
PFRMAT AL
TARGET T0120
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1dg3_A
M    1 I 14
E    2 E 15
R    3 N 16
K    4 T 17
I    5 N 18
S    6 G 19
R    7 R 20
I    8 L 21
H    9 M 22
L   10 A 23
V   11 I 34
S   12 T 35
E   13 Q 36
P   14 P 37
S   15 M 38
I   16 V 39
T   17 V 40
H   18 V 41
F   19 A 42
L   20 I 43
Q   21 V 44
V   22 G 45
S   23 L 46
W   24 Y 47
E   25 R 48
K   26 H 85
T   27 P 86
L   28 K 87
E   29 K 88
S   30 P 89
G   31 G 90
F   32 H 91
V   33 I 92
I   34 L 93
T   35 V 94
L   36 L 95
T   37 L 96
D   38 D 97
G   39 T 98
H   40 E 99
S   41 G 100
A   42 L 101
G   45 G 102
T   46 D 103
V   47 V 104
S   48 E 105
E   49 K 106
S   50 G 107
E   51 D 108
I   52 N 109
S   53 Q 110
Q   54 N 111
E   55 D 112
A   56 I 134
D   57 N 135
D   58 Q 136
M   59 Q 137
A   60 A 138
M   61 M 139
E   62 D 140
K   63 Q 141
G   64 L 142
K   65 Y 143
Y   66 Y 144
V   67 V 145
G   68 T 146
E   69 E 147
L   70 L 148
R   71 T 149
K   72 H 150
A   73 R 151
L   74 I 152
L   75 R 153
S   76 S 154
G   77 K 155
A   78 S 156
G   79 D 167
P   80 S 168
A   81 A 169
D   82 D 170
V   83 V 179
Y   84 W 180
T   85 T 181
F   86 F 219
N   87 N 220
F   88 F 230
S   89 P 231
K   90 K 232
E   91 K 233
S   92 K 234
C   93 C 235
Y   94 F 236
F   95 P 260
F   96 E 261
F   97 F 262
E   98 V 263
K   99 Q 264
N  100 Q 265
L  101 V 266
K  102 A 267
D  103 D 268
V  104 F 269
S  105 S 271
F  106 Y 272
R  107 I 273
L  108 F 274
G  109 S 275
S  110 N 276
F  111 S 277
N  112 K 278
L  113 T 279
E  114 K 280
K  115 T 281
V  116 L 282
E  117 S 283
N  118 G 284
P  119 G 285
A  120 I 286
E  121 Q 287
V  122 V 288
I  123 M 312
R  124 E 313
E  125 N 314
L  126 A 315
I  127 V 316
C  128 L 317
Y  129 A 318
C  130 L 319
L  131 A 320
D  132 Q 321
T  133 I 322
I  134 E 323
A  135 N 324
E  136 S 325
N  137 A 326
Q  138 Q 329
A  139 K 330
K  140 A 331
N  141 I 332
E  142 A 333
H  143 H 334
L  144 Y 335
Q  145 E 336
K  146 Q 337
E  147 Q 338
N  148 M 339
E  149 Q 351
R  150 E 352
L  151 L 353
L  152 L 354
R  153 D 355
D  154 L 356
W  155 H 357
N  156 R 358
D  157 D 359
V  158 S 360
Q  159 E 361
G  160 R 362
R  161 E 363
F  162 A 364
E  163 I 365
K  164 E 366
C  165 V 367
V  166 L 379
S  167 F 380
A  168 Q 381
K  169 K 382
E  170 E 383
L  172 L 384
E  173 A 385
T  174 A 386
D  175 Q 387
L  176 L 388
Y  177 E 389
K  178 K 390
R  179 K 391
F  180 R 392
I  181 D 393
L  182 D 394
V  183 F 395
L  184 C 396
N  185 K 397
E  186 Q 398
K  187 N 399
K  188 Q 400
T  189 E 401
K  190 E 421
I  191 V 422
R  192 K 423
S  193 K 439
L  194 L 440
H  195 Q 441
N  196 D 442
K  197 L 443
L  198 K 444
L  199 K 445
N  200 K 446
A  201 Y 447
A  202 Y 448
Q  203 E 449
E  204 E 450
R  205 P 451
E  206 R 452
K  207 K 453
D  208 G 454
I  209 I 455
K  210 Q 456
Q  211 A 457
E  212 E 458
G  213 E 459
E  214 I 460
T  215 L 461
A  216 Q 462
I  217 T 463
C  218 Y 464
S  219 L 465
E  220 K 466
M  221 S 467
T  222 K 468
A  223 E 469
D  224 S 470
R  225 T 472
D  226 D 473
P  227 A 474
V  228 I 475
Y  229 L 476
D  230 Q 477
E  231 D 479
S  232 Q 480
T  233 T 481
D  234 L 482
E  235 T 483
E  236 E 484
S  237 K 485
E  238 E 486
N  239 K 487
Q  240 E 488
T  241 I 489
D  242 E 490
L  243 V 491
S  244 E 492
G  245 R 493
L  246 V 494
A  247 K 495
S  248 A 496
A  249 E 497
A  250 S 498
V  251 A 499
S  252 Q 500
K  253 A 501
D  254 S 502
D  255 A 503
S  256 K 504
I  257 M 505
I  258 L 506
S  259 H 507
S  260 E 508
L  261 M 509
D  262 Q 510
V  263 R 511
T  264 K 512
D  265 N 513
I  266 E 514
A  267 Q 515
P  268 M 517
S  269 E 518
R  270 Q 519
K  271 K 520
R  272 E 521
R  273 R 522
Q  274 S 523
R  275 Y 524
M  276 Q 525
Q  277 E 526
R  278 H 527
N  279 L 528
L  280 K 529
G  281 Q 530
T  282 L 531
E  283 T 532
P  284 E 533
K  285 K 534
M  286 M 535
A  287 E 536
P  288 N 537
Q  289 D 538
E  290 R 539
N  291 V 540
Q  292 Q 541
L  293 L 543
Q  294 K 544
E  295 E 545
K  296 Q 546
E  297 E 547
N  298 R 548
S  299 Q 555
R  300 E 556
P  301 Q 557
D  302 E 558
S  303 Q 559
S  304 L 560
L  305 L 561
P  306 K 562
E  307 E 563
T  308 G 564
S  309 F 565
K  310 Q 566
K  311 K 567
E  312 E 568
H  313 S 569
I  314 R 570
S  315 I 571
A  316 M 572
E  317 K 573
N  318 N 574
M  319 E 575
S  320 I 576
L  321 Q 577
E  322 D 578
T  323 L 579
L  324 Q 580
R  325 T 581
N  326 K 582
S  327 M 583
TER
END

