
PFRMAT AL
TARGET T0115
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 2chr
V 20 E 39
G 21 G 40
F 22 L 41
D 23 V 42
V 24 G 43
F 25 V 44
G 26 G 45
L 27 E 46
C 28 G 47
L 29 G 48
K 30 S 49
E 31 V 50
P 32 G 51
Y 33 G 52
D 34 P 53
V 35 V 54
I 36 W 55
E 37 S 56
V 38 A 57
E 39 E 58
A 40 C 59
I 41 A 60
D 42 E 61
D 43 T 62
K 44 I 63
E 45 K 64
I 46 I 65
I 47 I 66
I 48 V 67
E 49 E 68
V 50 R 69
D 51 Y 70
D 52 L 71
K 53 A 72
N 54 P 73
I 55 H 74
P 56 L 75
T 57 L 76
D 58 G 77
P 59 T 78
D 60 D 79
K 61 A 80
N 62 F 81
V 63 N 82
A 64 V 83
G 65 S 84
I 66 G 85
V 67 A 86
A 68 L 87
K 69 Q 88
K 70 T 89
M 71 M 90
I 72 A 91
D 73 R 92
D 74 A 93
F 75 V 94
N 76 T 95
I 77 G 96
G 78 N 97
K 79 A 98
G 80 S 99
V 81 A 100
K 82 K 101
A 99 A 102
A 100 A 103
S 101 V 104
S 102 E 105
A 103 M 106
G 104 A 107
T 105 L 108
A 106 L 109
Y 107 D 110
A 108 L 111
I 109 K 112
N 110 A 113
E 111 R 114
L 112 A 115
F 113 L 116
K 114 G 117
L 115 V 118
N 116 S 119
L 117 I 120
L 120 A 121
K 121 E 122
L 122 L 123
V 123 L 124
D 124 G 125
Y 125 G 126
A 126 P 127
S 127 L 128
Y 128 R 129
G 129 S 130
E 130 A 131
L 131 I 132
A 132 P 133
S 133 I 134
S 134 A 135
G 135 W 136
A 136 T 137
K 137 L 138
H 138 A 139
A 139 S 140
D 140 G 141
N 141 D 142
V 142 T 143
A 143 K 144
P 144 R 145
A 145 D 146
I 146 L 147
F 147 D 148
F 150 A 150
T 151 V 151
M 152 E 152
V 153 M 153
T 154 I 154
N 155 E 155
Y 156 R 156
E 157 R 157
P 158 R 158
L 159 H 159
E 160 N 160
V 161 R 161
L 162 F 162
H 163 K 163
I 164 V 164
P 165 K 165
I 166 L 166
D 167 Q 172
F 168 D 173
K 169 D 174
L 170 L 175
D 171 I 176
I 172 H 177
L 173 M 178
I 174 E 179
A 175 A 180
I 176 L 181
P 177 S 182
N 178 N 183
I 179 S 184
S 180 L 185
I 181 G 186
N 182 S 187
T 183 K 188
K 184 A 189
E 185 Y 190
A 186 L 191
R 187 R 192
E 188 V 193
I 189 D 194
L 190 V 195
P 191 N 196
K 192 Q 197
A 193 A 198
V 194 W 199
G 195 D 200
L 196 E 201
K 197 Q 202
D 198 V 203
L 199 A 204
V 200 S 205
N 201 V 206
N 202 Y 207
V 203 I 208
G 204 P 209
K 205 E 210
A 206 L 211
C 207 E 212
G 208 A 213
M 209 L 214
V 210 G 215
Y 211 V 216
A 212 E 217
L 213 L 218
Y 214 I 219
N 215 E 220
K 216 E 226
D 217 N 227
K 218 T 228
S 219 Q 229
L 220 A 230
F 221 L 231
G 222 R 232
R 223 R 233
Y 224 L 234
M 225 S 235
M 226 D 236
S 227 N 237
D 228 N 238
K 229 R 239
V 230 V 240
E 232 A 241
P 233 I 242
V 234 M 243
R 235 A 244
G 236 D 245
K 237 E 246
L 238 S 247
I 239 L 248
P 240 S 249
N 241 T 250
Y 242 L 251
F 243 A 252
K 244 S 253
I 245 A 254
K 246 F 255
E 247 D 256
E 248 L 257
V 249 A 258
K 250 R 259
D 251 D 260
K 252 R 261
V 253 S 262
Y 254 F 266
G 255 S 267
I 256 L 268
T 257 K 269
I 258 L 270
S 259 C 271
G 260 N 272
S 261 M 273
G 262 G 274
P 263 G 275
F 268 V 276
P 269 S 277
K 270 A 278
E 271 T 279
E 272 Q 280
F 273 K 281
I 274 I 282
D 275 A 283
E 276 A 284
V 277 V 285
E 278 A 286
N 279 E 287
I 280 A 288
TER
END

