
PFRMAT AL
TARGET T0119
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=10.58
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: fer2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1fxa_A
S   2     A     1
N   3     T     2
H   4     F     3
Q   5     K     4
V   6     V     5
A   7     T     6
L   8     L     7
Q   9     I     8
F  10     N     9
E  11     A    11
D  12     E    12
G  13     G    13
V  14     T    14
T  15     K    15
R  16     H    16
F  17     E    17
I  18     I    18
C  19     E    19
I  20     V    20
A  21     P    21
Q  22     D    22
G  23     D    23
E  24     E    24
T  25     Y    25
L  26     I    26
S  27     L    27
D  28     D    28
A  29     A    29
A  30     A    30
Y  31     E    31
R  32     E    32
Q  33     Q    33
Q  34     G    34
I  35     Y    35
N  36     D    36
I  37     L    37
P  38     P    38
M  39     F    39
D  40     S    40
C  41     C    41
R  42     R    42
E  43     A    43
G  44     G    44
E  45     A    45
C  46     C    46
G  47     S    47
T  48     T    48
C  49     C    49
R  50     A    50
A  51     G    51
F  52     K    52
C  53     L    53
E  54     V    54
S  55     S    55
G  56     G    56
N  57     T    57
Y  58     V    58
D  59     D    59
M  60     Q    60
P  61     S    61
E  62     D    62
D  63     Q    63
N  64     S    64
Y  65     F    65
I  66     L    66
E  67     D    67
E  74     D    68
A  75     D    69
Q  76     Q    70
Q  77     I    71
G  78     G    74
Y  79     Y    75
V  80     V    76
L  81     L    77
A  82     T    78
C  83     C    79
Q  84     V    80
C  85     A    81
R  86     Y    82
P  87     P    83
T  88     T    84
A  91     V    87
V  92     V    88
F  93     I    89
Q  94     Q    90
I  95     T    91
Q  96     H    92
A  97     K    93
S  98     E    94
S  99     E    95
E 100     D    96
V 101     L    97
C 102     Y    98
TER
END

