
PFRMAT AL
TARGET T0125
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 2occ_R
N 20 E 9
F 21 E 10
L 22 F 11
D 23 D 12
E 24 A 13
E 25 R 14
M 26 W 15
H 27 V 16
K 28 T 17
L 29 Y 18
V 30 F 19
K 31 N 20
R 32 K 21
F 33 P 22
R 34 D 23
D 35 I 24
M 36 D 25
R 37 A 26
W 38 W 27
N 39 E 28
L 40 L 29
R 53 R 30
E 54 K 31
R 55 G 32
M 56 M 33
M 57 N 34
R 58 T 35
Y 59 L 36
C 60 V 37
M 61 G 38
D 62 Y 39
Y 63 D 40
A 64 L 41
R 65 V 42
Y 66 P 43
S 67 E 44
K 68 P 45
K 69 K 46
I 70 I 47
L 71 I 48
Q 72 D 49
L 73 A 50
K 74 A 51
H 75 L 52
L 76 R 53
P 77 A 54
K 80 L 58
K 81 N 59
T 82 D 60
L 83 F 61
T 84 A 62
K 85 S 63
M 86 A 64
G 87 V 65
R 88 R 66
F 89 I 67
G 96 L 68
V 97 E 69
I 98 V 70
R 99 V 71
E 100 K 72
L 101 D 73
Y 102 K 74
A 103 A 75
D 104 G 76
V 105 P 77
F 106 H 78
R 107 K 79
D 108 E 80
V 109 I 81
Q 110 Y 82
G 111 P 83
F 112 Y 84
R 113 V 85
G 114 I 86
P 115 Q 87
K 116 E 88
M 117 L 89
T 118 R 90
A 119 P 91
A 120 T 92
M 121 L 93
R 122 N 94
K 123 E 95
Y 124 L 96
S 125 G 97
S 126 I 98
K 127 S 99
D 128 T 100
P 129 P 101
G 130 E 102
T 131 E 103
F 132 L 104
TER
END

