
PFRMAT AL
TARGET T0116
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=7.55 
REMARK CONFIDENCE: CERTAIN   (99% confidence [ ZSCORE>=6.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1b0ua
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1b0u_A
R 544     N     5
P 545     K     6
R 546     L     7
F 547     H     8
G 548     V     9
D 549     I    10
R 550     D    11
L 551     L    12
Q 552     H    13
I 553     K    14
R 554     R    15
A 555     Y    16
G 556     G    17
R 557     G    18
H 558     H    19
P 559     E    20
V 560     V    21
V 561     L    22
E 562     K    23
R 563     G    24
R 564     V    25
T 565     S    26
E 566     L    27
F 567     Q    28
V 568     A    29
P 569     R    30
A 575     A    31
H 576     G    32
E 577     D    33
L 578     V    34
V 579     I    35
L 580     S    36
I 581     I    37
T 582     I    38
G 583     G    39
P 584     S    40
N 585     S    41
M 586     G    42
A 587     S    43
G 588     G    44
K 589     K    45
S 590     S    46
T 591     T    47
F 592     F    48
L 593     L    49
R 594     R    50
Q 595     C    51
T 596     Q    68
A 597     N    69
L 598     I    70
I 599     N    71
A 600     L    72
L 601     V    73
L 602     R    74
A 603     D    75
Q 604     K    76
V 605     D    77
G 606     G    78
S 607     Q    79
F 608     L    80
V 609     K    81
P 610     V    82
A 611     A    83
E 612     D    84
E 613     K    85
A 614     N    86
H 615     Q    87
L 616     L    88
P 617     R    89
L 618     L    90
F 619     L    91
D 620     R    92
G 621     T    93
I 622     R    94
Y 623     L    95
T 624     T    96
R 625     M    97
I 626     V    98
G 627     F    99
A 628     Q   100
S 629     H   101
D 630     F   102
D 631     N   103
L 632     L   104
A 633     W   105
G 634     S   106
G 635     H   107
K 636     M   108
S 637     T   109
T 638     V   110
F 639     L   111
M 640     E   112
V 641     N   113
E 642     V   114
M 643     M   115
E 644     E   116
E 645     A   117
V 646     P   118
A 647     I   119
L 648     Q   120
I 649     V   121
L 650     L   122
K 651     H   127
E 652     D   128
A 653     A   129
T 654     R   130
E 655     E   131
N 656     R   132
S 657     A   133
L 658     L   134
V 659     K   135
L 660     Y   136
L 661     L   137
D 662     A   138
E 663     K   139
V 664     V   140
G 665     G   141
R 666     Q   147
G 667     G   148
T 668     K   149
S 669     Y   150
S 670     P   151
L 671     V   152
D 672     G   156
G 673     G   157
V 674     Q   158
A 675     Q   159
I 676     Q   160
A 677     R   161
T 678     V   162
A 679     S   163
V 680     I   164
A 681     A   165
E 682     R   166
A 683     A   167
L 684     L   168
H 685     A   169
E 686     M   170
R 687     E   171
R 688     P   172
A 689     D   173
Y 690     V   174
T 691     L   175
L 692     L   176
F 693     F   177
A 694     D   178
T 695     E   179
H 696     P   180
Y 697     T   181
F 698     S   182
E 699     A   183
L 700     L   184
T 701     D   185
A 702     P   186
L 703     E   187
G 704     L   188
L 705     V   189
P 706     G   190
R 707     E   191
L 708     V   192
K 709     L   193
N 710     R   194
L 711     I   195
H 712     M   196
V 713     Q   197
A 714     Q   198
A 715     L   199
R 716     A   200
E 717     E   201
E 718     E   202
A 719     G   203
G 720     K   204
G 721     T   205
L 722     M   206
V 723     V   207
F 724     V   208
Y 725     V   209
H 726     T   210
Q 727     H   211
V 728     E   212
L 729     M   213
P 730     G   214
G 731     F   215
P 732     A   216
A 733     R   217
S 734     H   218
K 735     V   219
S 736     S   220
Y 737     S   221
G 738     H   222
V 739     V   223
E 740     I   224
V 741     F   225
A 742     L   226
A 743     E   232
M 744     E   233
A 745     E   234
G 746     G   235
L 747     D   236
P 748     P   237
K 749     E   238
E 750     Q   239
V 751     V   240
V 752     F   241
A 753     G   242
R 754     N   243
A 755     P   244
R 756     Q   245
A 757     P   247
L 758     R   248
L 759     L   249
Q 760     Q   250
A 761     Q   251
M 762     F   252
A 763     L   253
A 764     K   254
R 765     G   255
R 766     S   256
E 767     L   257
G 768     K   258
A 769     K   259
L 770     L   260
D 771     E   261
TER
END

