
PFRMAT AL
TARGET T0127
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=7.13 
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1qhxa
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1qhx_A
M   1     M     1
T   2     T     2
T   3     T     3
A   4     R     4
G  47     M     5
V  48     I     6
L  49     I     7
V  50     L     8
F  51     N     9
G  52     G    10
D  53     G    11
R  54     S    12
G  55     S    13
T  56     A    14
G  57     G    15
K  58     K    16
S  59     S    17
T  60     G    18
A  61     I    19
V  62     V    20
R  63     R    21
A  64     C    22
L  65     L    23
A  66     Q    24
A  67     S    25
L  68     V    26
L  69     L    27
P  70     P    28
E  71     E    29
D  90     P    30
W  91     W    31
A  92     L    32
T  93     A    33
V  94     F    34
L  95     G    35
S  96     V    36
T  97     D    37
N  98     S    38
V  99     L    39
I 100     I    40
R 101     E    41
K 102     A    42
P 103     M    43
T 104     P    44
P 105     L    45
V 106     K    46
V 107     M    47
D 108     Q    48
L 109     S    49
P 110     A    50
L 111     E    51
G 112     G    52
V 113     G    53
S 114     I    54
E 115     E    55
D 116     F    56
R 117     D    57
V 118     A    58
V 119     D    59
G 120     G    60
A 121     G    61
L 122     V    62
D 123     S    63
I 124     I    64
E 125     G    65
R 126     P    66
A 127     E    67
I 128     F    68
S 129     R    69
K 130     A    70
G 131     L    71
E 132     E    72
K 133     G    73
A 134     A    74
F 135     W    75
E 136     A    76
P 137     E    77
G 138     G    78
L 139     V    79
L 140     V    80
A 141     A    81
R 142     M    82
A 143     A    83
N 144     R    84
R 145     A    85
G 146     G    86
Y 147     R    88
L 148     I    89
Y 149     I    90
I 150     I    91
D 151     D    92
E 152     D    93
C 153     V    94
N 154     F    95
L 155     L    96
L 156     G    97
E 157     G    98
D 158     A    99
H 159     A   100
I 160     A   101
V 161     Q   102
D 162     E   103
L 163     R   104
L 164     W   105
L 165     R   106
D 166     S   107
V 167     F   108
A 168     V   109
G 171     G   110
E 172     D   111
N 173     L   112
V 174     D   113
V 175     V   114
E 176     L   115
R 177     W   116
D 178     V   117
G 179     G   118
L 180     V   119
S 181     R   120
I 182     C   121
R 183     D   122
N 254     G   123
Q 255     A   124
I 256     V   125
L 257     A   126
E 258     E   127
A 259     G   128
R 260     R   129
E 261     E   130
R 262     T   131
L 263     A   132
P 264     R   133
K 265     G   134
V 266     D   135
E 267     R   136
A 268     V   137
P 269     A   138
N 270     G   139
T 271     M   140
A 272     A   141
L 273     A   142
Y 274     K   143
D 275     Q   144
C 276     A   145
A 277     Y   146
A 278     V   147
L 279     V   148
C 280     H   149
I 281     E   150
A 282     G   151
L 283     V   152
G 284     E   153
S 285     Y   154
D 286     D   155
R 328     V   156
R 329     E   157
D 330     V   158
P 331     D   159
L 332     T   160
D 333     T   161
E 334     H   162
A 335     K   163
G 336     E   164
S 337     S   165
T 338     I   166
A 339     E   167
R 340     C   168
V 341     A   169
A 342     W   170
R 343     A   171
T 344     I   172
V 345     A   173
E 346     A   174
E 347     H   175
T 348     V   176
L 349     V   177
P 350     P   178
TER
END

