
PFRMAT AL
TARGET T0123
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 1QQS_A
REMARK DATE	2000-04-21
REMARK SCORE	?
V 1 L 13
E 2 S 14
V 3 K 15
T 4 V 16
P 5 P 17
I 6 L 18
M 7 Q 19
T 8 Q 20
E 9 N 21
L 10 F 22
D 11 Q 23
T 12 D 24
Q 13 N 25
K 14 Q 26
V 15 F 27
A 16 Q 28
G 17 G 29
T 18 K 30
W 19 W 31
H 20 Y 32
T 21 V 33
V 22 V 34
A 23 G 35
M 24 L 36
A 25 A 37
V 26 G 38
S 27 N 39
D 28 A 40
V 29 I 41
S 30 L 42
L 31 R 43
L 32 E 44
D 33 D 45
A 34 K 46
K 35 D 47
S 36 P 48
S 37 Q 49
P 38 K 50
L 39 M 51
K 40 Y 52
A 41 A 53
Y 42 T 54
V 43 I 55
E 44 Y 56
G 45 E 57
L 46 E 58
K 47 K 59
P 48 E 60
T 49 D 61
P 50 A 62
E 51 S 63
G 52 Y 64
D 53 N 65
L 54 V 66
E 55 T 67
I 56 S 68
L 57 V 69
L 58 L 70
Q 59 F 71
K 60 R 72
R 61 K 73
E 62 K 74
N 63 K 75
D 64 C 76
K 65 D 77
C 66 Y 78
A 67 A 79
Q 68 I 80
E 69 R 81
V 70 T 82
L 71 F 83
L 72 V 84
A 73 P 85
K 74 G 86
K 75 C 87
T 76 Q 88
D 77 P 89
TER
END

