
PFRMAT AL
TARGET T0127
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1BF5_A
REMARK DATE	1998-08-12
REMARK SCORE	?
E 198 D 143
G 199 S 144
D 200 K 145
L 201 V 146
R 202 R 147
P 203 N 148
Q 204 V 149
L 205 K 150
L 206 D 151
D 207 K 152
R 208 V 153
F 209 M 154
G 210 C 155
L 211 I 156
S 212 E 157
V 213 H 158
E 214 E 159
V 215 I 160
L 216 K 161
S 217 S 162
P 218 L 163
R 219 E 164
D 220 D 165
V 221 D 168
E 222 E 169
T 223 Y 170
R 224 D 171
V 225 F 172
E 226 K 173
V 227 C 174
I 228 K 175
R 229 T 176
R 230 L 177
R 231 Q 178
D 232 N 179
T 233 R 180
Y 234 E 181
D 235 H 182
A 236 L 197
D 237 L 198
P 238 L 199
K 239 K 200
A 240 K 201
F 241 M 202
L 242 Y 203
E 243 L 204
E 244 M 205
W 245 L 206
R 246 D 207
P 247 N 208
K 248 K 209
D 249 R 210
M 250 K 211
D 251 E 212
I 252 V 213
R 253 V 214
N 254 H 215
Q 255 K 216
I 256 I 217
L 257 I 218
E 258 E 219
A 259 L 220
R 260 L 221
E 261 N 222
R 262 V 223
L 263 T 224
P 264 E 225
K 265 L 226
V 266 T 227
E 267 A 230
A 268 L 231
P 269 I 232
N 270 N 233
T 271 D 234
A 272 E 235
L 273 L 236
Y 274 V 237
D 275 E 238
C 276 W 239
A 277 K 240
A 278 R 241
L 279 R 242
C 280 Q 243
I 281 Q 244
A 282 S 245
L 283 A 246
G 284 C 247
S 285 I 248
D 286 G 249
G 287 G 250
L 288 P 251
R 289 P 252
G 290 N 253
E 291 A 254
L 292 C 255
T 293 L 256
L 294 D 257
L 295 Q 258
R 296 L 259
S 297 Q 260
A 298 N 261
R 299 W 262
A 300 F 263
L 301 T 264
A 302 I 265
A 303 V 266
L 304 A 267
E 305 E 268
G 306 S 269
A 307 L 270
T 308 Q 271
A 309 Q 272
V 310 V 273
G 311 R 274
R 312 Q 275
D 313 Q 276
H 314 L 277
L 315 K 278
K 316 K 279
R 317 L 280
V 318 E 281
A 319 E 282
T 320 L 283
M 321 E 284
A 322 Q 285
L 323 K 286
S 324 Y 287
H 325 T 288
R 326 Y 289
L 327 E 290
R 328 H 291
R 329 D 292
D 330 P 293
P 331 I 294
L 332 T 295
D 333 K 296
E 334 N 297
A 335 K 298
G 336 Q 299
S 337 V 300
T 338 D 303
A 339 R 304
R 340 T 305
V 341 F 306
A 342 S 307
R 343 L 308
T 344 F 309
V 345 Q 310
E 346 Q 311
E 347 L 312
T 348 I 313
TER
END

