
PFRMAT AL
TARGET T0117
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1qf9_A
A   15 M 1
E   16 E 2
G   17 K 3
T   18 S 4
Q   19 K 5
P   20 P 6
F   21 N 7
T   22 V 8
V   23 V 9
L   24 F 10
I   25 V 11
E   26 L 12
G   27 G 13
N   28 G 14
I   29 P 15
G   30 G 16
S   31 S 17
G   32 G 18
K   33 K 19
T   34 G 20
T   35 T 21
Y   36 Q 22
L   37 C 23
N   38 A 24
H   39 N 25
F   40 I 26
E   41 V 27
K   42 R 28
Y   43 D 29
K   44 F 30
N   45 G 31
D   46 W 32
I   47 V 33
C   48 H 34
L   49 L 35
L   50 S 36
N   61 A 37
G   62 G 38
V   63 D 39
N   64 L 40
L   65 L 41
L   66 R 42
E   67 Q 43
L   68 E 44
M   69 Q 45
Y   70 Q 46
K   71 K 50
D   72 D 51
P   73 G 52
K   74 E 53
K   75 M 54
W   76 I 55
A   77 A 56
M   78 T 57
P   79 M 58
F   80 I 59
Q   81 P 66
S   82 S 67
Y   83 I 68
V   84 V 69
T   85 T 70
L   86 V 71
T   87 K 72
M   88 L 73
L   89 L 74
Q   90 K 75
S   91 N 76
H   92 A 77
T   93 I 78
A   94 D 79
P   95 A 80
T   96 N 81
N   97 Q 82
K   98 G 83
K   99 K 84
L  100 N 85
K  101 F 86
I  102 L 87
M  103 V 88
E  104 D 89
G  122 G 90
S  123 F 91
L  124 P 92
E  125 R 93
Q  126 N 94
G  127 E 95
M  128 E 96
Y  129 N 97
N  130 N 98
T  131 N 99
E  134 S 100
W  135 W 101
Y  136 E 102
K  137 E 103
F  138 N 104
I  139 M 105
E  140 K 106
E  141 D 107
S  142 F 108
I  143 V 109
H  144 D 110
V  145 T 111
Q  146 K 112
L  149 F 113
I  150 V 114
I  151 L 115
Y  152 F 116
L  153 F 117
R  154 D 118
T  155 C 119
S  156 P 120
P  157 E 121
E  158 E 122
V  159 V 123
A  160 M 124
Y  161 T 125
E  162 Q 126
R  163 R 127
I  164 L 128
R  165 L 129
Q  166 K 130
R  167 R 131
A  168 G 132
R  169 E 133
S  170 S 134
E  171 G 136
E  172 R 137
S  173 S 138
C  174 D 139
V  175 D 140
P  176 N 141
L  177 I 142
K  178 E 143
Y  179 S 144
L  180 I 145
Q  181 K 146
E  182 K 147
L  183 F 152
H  184 N 153
E  185 V 154
L  186 Q 155
H  187 T 156
E  188 K 157
D  189 L 158
W  190 V 159
L  191 I 160
I  192 D 161
H  193 H 162
Q  194 Y 163
R  195 N 164
R  196 K 165
P  197 F 166
Q  198 D 167
S  199 K 168
V  202 V 169
L  203 K 170
V  204 I 171
L  205 I 172
D  206 P 173
A  207 A 174
D  208 N 175
L  209 R 176
N  210 D 177
L  211 V 178
E  212 N 179
N  213 E 180
I  214 V 181
G  215 Y 182
T  216 N 183
E  217 D 184
Y  218 V 185
Q  219 E 186
R  220 N 187
S  221 L 188
E  222 F 189
S  223 K 190
S  224 S 191
I  225 M 192
F  226 F 194
TER
END

