
PFRMAT AL
TARGET T0117
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=15.31
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1qhia
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1qhi_A
G  17     M    46
T  18     P    47
Q  19     T    48
P  20     L    49
F  21     L    50
T  22     R    51
V  23     V    52
L  24     Y    53
I  25     I    54
E  26     D    55
G  27     G    56
N  28     P    57
I  29     H    58
G  30     G    59
S  31     M    60
G  32     G    61
K  33     K    62
T  34     T    63
T  35     T    64
Y  36     T    65
L  37     T    66
N  38     Q    67
H  39     L    68
F  40     L    69
D  46     D    77
I  47     I    78
C  48     V    79
L  49     Y    80
L  50     V    81
T  51     P    82
E  52     E    83
P  53     P    84
V  54     M    85
E  55     T    86
K  56     Y    87
W  57     W    88
R  58     R    89
N  59     V    90
V  60     L    91
N  61     G    92
G  62     A    93
V  63     S    94
N  64     E    95
L  65     T    96
L  66     I    97
E  67     A    98
L  68     N    99
M  69     I   100
Y  70     Y   101
K  71     T   102
D  72     T   103
P  73     Q   104
K  74     H   105
K  75     R   106
W  76     L   107
A  77     A   117
M  78     A   118
P  79     V   119
F  80     V   120
Q  81     M   121
S  82     T   122
Y  83     S   123
V  84     A   124
T  85     Q   125
L  86     I   126
T  87     T   127
M  88     M   128
L  89     G   129
Q  90     M   130
S  91     P   131
H  92     Y   132
T  93     A   133
A  94     V   134
P  95     T   135
T  96     D   136
N  97     A   137
K  98     V   138
K  99     L   139
L 100     A   140
K 101     P   141
I 102     I   160
M 103     F   161
E 104     D   162
R 105     R   163
S 106     H   164
I 107     P   165
F 108     I   166
S 109     A   167
A 110     A   168
R 111     L   169
Y 112     L   170
C 113     C   171
F 114     Y   172
V 115     P   173
E 116     A   174
N 117     A   175
M 118     R   176
R 119     Y   177
R 120     L   178
N 121     M   179
G 122     G   180
S 123     S   181
L 124     M   182
N 130     T   183
T 131     P   184
L 132     Q   185
E 133     A   186
E 134     V   187
W 135     L   188
Y 136     A   189
K 137     F   190
F 138     V   191
I 139     A   192
E 140     L   193
E 141     I   194
S 142     P   195
I 143     P   196
H 144     T   197
V 145     L   198
Q 146     P   199
A 147     G   200
D 148     T   201
L 149     N   202
I 150     I   203
I 151     V   204
Y 152     L   205
L 153     G   206
R 154     A   207
T 155     L   208
S 156     P   209
P 157     E   210
E 158     D   211
V 159     R   212
A 160     H   213
Y 161     I   214
E 162     D   215
R 163     R   216
I 164     L   217
R 165     A   218
Q 166     K   219
R 167     R   220
A 168     Q   221
R 169     R   222
S 170     P   223
E 171     G   224
E 172     E   225
S 173     R   226
V 175     L   227
P 176     D   228
L 177     L   229
K 178     A   230
Y 179     M   231
L 180     L   232
Q 181     A   233
E 182     A   234
L 183     I   235
H 184     R   236
E 185     R   237
L 186     V   238
H 187     Y   239
E 188     G   240
D 189     L   241
W 190     L   242
L 191     A   243
I 192     N   244
H 193     T   245
Q 194     V   246
R 195     R   247
R 196     Y   248
P 197     L   249
Q 198     R   320
S 199     S   321
C 200     M   322
K 201     H   323
V 202     V   324
L 203     F   325
V 204     I   326
L 205     L   327
D 206     D   328
A 207     Y   329
D 208     D   330
L 209     Q   331
N 210     S   332
L 211     P   333
E 212     A   334
N 213     G   335
I 214     C   336
G 215     R   337
T 216     D   338
E 217     A   339
Y 218     L   340
Q 219     L   341
R 220     Q   342
S 221     L   343
E 222     T   344
S 223     S   345
S 224     G   346
I 225     M   347
F 226     V   348
D 227     Q   349
A 228     T   350
I 229     H   351
S 230     V   352
S 231     T   353
N 232     T   354
Q 233     P   355
Q 234     G   356
P 235     S   357
S 236     I   358
P 237     P   359
V 238     T   360
L 239     I   361
V 240     C   362
S 241     D   363
P 242     L   364
S 243     A   365
K 244     R   366
R 245     T   367
Q 246     F   368
R 247     A   369
V 248     R   370
A 249     E   371
R 250     M   372
TER
END

