
PFRMAT AL
TARGET T0116
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 1AV1_D
REMARK DATE	1998-02-04
REMARK SCORE	?
L 306 L 44
D 307 K 45
R 308 L 46
V 309 L 47
E 310 D 48
G 311 N 49
F 312 W 50
V 313 D 51
R 314 S 52
E 315 V 53
G 316 T 54
A 317 S 55
L 318 T 56
R 319 F 57
E 320 S 58
G 321 K 59
V 322 L 60
R 323 R 61
R 324 E 62
L 325 Q 63
L 326 L 64
Y 327 G 65
R 328 P 66
L 329 V 67
A 330 T 68
D 331 Q 69
L 332 E 70
E 333 F 71
R 334 W 72
L 335 D 73
A 336 N 74
T 337 L 75
R 338 E 76
L 339 K 77
E 340 E 78
L 341 T 79
G 342 E 80
R 343 G 81
A 344 L 82
S 345 R 83
P 346 Q 84
K 347 E 85
D 348 M 86
L 349 S 87
G 350 K 88
A 351 D 89
L 352 L 90
R 353 E 91
R 354 E 92
S 355 V 93
L 356 K 94
Q 357 A 95
I 358 K 96
L 359 V 97
P 360 Q 98
E 361 P 99
L 362 Y 100
R 363 L 101
A 364 D 102
L 365 D 103
L 366 F 104
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E 369 K 107
V 370 W 108
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P 373 E 111
D 374 M 112
L 375 E 113
S 376 L 114
P 377 Y 115
L 378 R 116
K 379 Q 117
E 380 K 118
E 381 V 119
L 382 E 120
E 383 P 121
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A 385 R 123
L 386 A 124
V 387 E 125
E 388 L 126
D 389 Q 127
P 390 E 128
P 391 G 129
L 392 A 130
K 393 R 131
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S 395 K 133
E 396 L 134
G 397 H 135
G 398 E 136
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I 400 Q 138
R 401 E 139
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G 403 L 141
Y 404 S 142
D 405 P 143
P 406 L 144
D 407 G 145
L 408 E 146
D 409 E 147
A 410 M 148
L 411 R 149
R 412 D 150
A 413 R 151
A 414 A 152
H 415 R 153
R 416 A 154
E 417 H 155
G 418 V 156
V 419 D 157
A 420 A 158
Y 421 L 159
F 422 R 160
L 423 T 161
E 424 H 162
L 425 L 163
E 426 A 164
E 427 P 165
R 428 Y 166
E 429 S 167
R 430 E 169
E 431 L 170
R 432 R 171
T 433 Q 172
G 434 R 173
I 435 L 174
P 436 A 175
T 437 A 176
L 438 R 177
K 439 L 178
V 440 E 179
G 441 A 180
Y 442 L 181
N 443 K 182
A 444 E 183
V 445 N 184
F 446 G 185
G 447 G 186
Y 448 A 187
Y 449 R 188
L 450 L 189
E 451 A 190
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T 453 Y 192
R 454 H 193
P 455 A 194
Y 456 K 195
Y 457 A 196
E 458 T 197
R 459 E 198
V 460 L 200
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Y 464 S 204
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T 469 P 209
L 470 A 210
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D 472 E 212
R 473 D 213
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R 475 R 215
Y 476 Q 216
T 477 G 217
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P 479 L 219
E 480 P 220
M 481 V 221
K 482 L 222
E 483 E 223
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E 485 F 225
R 486 K 226
E 487 V 227
V 488 S 228
Y 489 F 229
R 490 L 230
L 491 S 231
E 492 A 232
A 493 L 233
L 494 E 234
I 495 E 235
R 496 Y 236
R 497 T 237
R 498 K 238
E 499 K 239
E 500 L 240
E 501 N 241
V 502 T 242
TER
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