
PFRMAT AL
TARGET T0116
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1c1g_A
L  276 M 1
D  277 D 2
E  278 A 3
T  279 I 4
R  280 K 5
T  281 K 6
A  282 K 7
P  283 M 8
R  286 Q 9
L  287 M 10
L  288 L 11
Q  289 K 12
S  290 L 13
W  291 D 14
L  292 K 15
R  293 E 16
H  294 N 17
P  295 A 18
L  296 L 19
L  297 D 20
D  298 R 21
R  299 A 22
G  300 D 23
P  301 E 24
L  302 A 25
E  303 E 26
A  304 A 27
R  305 D 28
L  306 K 29
D  307 K 30
R  308 A 31
V  309 A 32
E  310 E 33
G  311 D 34
F  312 S 36
V  313 K 37
R  314 Q 38
E  315 L 39
G  316 E 40
A  317 D 41
L  318 E 42
R  319 L 43
E  320 V 44
G  321 S 45
V  322 L 46
R  323 Q 47
R  324 K 48
L  325 K 49
L  326 L 50
Y  327 K 51
R  328 A 52
L  329 T 53
A  330 E 54
D  331 D 55
L  332 L 64
E  333 K 65
R  334 D 66
L  335 A 67
A  336 Q 68
T  337 E 69
R  338 K 70
L  339 L 71
E  340 E 72
L  341 L 73
G  342 A 74
R  343 E 75
A  344 K 76
S  345 K 77
P  346 A 78
K  347 T 79
D  348 D 80
L  349 A 81
G  350 E 82
A  351 A 83
L  352 D 84
R  353 V 85
R  354 A 86
S  355 S 87
L  356 L 88
Q  357 N 89
I  358 R 90
E  361 R 91
L  362 I 92
A  364 Q 93
L  365 L 94
L  366 F 95
G  367 E 96
E  368 E 97
E  369 E 98
L  375 L 99
S  376 D 100
P  377 R 101
L  378 A 102
K  379 Q 103
E  380 E 104
E  381 R 105
L  382 L 106
E  383 A 107
A  384 T 108
A  385 A 109
L  386 L 110
V  387 L 113
E  388 E 114
D  389 E 115
P  390 A 116
P  391 E 117
L  392 K 118
K  393 A 119
V  394 A 120
S  395 D 121
E  396 E 122
G  397 S 123
G  398 E 124
L  399 R 125
G  403 G 126
Y  404 M 127
D  407 K 128
L  408 V 129
D  409 I 130
A  410 E 131
L  411 S 132
R  412 R 133
A  413 A 134
A  414 Q 135
H  415 K 136
R  416 D 137
E  417 E 138
G  418 E 139
V  419 K 140
A  420 M 141
Y  421 E 142
F  422 I 143
L  423 Q 144
E  424 E 145
L  425 I 146
E  426 Q 147
E  427 L 148
R  428 K 149
E  429 E 150
R  430 A 151
E  431 K 152
R  432 H 153
T  433 I 154
G  434 A 155
I  435 E 156
P  436 D 157
T  437 A 158
L  438 R 160
K  439 K 161
V  440 Y 162
G  441 E 163
Y  442 E 164
N  443 V 165
A  444 A 166
V  445 R 167
F  446 K 168
G  447 L 169
Y  448 V 170
Y  449 I 171
L  450 I 172
E  451 E 173
P  455 S 174
Y  456 D 175
Y  457 L 176
E  458 E 177
R  459 R 178
V  460 A 179
P  461 E 180
K  462 E 181
E  463 R 182
Y  464 A 183
R  465 E 184
P  466 K 189
V  467 C 190
Q  468 A 191
T  469 E 192
L  470 L 193
K  471 E 194
D  472 E 195
R  473 E 196
Q  474 I 197
R  475 K 198
Y  476 T 199
T  477 V 200
L  478 T 201
P  479 N 202
E  480 N 203
M  481 L 204
K  482 K 205
E  483 S 206
K  484 L 207
E  485 E 208
R  486 E 212
E  487 K 213
V  488 Y 214
Y  489 S 215
R  490 Q 216
L  491 K 217
E  492 E 218
A  493 D 219
L  494 K 220
I  495 Y 221
R  496 E 222
R  497 E 223
R  498 E 224
E  499 I 225
E  500 K 226
E  501 V 227
V  502 L 228
F  503 S 229
L  504 D 230
E  505 K 231
V  506 L 232
R  507 K 233
E  508 E 236
R  509 T 237
A  510 R 238
K  511 A 239
R  512 E 240
Q  513 F 241
A  514 A 242
E  515 E 243
A  516 R 244
L  517 V 246
R  518 T 247
E  519 K 248
A  520 L 249
A  521 E 250
R  522 K 251
I  523 S 252
L  524 I 253
A  525 D 254
E  526 D 255
L  527 L 256
D  528 D 258
V  529 E 259
Y  530 L 260
A  531 Y 261
A  532 A 262
L  533 Y 267
A  534 K 268
E  535 A 269
V  536 I 270
A  537 S 271
V  538 E 272
R  539 E 273
Y  540 L 274
G  541 D 275
Y  542 H 276
V  543 A 277
R  544 L 278
P  545 N 279
R  546 D 280
F  547 M 281
G  548 T 282
D  549 S 283
R  550 I 284
TER
END

