
PFRMAT AL
TARGET T0123
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.68 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1avgi
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1avg_I
P   5     A     1 
I   6     E     2 
M   7     G     3 
T   8     D     4 
E   9     D     5 
L  10     C     6 
D  11     S     7 
T  12     I     8 
Q  13     E     9 
K  14     K    10 
V  15     A    11 
A  16     M    12 
G  17     G    13 
T  18     D    14 
W  19     F    15 
H  20     K    16 
T  21     P    17 
V  22     E    18 
A  23     E    19 
M  24     F    20 
A  25     F    21 
V  26     N    22 
S  27     G    23 
D  28     T    24 
V  29     W    25 
S  30     Y    26 
L  31     L    27 
L  32     A    28 
D  33     H    29 
A  34     G    30 
K  35     P    31 
S  36     G    32 
S  37     V    33 
P  38     T    34 
L  39     S    35 
K  40     P    36 
A  41     A    37 
Y  42     V    38 
V  43     C    39 
E  44     Q    40 
G  45     K    41 
L  46     F    42 
K  47     T    43 
P  48     T    44 
T  49     S    45 
P  50     G    46 
E  51     S    47 
G  52     K    48 
D  53     G    49 
L  54     V    54 
E  55     E    55 
I  56     I    56 
L  57     G    57 
L  58     Y    58 
Q  59     N    59 
K  60     K    60 
R  61     F    61 
E  62     E    62 
N  63     S    63 
D  64     N    64 
K  65     V    65 
C  66     K    66 
A  67     F    67 
Q  68     Q    68 
E  69     C    69 
V  70     N    70 
L  71     Q    71 
L  72     V    72 
A  73     D    73 
K  74     N    74 
K  75     K    75 
T  76     N    76 
D  77     G    77 
I  78     E    78 
P  79     Q    79 
A  80     Y    80 
V  81     S    81 
F  82     F    82 
K  83     K    83 
I  84     C    84 
N  85     K    85 
A  86     S    86 
L  87     S    87 
D  88     D    88 
E  89     E    93 
N  90     A    94 
Q  91     D    95 
L  92     F    96 
F  93     T    97 
L  94     F    98 
L  95     I    99 
D  96     S   100 
T  97     V   101 
D  98     S   102 
Y  99     Y   103 
D 100     D   104 
S 101     N   105 
H 102     F   106 
L 103     A   107 
L 104     L   108 
L 105     V   109 
C 106     C   110 
M 107     R   111 
E 108     S   112 
N 109     I   113 
S 110     T   114 
A 111     F   115 
S 112     T   116 
P 113     S   117 
E 114     Q   118 
H 115     P   119 
S 116     K   120 
L 117     E   121 
V 118     D   122 
C 119     R   123 
Q 120     Y   124 
S 121     L   125 
L 122     V   126 
A 123     F   127 
R 124     E   128 
T 125     R   129 
L 126     T   130 
E 127     K   131 
V 128     S   132 
D 129     D   133 
D 130     T   134 
Q 131     D   135 
A 152     P   136 
Q 153     D   137 
L 154     A   138 
E 155     K   139 
E 156     E   140 
Q 157     I   141 
C 158     C   142 
TER
END

