
PFRMAT AL
TARGET T0119
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=10.28
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1cqxa2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1cqx_A
K 105     W   151
I 106     K   152
H 107     G   153
H 108     W   154
F 109     R   155
E 110     T   156
G 111     F   157
T 112     V   158
L 113     I   159
A 114     R   160
R 115     E   161
V 116     K   162
E 117     R   163
N 118     P   164
L 119     E   165
S 120     S   166
D 121     D   167
S 122     V   168
T 123     I   169
I 124     T   170
T 125     S   171
F 126     F   172
D 127     I   173
I 128     L   174
Q 129     E   175
L 130     P   176
D 131     A   177
D 132     D   178
G 133     G   179
Q 134     G   180
P 135     P   181
D 136     V   182
I 137     V   183
H 138     N   184
F 139     F   185
L 140     E   186
A 141     P   187
G 142     G   188
Q 143     Q   189
Y 144     Y   190
V 145     T   191
N 146     S   192
V 147     V   193
T 148     A   194
L 149     I   195
P 150     L   200
G 151     G   201
T 152     L   202
T 153     Q   203
E 154     Q   204
T 155     I   205
R 156     R   206
S 157     Q   207
Y 158     Y   208
S 159     S   209
F 160     L   210
S 161     S   211
S 162     D   212
Q 163     M   213
P 164     P   214
G 165     N   215
N 166     G   216
R 167     R   217
L 168     T   218
T 169     Y   219
G 170     R   220
F 171     I   221
V 172     S   222
V 173     V   223
R 174     K   224
N 175     R   225
V 176     E   226
P 177     P   232
Q 178     P   233
G 179     G   234
K 180     Y   235
M 181     V   236
S 182     S   237
E 183     N   238
Y 184     L   239
L 185     L   240
S 186     H   241
V 187     D   242
Q 188     H   243
A 189     V   244
K 190     N   245
A 191     V   246
G 192     G   247
D 193     D   248
K 194     Q   249
M 195     V   250
S 196     K   251
F 197     L   252
T 198     A   253
G 199     A   254
P 200     P   255
F 201     Y   256
G 202     G   257
S 203     S   258
F 204     F   259
Y 205     H   260
L 206     I   261
TER
END

