
PFRMAT AL
TARGET T0125
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.27 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1pprm1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1ppr_M
F   1     I     3
D   2     G     4
D   3     D     5
V   4     A     6
V   5     A     7
V   6     K     8
S   7     K     9
R   8     L    10
Q   9     G    11
E  10     D    12
Q  11     A    13
S  12     S    14
Y  13     Y    15
V  14     A    16
Q  15     F    17
R  16     A    18
G  17     K    19
M  18     E    20
V  19     V    21
N  20     D    22
F  21     W    23
L  22     N    24
D  23     N    25
E  24     G    26
E  25     I    27
M  26     F    28
H  27     L    29
K  28     Q    30
L  29     A    31
V  30     P    32
K  31     G    33
R  32     K    34
F  33     L    35
R  34     Q    36
D  35     P    37
M  36     L    38
R  37     E    39
W  38     A    40
N  39     L    41
L  40     K    42
G  41     A    43
P  42     I    44
G  43     D    45
F  44     K    46
V  45     M    47
F  46     I    48
L  47     V    49
L  48     M    50
K  49     G    51
K  50     A    52
V  51     A    53
N  52     A    54
R  53     D    55
E  54     P    56
R  55     K    57
M  56     L    58
M  57     L    59
R  58     K    60
Y  59     A    61
C  60     A    62
M  61     A    63
D  62     E    64
Y  63     A    65
A  64     H    66
R  65     H    67
Y  66     K    68
S  67     A    69
K  68     I    70
K  69     G    71
I  70     S    72
L  71     I    73
Q  72     S    74
L  73     G    75
K  74     P    76
H  75     N    77
L  76     G    78
P  77     V    79
V  78     T    80
N  79     S    81
K  80     R    82
K  81     A    83
T  82     D    84
L  83     W    85
T  84     D    86
K  85     N    87
M  86     V    88
G  87     N    89
R  88     A    90
F  89     A    91
V  90     L    92
G  91     G    93
Y  92     R    94
R  93     V    95
N  94     I    96
Y  95     A    97
G  96     S    98
V  97     V    99
I  98     P   100
R  99     E   101
E 100     N   102
L 101     M   103
Y 102     V   104
A 103     M   105
D 104     D   106
V 105     V   107
F 106     Y   108
R 107     D   109
D 108     S   110
V 109     V   111
Q 110     S   112
G 111     K   113
F 112     I   114
R 113     T   115
G 114     D   116
P 115     P   117
K 116     K   118
M 117     V   119
T 118     P   120
A 119     A   121
A 120     Y   122
M 121     M   123
R 122     K   124
K 123     S   125
Y 124     L   126
S 125     V   127
S 126     N   128
K 127     G   129
D 128     A   130
P 129     D   131
G 130     A   132
T 131     E   133
F 132     K   134
P 133     A   135
C 134     Y   136
K 135     E   137
N 136     G   138
E 137     F   139
K 138     L   140
R 139     A   141
R 140     F   142
G 141     K   143
TER
END

