
PFRMAT AL
TARGET T0127
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1a5t
R   18 M 1
P   19 R 2
V   20 W 3
F   21 Y 4
P   22 P 5
F   23 W 6
G   28 L 7
Q   29 R 8
E   30 P 9
D   31 D 10
M   32 F 11
K   33 E 12
L   34 K 13
A   35 L 14
L   36 V 15
L   37 A 16
L   38 S 17
T   39 Y 18
A   40 Q 19
V   41 A 20
D   42 G 21
P   43 R 22
G   44 G 23
I   45 H 24
G   46 H 25
G   47 A 26
V   48 L 27
L   49 L 28
V   50 I 29
F   51 Q 30
G   52 A 31
D   53 L 32
R   54 P 33
G   55 G 34
T   56 M 35
G   57 G 36
K   58 D 37
S   59 D 38
T   60 A 39
A   61 L 40
V   62 I 41
R   63 Y 42
A   64 A 43
L   65 L 44
A   66 S 45
A   67 R 46
L   68 Y 47
L   69 L 48
S   81 L 49
S   82 C 50
P   83 Q 51
N   84 Q 52
V   85 P 53
E   86 Q 54
M   87 G 55
I   88 H 56
P   89 K 57
D   90 S 58
W   91 C 59
A   92 G 60
T   93 H 61
V   94 C 62
L   95 R 63
S   96 G 64
T   97 C 65
N   98 Q 66
V   99 L 67
I  100 M 68
R  101 Q 69
K  102 A 70
P  103 G 71
T  104 T 72
P  105 H 73
V  106 P 74
V  107 D 75
D  108 Y 76
L  109 Y 77
P  110 T 78
L  111 L 79
G  112 A 80
V  113 P 81
S  114 E 82
E  115 K 83
D  116 G 84
R  117 K 85
V  118 N 86
V  119 T 87
G  120 L 88
A  121 G 89
L  122 V 90
D  123 D 91
I  124 A 92
E  125 V 93
R  126 R 94
A  127 E 95
I  128 V 96
S  129 T 97
K  130 E 98
G  131 K 99
E  132 E 102
K  133 H 103
A  134 A 104
F  135 R 105
E  136 L 106
P  137 G 107
G  138 G 108
L  139 A 109
L  140 K 110
A  141 V 111
L  148 V 112
Y  149 W 113
I  150 V 114
D  151 T 115
E  152 D 116
C  153 A 117
N  154 A 118
L  155 L 119
L  156 L 120
E  157 T 121
D  158 D 122
H  159 A 123
I  160 A 124
V  161 A 125
D  162 N 126
L  163 A 127
L  164 L 128
L  165 L 129
D  166 K 130
V  167 T 131
A  168 L 132
Q  169 E 133
S  170 E 134
H  184 P 135
P  185 P 136
A  186 A 137
R  187 E 138
F  188 T 139
V  189 W 140
L  190 F 141
V  191 F 142
G  192 L 143
S  193 A 144
G  194 T 145
P  196 R 146
E  197 E 147
E  198 P 148
G  199 E 149
D  200 R 150
L  201 L 151
R  202 L 152
P  203 A 153
Q  204 T 154
L  205 L 155
L  206 R 156
D  207 S 157
R  208 R 158
F  209 C 159
G  210 R 160
L  211 L 161
S  212 H 162
V  213 Y 163
V  215 L 164
L  216 A 165
S  217 P 166
P  218 P 167
R  219 P 168
D  220 E 169
V  221 Q 170
E  222 Y 171
T  223 A 172
R  224 V 173
V  225 T 174
E  226 W 175
V  227 L 176
I  228 S 177
R  229 R 178
R  230 E 179
R  231 V 180
D  232 T 181
T  233 M 182
Y  234 S 183
D  235 Q 184
A  236 D 185
D  237 A 186
P  238 L 187
K  239 L 188
A  240 A 189
F  241 A 190
L  242 L 191
E  243 R 192
E  244 L 193
W  245 S 194
R  246 A 195
P  247 G 196
K  248 S 197
D  249 P 198
M  250 G 199
D  251 A 200
I  252 A 201
R  253 L 202
N  254 A 203
Q  255 L 204
I  256 F 205
L  257 W 210
E  258 Q 211
A  259 A 212
R  260 R 213
E  261 E 214
R  262 T 215
L  263 L 216
P  264 C 217
K  265 Q 218
V  266 A 219
L  273 L 220
Y  274 A 221
D  275 Y 222
C  276 S 223
A  277 V 224
A  278 S 231
L  279 L 232
C  280 L 233
I  281 A 234
A  282 A 235
L  283 L 236
G  284 N 237
S  285 H 238
D  286 E 239
G  287 Q 240
L  288 A 241
R  289 P 242
G  290 A 243
E  291 R 244
L  292 L 245
T  293 H 246
L  294 W 247
L  295 L 248
A  298 A 249
R  299 T 250
A  300 L 251
L  301 L 252
A  302 M 253
A  303 D 254
L  304 L 256
E  305 K 257
G  306 R 258
A  307 V 265
T  308 T 266
A  309 N 267
V  310 V 268
G  311 S 282
R  312 P 283
D  313 S 284
H  314 R 285
L  315 L 286
K  316 Q 287
R  317 A 288
V  318 I 289
A  319 L 290
T  320 G 291
M  321 D 292
A  322 V 293
L  323 C 294
S  324 H 295
H  325 I 296
R  326 R 297
L  327 E 298
R  328 Q 299
R  329 L 300
D  330 M 301
P  331 S 302
L  332 V 303
D  333 T 304
E  334 G 305
A  335 I 306
G  336 N 307
S  337 R 308
T  338 E 309
A  339 L 310
R  340 L 311
V  341 I 312
A  342 T 313
R  343 D 314
T  344 L 315
V  345 L 316
E  346 L 317
E  347 R 318
T  348 I 319
L  349 L 329
P  350 P 330
TER
END

