
PFRMAT AL
TARGET T0125
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  5
PARENT 1afs_B
D 35 G 181
M 36 L 182
R 37 K 183
W 38 Y 184
N 39 K 185
L 40 P 186
G 41 V 187
P 42 C 188
G 43 N 189
F 44 Q 190
V 45 V 191
F 46 E 192
L 47 C 193
L 48 H 194
K 49 L 195
K 50 Y 196
V 51 L 197
N 52 N 198
R 53 Q 199
E 54 S 200
R 55 K 201
M 56 M 202
M 57 L 203
R 58 D 204
Y 59 Y 205
C 60 C 206
M 61 K 207
S 67 S 208
K 68 K 209
K 69 D 210
I 70 I 211
L 71 I 212
Q 72 L 213
L 73 V 214
K 74 S 215
H 75 Y 216
L 76 C 217
P 77 T 218
V 78 L 219
TER
END

