   46   51   55   61   62 
LCS_GDT     L      78     L      78      7    8   32     6    6    7    8    8   18   20   23   27   28   32   34   37   38   43   47   52   55   61   63 
LCS_GDT     T      79     T      79      7    8   32     6    9   11   11   12   16   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     G      80     G      80      7    8   32     4   12   12   12   12   15   19   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     E      81     E      81      3    3   32     0    3    6   12   12   14   18   23   28   29   30   34   37   38   42   47   52   57   61   63 
LCS_GDT     D      82     D      82      3   14   32     0    3    4    6    7   14   14   15   17   23   25   27   31   35   37   43   51   57   58   62 
LCS_GDT     V      83     V      83     11   14   32     9   10   12   13   13   14   16   18   20   24   25   28   31   34   38   46   51   57   59   63 
LCS_GDT     A      84     A      84     11   14   32     9   10   12   13   13   14   14   15   17   23   25   27   31   35   39   46   51   57   59   62 
LCS_GDT     A      85     A      85     11   14   32     9   10   12   13   13   14   14   15   17   23   25   27   31   34   36   38   40   45   58   61 
LCS_GDT     F      86     F      86     11   14   32     9   10   12   13   13   16   17   19   20   24   25   28   31   34   38   45   51   57   59   63 
LCS_GDT     C      87     C      87     11   14   32     9   10   12   13   14   15   17   20   24   25   30   33   37   38   43   47   52   57   61   63 
LCS_GDT     D      88     D      88     11   14   32     9   10   12   13   13   16   17   20   24   25   30   33   37   38   42   46   52   57   61   63 
LCS_GDT     E      89     E      89     11   14   32     9   10   12   13   13   14   17   19   22   24   28   30   32   35   38   46   51   57   61   63 
LCS_GDT     L      90     L      90     11   14   32     8   10   12   13   13   14   17   19   22   25   28   33   37   38   43   47   52   57   61   63 
LCS_GDT     M      91     M      91     11   14   32     9   10   12   13   13   16   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     K      92     K      92     11   14   32     9   10   12   13   13   16   17   20   27   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     D      93     D      93     11   14   32     4    4   12   13   13   14   17   19   22   24   28   30   37   38   42   47   52   57   61   63 
LCS_GDT     T      94     T      94      4   14   32     4    5   12   13   13   14   14   16   21   28   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     K      95     K      95      3   14   32     3    4    7   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     T      96     T      96     12   14   32     8   12   12   13   14   17   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     W      97     W      97     12   14   32    10   12   12   13   14   17   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     M      98     M      98     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     D      99     D      99     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     K     100     K     100     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     Y     101     Y     101     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     R     102     R     102     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     T     103     T     103     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     K     104     K     104     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     L     105     L     105     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   55   61   63 
LCS_GDT     N     106     N     106     12   14   32    10   12   12   13   14   18   20   25   28   29   32   34   37   38   43   47   52   55   61   63 
LCS_GDT     D     107     D     107     12   14   32     3    6   12   13   14   16   19   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     S     108     S     108      9   14   32     3    6    9   13   14   18   20   25   28   29   32   34   37   38   43   47   52   57   61   63 
LCS_GDT     I     109     I     109      3    3   32     3    3    4    4    4    4    5    6    8    8    9   11   14   18   30   35   39   57   59   63 
LCS_GDT     G     110     G     110      3    3   32     3    3    4    4    4    4    5    6    8    8    9   11   12   12   12   14   15   18   24   39 
LCS_GDT     R     111     R     111      3    3   12     3    3    4    4    4    4    5    6    8    8    9   11   12   12   12   14   15   16   19   20 
LCS_AVERAGE  LCS_A:  17.24  (  10.71   14.56   26.46 )

GLOBAL_DISTANCE_TEST (the largest set of residues that can fit under specified DISTANCE_CUTOFF)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_CA     16     20     20     20     25     26     26     26     28     29     32     34     37     38     43     47     52     57     61     63 
GDT PERCENT_CA  14.29  17.86  17.86  17.86  22.32  23.21  23.21  23.21  25.00  25.89  28.57  30.36  33.04  33.93  38.39  41.96  46.43  50.89  54.46  56.25
GDT RMS_LOCAL    0.29   0.48   0.48   0.48   1.78   1.88   1.88   1.88   3.05   2.78   3.62   3.79   4.14   4.23   5.23   5.39   5.94   6.63   6.77   6.94
GDT RMS_ALL_CA  18.30  24.61  24.61  24.61  16.56  16.53  16.53  16.53  15.16  17.02  14.78  14.84  14.78  14.79  14.14  14.23  14.03  14.58  13.66  13.95

#      Molecule1      Molecule2       DISTANCE
LGA    S       2      S       2          2.705
LGA    F       3      F       3          2.811
LGA    I       4      I       4          3.263
LGA    E       5      E       5          2.968
LGA    K       6      K       6          2.703
LGA    M       7      M       7          2.700
LGA    I       8      I       8          2.782
LGA    G       9      G       9          2.963
LGA    S      10      S      10          1.060
LGA    L      11      L      11          1.448
LGA    N      12      N      12          1.519
LGA    D      13      D      13          1.291
LGA    K      14      K      14          1.311
LGA    R      15      R      15          1.468
LGA    E      16      E      16          1.591
LGA    W      17      W      17          1.519
LGA    K      18      K      18          1.208
LGA    A      19      A      19          1.107
LGA    M      20      M      20          1.009
LGA    E      21      E      21          0.963
LGA    A      22      A      22          0.698
LGA    R      23      R      23          0.812
LGA    A      24      A      24          1.100
LGA    K      25      K      25          1.231
LGA    A      26      A      26          1.106
LGA    L      27      L      27          0.683
LGA    P      28      P      28         11.621
LGA    K      29      K      29         12.782
LGA    E      30      E      30         17.546
LGA    Y      31      Y      31         19.978
LGA    H      32      H      32         18.469
LGA    H      33      H      33         17.318
LGA    A      34      A      34         15.566
LGA    Y      35      Y      35         13.843
LGA    K      36      K      36         13.151
LGA    A      37      A      37         11.615
LGA    I      38      I      38          9.701
LGA    Q      39      Q      39          7.528
LGA    K      40      K      40          7.109
LGA    Y      41      Y      41         11.731
LGA    T      44      T      44          8.776
LGA    S      45      S      45         11.027
LGA    G      46      G      46         17.759
LGA    G      47      G      47         18.336
LGA    P      48      P      48         21.007
LGA    T      49      T      49         19.718
LGA    D      50      D      50         20.750
LGA    W      51      W      51         22.777
LGA    Q      52      Q      52         22.957
LGA    D      53      D      53         24.390
LGA    T      54      T      54         22.935
LGA    K      55      K      55         23.341
LGA    R      56      R      56         24.831
LGA    I      57      I      57         23.768
LGA    F      58      F      58         22.830
LGA    G      59      G      59         24.060
LGA    G      60      G      60         24.507
LGA    I      61      I      61         22.872
LGA    L      62      L      62         23.464
LGA    D      63      D      63         25.092
LGA    L      64      L      64         24.114
LGA    F      65      F      65         22.956
LGA    E      66      E      66         24.828
LGA    E      67      E      67         25.756
LGA    G      68      G      68         23.492
LGA    A      69      A      69         24.103
LGA    A      70      A      70         26.101
LGA    E      71      E      71         25.230
LGA    G      72      G      72         23.515
LGA    K      73      K      73         21.560
LGA    K      74      K      74         18.216
LGA    V      75      V      75         12.302
LGA    T      76      T      76         15.161
LGA    D      77      D      77         13.820
LGA    L      78      L      78          6.981
LGA    T      79      T      79          7.967
LGA    G      80      G      80         12.733
LGA    E      81      E      81         13.186
LGA    D      82      D      82         17.632
LGA    V      83      V      83         16.438
LGA    A      84      A      84         17.816
LGA    A      85      A      85         21.461
LGA    F      86      F      86         18.323
LGA    C      87      C      87         13.872
LGA    D      88      D      88         16.946
LGA    E      89      E      89         19.292
LGA    L      90      L      90         15.134
LGA    M      91      M      91         12.243
LGA    K      92      K      92         17.150
LGA    D      93      D      93         17.151
LGA    T      94      T      94         11.927
LGA    K      95      K      95         11.599
LGA    T      96      T      96         17.526
LGA    W      97      W      97         17.462
LGA    M      98      M      98         17.536
LGA    D      99      D      99         17.533
LGA    K     100      K     100         18.481
LGA    Y     101      Y     101         19.186
LGA    R     102      R     102         18.919
LGA    T     103      T     103         19.209
LGA    K     104      K     104         20.418
LGA    L     105      L     105         20.620
LGA    N     106      N     106         19.994
LGA    D     107      D     107         18.859
LGA    S     108      S     108         21.426
LGA    I     109      I     109         23.187
LGA    G     110      G     110         22.533
LGA    R     111      R     111         22.844

#              N1   N2   DIST      N    RMSD    GDT_TS     LGA_S     LGA_Q 
SUMMARY(GDT)  108  112    4.0     26    1.88    25.223    22.390     1.313

LGA_LOCAL      RMSD =  1.880  Number of atoms =   26  DIST =   4.00
LGA_ALL_ATOMS  RMSD = 16.531  Number of atoms =  108 
Std_ALL_ATOMS  RMSD = 12.616  (standard rmsd on all 108 assigned CA atoms) 

Unitary ROTATION matrix and the shift VECTOR superimpose MOLECULES  (1=>2)
  X_new =  -0.858861 * X  +  -0.425688 * Y  +  -0.284862 * Z  +  79.684311
  Y_new =   0.095700 * X  +   0.412990 * Y  +  -0.905693 * Z  +   5.009764
  Z_new =   0.503189 * X  +  -0.805126 * Y  +  -0.313963 * Z  +  11.256911 

Euler angles from the ROTATION matrix (XYZ convention, two solutions)
  Psi   =  -1.942614    1.198979  [ DEG:  -111.3036     68.6964 ]
  Theta =  -0.527285   -2.614308  [ DEG:   -30.2112   -149.7888 ]
  Phi   =   3.030624   -0.110968  [ DEG:   173.6420     -6.3580 ]
 
# END of job
REMARK  ---------------------------------------------------------- 
REMARK   Citing LGA: 
REMARK   Zemla A., LGA - a Method for Finding 3D Similarities in  
REMARK   Protein Structures, Nucleic Acids Research, 2003, V. 31, 
REMARK   No. 13, pp. 3370-3374. 
REMARK  ---------------------------------------------------------- 
REMARK   Superimposed MOLECULES (1=>2)   Output: 1 molecule      
REMARK     1: T0283TS383_3                                  
REMARK     2: T0283.pdb                                     
REMARK   GDT and LCS analysis
REMARK   FIXED Atom-Atom correspondence
REMARK   LGA parameters: T0283TS383_3.T0283.pdb -3 -ie -o1 -sda -d:4 
REMARK   #CA        N1   N2  DIST    N   RMSD   LGA_S  RMSD_global
REMARK   SUMMARY:  108  112   4.0   26   1.88  22.390    12.62
REMARK  ---------------------------------------------------------- 
MOLECULE T0283TS383_3
PFRMAT TS
TARGET T0283
MODEL 3
PARENT 2fjcA
ATOM      1  CA  SER     2      26.409   6.992  22.961  1.00  0.00
ATOM      2  CA  PHE     3      27.885  10.251  21.582  1.00  0.00
ATOM      3  CA  ILE     4      30.735   8.526  19.698  1.00  0.00
ATOM      4  CA  GLU     5      27.922   6.720  17.952  1.00  0.00
ATOM      5  CA  LYS     6      25.563   9.635  17.367  1.00  0.00
ATOM      6  CA  MET     7      28.250  11.721  15.641  1.00  0.00
ATOM      7  CA  ILE     8      29.029   8.883  13.192  1.00  0.00
ATOM      8  CA  GLY     9      25.304   8.733  12.435  1.00  0.00
ATOM      9  CA  SER    10      27.775  12.959   9.544  1.00  0.00
ATOM     10  CA  LEU    11      26.218  10.111   7.578  1.00  0.00
ATOM     11  CA  ASN    12      23.089  12.229   7.300  1.00  0.00
ATOM     12  CA  ASP    13      25.139  15.327   6.497  1.00  0.00
ATOM     13  CA  LYS    14      27.097  13.616   3.730  1.00  0.00
ATOM     14  CA  ARG    15      23.764  12.420   2.349  1.00  0.00
ATOM     15  CA  GLU    16      22.449  15.985   2.088  1.00  0.00
ATOM     16  CA  TRP    17      25.908  16.954   0.812  1.00  0.00
ATOM     17  CA  LYS    18      25.507  14.566  -2.087  1.00  0.00
ATOM     18  CA  ALA    19      21.860  15.250  -2.988  1.00  0.00
ATOM     19  CA  MET    20      22.287  19.029  -2.979  1.00  0.00
ATOM     20  CA  GLU    21      25.484  18.827  -5.041  1.00  0.00
ATOM     21  CA  ALA    22      23.602  16.676  -7.563  1.00  0.00
ATOM     22  CA  ARG    23      20.696  19.102  -7.652  1.00  0.00
ATOM     23  CA  ALA    24      23.232  21.782  -8.463  1.00  0.00
ATOM     24  CA  LYS    25      24.492  19.617 -11.332  1.00  0.00
ATOM     25  CA  ALA    26      20.937  19.159 -12.615  1.00  0.00
ATOM     26  CA  LEU    27      20.459  22.930 -12.605  1.00  0.00
ATOM     27  CA  PRO    28      29.503  21.651  -7.791  1.00  0.00
ATOM     28  CA  LYS    29      32.347  22.948  -5.620  1.00  0.00
ATOM     29  CA  GLU    30      34.542  19.878  -5.196  1.00  0.00
ATOM     30  CA  TYR    31      37.671  20.638  -3.175  1.00  0.00
ATOM     31  CA  HIS    32      38.451  21.577   0.410  1.00  0.00
ATOM     32  CA  HIS    33      40.052  24.772  -0.876  1.00  0.00
ATOM     33  CA  ALA    34      36.735  25.856  -2.381  1.00  0.00
ATOM     34  CA  TYR    35      34.761  24.726   0.651  1.00  0.00
ATOM     35  CA  LYS    36      36.962  26.717   3.030  1.00  0.00
ATOM     36  CA  ALA    37      36.480  29.709   0.737  1.00  0.00
ATOM     37  CA  ILE    38      32.677  29.385   0.566  1.00  0.00
ATOM     38  CA  GLN    39      31.742  27.966   3.950  1.00  0.00
ATOM     39  CA  LYS    40      30.223  30.074   6.692  1.00  0.00
ATOM     40  CA  TYR    41      30.995  27.332   9.192  1.00  0.00
ATOM     41  CA  THR    44      32.704  27.831  10.962  1.00  0.00
ATOM     42  CA  SER    45      34.175  27.566  11.261  1.00  0.00
ATOM     43  CA  GLY    46      36.270  24.415  11.534  1.00  0.00
ATOM     44  CA  GLY    47      36.899  22.906  14.961  1.00  0.00
ATOM     45  CA  PRO    48      40.535  23.579  15.833  1.00  0.00
ATOM     46  CA  THR    49      40.546  21.985  19.242  1.00  0.00
ATOM     47  CA  ASP    50      40.650  18.290  20.046  1.00  0.00
ATOM     48  CA  TRP    51      39.623  16.790  23.381  1.00  0.00
ATOM     49  CA  GLN    52      36.230  18.334  23.987  1.00  0.00
ATOM     50  CA  ASP    53      33.402  17.948  26.455  1.00  0.00
ATOM     51  CA  THR    54      30.246  16.172  25.322  1.00  0.00
ATOM     52  CA  LYS    55      27.887  19.041  26.168  1.00  0.00
ATOM     53  CA  ARG    56      30.333  21.452  24.557  1.00  0.00
ATOM     54  CA  ILE    57      30.443  19.398  21.332  1.00  0.00
ATOM     55  CA  PHE    58      26.675  18.925  21.148  1.00  0.00
ATOM     56  CA  GLY    59      26.066  22.639  21.782  1.00  0.00
ATOM     57  CA  GLY    60      28.342  23.417  18.852  1.00  0.00
ATOM     58  CA  ILE    61      26.688  21.012  16.430  1.00  0.00
ATOM     59  CA  LEU    62      23.295  22.357  17.521  1.00  0.00
ATOM     60  CA  ASP    63      24.574  25.830  16.684  1.00  0.00
ATOM     61  CA  LEU    64      25.826  24.737  13.259  1.00  0.00
ATOM     62  CA  PHE    65      22.579  22.865  12.587  1.00  0.00
ATOM     63  CA  GLU    66      20.647  26.045  13.402  1.00  0.00
ATOM     64  CA  GLU    67      22.925  28.077  11.139  1.00  0.00
ATOM     65  CA  GLY    68      22.325  25.567   8.336  1.00  0.00
ATOM     66  CA  ALA    69      18.606  25.645   9.056  1.00  0.00
ATOM     67  CA  ALA    70      18.285  29.404   8.544  1.00  0.00
ATOM     68  CA  GLU    71      20.509  29.190   5.466  1.00  0.00
ATOM     69  CA  GLY    72      18.461  26.340   3.992  1.00  0.00
ATOM     70  CA  LYS    73      15.198  28.140   4.737  1.00  0.00
ATOM     71  CA  LYS    74      16.318  31.061   2.579  1.00  0.00
ATOM     72  CA  VAL    75      16.880  28.645  -0.286  1.00  0.00
ATOM     73  CA  THR    76      13.500  27.001   0.353  1.00  0.00
ATOM     74  CA  ASP    77      11.867  30.416   0.058  1.00  0.00
ATOM     75  CA  LEU    78      13.733  31.228  -3.150  1.00  0.00
ATOM     76  CA  THR    79      12.842  27.889  -4.722  1.00  0.00
ATOM     77  CA  GLY    80       9.230  28.191  -3.596  1.00  0.00
ATOM     78  CA  GLU    81       8.766  31.683  -5.009  1.00  0.00
ATOM     79  CA  ASP    82      11.610  25.329  -8.405  1.00  0.00
ATOM     80  CA  VAL    83      14.796  22.082  -5.130  1.00  0.00
ATOM     81  CA  ALA    84      12.053  23.127  -2.732  1.00  0.00
ATOM     82  CA  ALA    85      11.312  19.516  -1.851  1.00  0.00
ATOM     83  CA  PHE    86      14.966  18.615  -1.528  1.00  0.00
ATOM     84  CA  CYS    87      15.750  21.438   0.879  1.00  0.00
ATOM     85  CA  ASP    88      12.528  20.960   2.827  1.00  0.00
ATOM     86  CA  GLU    89      13.347  17.275   3.384  1.00  0.00
ATOM     87  CA  LEU    90      16.724  18.305   4.787  1.00  0.00
ATOM     88  CA  MET    91      15.070  21.052   6.803  1.00  0.00
ATOM     89  CA  LYS    92      12.818  18.403   8.354  1.00  0.00
ATOM     90  CA  ASP    93      15.681  16.224   9.567  1.00  0.00
ATOM     91  CA  THR    94      17.544  19.310  10.824  1.00  0.00
ATOM     92  CA  LYS    95      14.510  20.422  12.780  1.00  0.00
ATOM     93  CA  THR    96      14.209  17.083  14.498  1.00  0.00
ATOM     94  CA  TRP    97      17.934  16.970  15.346  1.00  0.00
ATOM     95  CA  MET    98      17.941  20.572  16.604  1.00  0.00
ATOM     96  CA  ASP    99      14.977  19.794  18.847  1.00  0.00
ATOM     97  CA  LYS   100      16.559  16.624  20.232  1.00  0.00
ATOM     98  CA  TYR   101      19.892  18.351  20.868  1.00  0.00
ATOM     99  CA  ARG   102      18.029  21.143  22.624  1.00  0.00
ATOM    100  CA  THR   103      16.266  18.586  24.802  1.00  0.00
ATOM    101  CA  LYS   104      19.473  16.784  25.755  1.00  0.00
ATOM    102  CA  LEU   105      21.309  20.058  26.476  1.00  0.00
ATOM    103  CA  ASN   106      18.476  21.372  28.717  1.00  0.00
ATOM    104  CA  ASP   107      16.707  20.418  30.924  1.00  0.00
ATOM    105  CA  SER   108      19.559  19.267  33.192  1.00  0.00
ATOM    106  CA  ILE   109      13.711  23.657  24.623  1.00  0.00
ATOM    107  CA  GLY   110      14.457  23.531  20.861  1.00  0.00
ATOM    108  CA  ARG   111      14.270  27.327  20.602  1.00  0.00
TER
END
