
PFRMAT AL
TARGET T0117
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 3adk
Y 14 E 2
A 15 E 3
E 16 K 4
G 17 L 5
T 18 K 6
Q 19 K 7
P 20 S 8
F 21 K 9
T 22 I 10
V 23 I 11
L 24 F 12
I 25 V 13
E 26 V 14
G 27 G 15
N 28 G 16
I 29 P 17
G 30 G 18
S 31 S 19
G 32 G 20
K 33 K 21
T 34 G 22
T 35 T 23
Y 36 Q 24
L 37 C 25
N 38 E 26
H 39 K 27
F 40 I 28
E 41 V 29
K 42 Q 30
Y 43 K 31
K 44 Y 32
N 45 G 33
D 46 Y 34
I 47 T 35
C 48 H 36
L 49 L 37
L 50 S 38
T 51 T 39
E 52 G 40
P 53 D 41
V 54 L 42
E 55 L 43
K 56 R 44
W 57 A 45
R 58 E 46
N 59 V 47
V 60 S 48
N 61 S 49
G 62 G 50
V 63 S 51
N 64 A 52
L 66 R 53
E 67 G 54
L 68 K 55
M 69 M 56
Y 70 L 57
K 71 S 58
D 72 E 59
P 73 I 60
K 74 M 61
K 75 E 62
W 76 K 63
A 77 G 64
M 78 Q 65
P 79 L 66
F 80 V 67
Q 81 P 68
S 82 L 69
Y 83 E 70
V 84 T 71
T 85 V 72
L 86 L 73
T 87 D 74
M 88 M 75
L 89 L 76
Q 90 R 77
S 91 D 78
H 92 A 79
T 93 M 80
A 94 V 81
P 95 A 82
T 96 K 83
N 97 V 84
K 98 D 85
K 99 T 86
R 120 S 87
N 121 K 88
G 122 G 89
S 123 F 90
L 124 L 91
E 125 I 92
Q 126 D 93
G 127 G 94
M 128 Y 95
Y 129 P 96
N 130 R 97
T 131 E 98
L 132 V 99
E 133 K 100
E 134 Q 101
K 137 G 102
F 138 E 103
I 139 E 104
E 140 F 105
E 141 E 106
S 142 R 107
I 143 K 108
H 144 I 109
V 145 G 110
Q 146 Q 111
A 147 P 112
D 148 T 113
L 149 L 114
I 150 L 115
I 151 L 116
Y 152 Y 117
L 153 V 118
R 154 D 119
T 155 A 120
S 156 G 121
P 157 P 122
E 158 E 123
V 159 T 124
A 160 M 125
Y 161 T 126
E 162 K 127
R 163 R 128
I 164 L 129
R 165 L 130
Q 166 K 131
R 167 R 132
A 168 G 133
R 169 E 134
S 170 T 135
E 171 S 136
E 172 G 137
S 173 R 138
C 174 V 139
V 175 D 140
P 176 D 141
L 177 E 143
K 178 E 144
Y 179 T 145
L 180 I 146
Q 181 K 147
E 182 K 148
L 183 R 149
H 184 L 150
E 185 E 151
L 186 T 152
H 187 Y 153
E 188 Y 154
D 189 K 155
W 190 E 158
L 191 P 159
I 192 V 160
H 193 I 161
Q 194 A 162
R 195 F 163
R 196 Y 164
P 197 E 165
Q 198 K 166
S 199 R 167
C 200 G 168
K 201 I 169
V 202 V 170
L 203 R 171
V 204 K 172
L 205 V 173
D 206 N 174
A 207 A 175
D 208 E 176
L 209 G 177
N 210 S 178
L 211 V 179
E 212 D 180
N 213 D 181
I 214 V 182
G 215 F 183
T 216 S 184
E 217 Q 185
Y 218 V 186
Q 219 C 187
R 220 T 188
S 221 H 189
E 222 L 190
S 223 D 191
S 224 T 192
I 225 L 193
F 226 K 194
TER
END

