
PFRMAT AL
TARGET T0120
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1av1_A
I   52 M 43
S   53 L 44
Q   54 K 45
E   55 L 46
A   56 L 47
D   57 D 48
D   58 N 49
M   59 W 50
A   60 D 51
M   61 S 52
E   62 V 53
K   63 T 54
G   64 S 55
Y   66 T 56
V   67 F 57
G   68 S 58
E   69 K 59
L   70 L 60
R   71 R 61
K   72 E 62
A   73 Q 63
L   74 L 64
G   79 G 65
P   80 P 66
C   93 V 67
Y   94 T 68
F   95 Q 69
F   96 E 70
F   97 F 71
E   98 W 72
K   99 D 73
N  100 N 74
L  101 L 75
K  102 E 76
D  103 K 77
V  104 E 78
S  105 T 79
F  106 E 80
R  107 G 81
L  108 L 82
N  112 R 83
L  113 Q 84
E  114 E 85
K  115 M 86
V  116 S 87
E  117 K 88
N  118 D 89
P  119 L 90
A  120 E 91
E  121 E 92
I  123 V 93
R  124 K 94
E  125 A 95
L  126 K 96
I  127 V 97
C  128 Q 98
Y  129 P 99
C  130 Y 100
L  131 L 101
D  132 D 102
T  133 D 103
I  134 F 104
A  135 Q 105
E  136 K 106
N  137 K 107
Q  138 Q 109
A  139 E 110
K  140 E 111
N  141 M 112
E  142 E 113
H  143 L 114
L  144 Y 115
Q  145 R 116
K  146 Q 117
E  147 K 118
N  148 V 119
E  149 E 120
R  150 P 121
L  151 L 122
L  152 R 123
R  153 A 124
D  154 E 125
W  155 L 126
N  156 Q 127
D  157 E 128
V  158 A 130
Q  159 R 131
G  160 Q 132
R  161 K 133
F  162 L 134
E  163 H 135
K  164 E 136
C  165 L 137
V  166 Q 138
S  167 E 139
A  168 K 140
K  169 L 141
E  170 S 142
A  171 P 143
L  172 L 144
E  173 G 145
T  174 E 146
D  175 E 147
L  176 M 148
Y  177 R 149
K  178 D 150
R  179 R 151
F  180 A 152
I  181 R 153
L  182 A 154
V  183 H 155
L  184 V 156
N  185 D 157
E  186 A 158
K  187 L 159
K  188 R 160
T  189 T 161
K  190 H 162
I  191 L 163
R  192 A 164
S  193 P 165
L  194 Y 166
H  195 S 167
N  196 D 168
K  197 E 169
L  198 L 170
L  199 R 171
N  200 Q 172
A  201 R 173
A  202 L 174
Q  203 A 175
E  204 A 176
R  205 R 177
E  206 L 178
K  207 E 179
D  208 A 180
I  209 L 181
K  210 K 182
Q  211 E 183
E  212 N 184
G  213 G 185
E  214 G 186
T  215 A 187
A  216 R 188
I  217 L 189
C  218 A 190
S  219 E 191
E  220 Y 192
M  221 H 193
T  222 A 194
A  223 K 195
D  224 A 196
R  225 T 197
D  226 E 198
D  242 H 199
L  243 L 200
S  244 S 201
G  245 T 202
L  246 L 203
A  247 S 204
S  248 E 205
A  249 K 206
A  250 A 207
V  251 K 208
S  252 P 209
K  253 A 210
D  254 L 211
D  255 E 212
S  256 D 213
I  257 L 214
I  258 R 215
S  259 Q 216
S  260 G 217
L  261 L 218
D  262 E 223
V  263 S 224
T  264 F 225
D  265 K 226
I  266 V 227
A  267 S 228
P  268 F 229
S  269 L 230
R  270 S 231
K  271 A 232
R  272 L 233
R  273 E 234
Q  274 E 235
R  275 Y 236
M  276 T 237
Q  277 K 238
R  278 K 239
N  279 L 240
L  280 N 241
G  281 T 242
T  282 Q 243
TER
END

