
PFRMAT AL
TARGET T0119
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=13.13
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd2pia_2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 2pia
S 203     E   104
F 204     F   105
Y 205     P   106
L 206     L   107
R 207     D   108
D 208     K   109
V 209     R   110
K 210     A   111
R 211     K   112
P 212     S   113
V 213     F   114
L 214     I   115
M 215     L   116
L 216     V   117
A 217     A   118
G 218     G   119
G 219     G   120
T 220     I   121
G 221     G   122
I 222     I   123
A 223     T   124
P 224     P   125
F 225     M   126
L 226     L   127
S 227     S   128
M 228     M   129
L 229     A   130
Q 230     R   131
V 231     Q   132
L 232     L   133
E 233     R   134
Q 234     A   135
K 235     E   136
G 236     G   137
E 238     L   138
H 239     R   139
P 240     S   140
V 241     F   141
R 242     R   142
L 243     L   143
V 244     Y   144
F 245     Y   145
G 246     L   146
V 247     T   147
T 248     R   148
Q 249     D   149
D 250     P   150
C 251     E   151
D 252     G   152
L 253     T   153
V 254     A   154
A 255     F   155
L 256     F   156
E 257     D   157
Q 258     E   158
L 259     L   159
D 260     T   160
A 261     S   161
P 267     D   162
W 268     E   163
F 269     W   164
E 270     R   165
Y 271     S   166
R 272     D   167
T 273     V   168
V 274     K   169
V 275     I   170
A 276     H   171
H 277     H   172
A 278     D   173
E 279     H   174
S 280     G   175
Q 281     D   176
H 282     P   177
E 283     T   178
R 284     K   179
K 285     A   180
G 286     F   181
Y 287     D   182
V 288     F   183
T 289     W   184
G 290     S   185
H 291     V   186
I 292     F   187
E 293     E   188
Y 294     K   189
N 298     S   190
G 299     K   191
G 300     P   192
E 301     A   193
V 302     Q   194
D 303     H   195
V 304     V   196
Y 305     Y   197
L 306     C   198
C 307     C   199
G 308     G   200
P 309     P   201
V 310     Q   202
P 311     A   203
M 312     L   204
V 313     M   205
E 314     D   206
A 315     T   207
V 316     V   208
R 317     R   209
S 318     D   210
W 319     M   211
L 320     T   212
D 321     G   213
T 322     H   214
I 325     W   215
Q 326     P   216
P 327     S   217
A 328     G   218
N 329     T   219
F 330     V   220
L 331     H   221
F 332     F   222
E 333     E   223
TER
END

