
PFRMAT AL
TARGET T0114
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1pto_L
N 3 N 9
R 4 F 10
T 5 T 11
D 6 V 12
C 7 Q 13
N 8 E 14
E 9 L 15
N 10 A 16
S 11 L 17
Y 12 K 18
L 13 L 19
E 14 K 20
I 15 G 21
H 16 K 22
N 17 N 23
N 18 Q 24
E 19 E 25
G 20 F 26
R 21 C 27
D 22 L 28
T 23 T 29
L 24 A 30
F 26 F 31
A 27 M 32
N 28 S 33
A 29 G 34
G 30 R 35
T 31 S 36
M 32 L 37
P 33 V 38
V 34 R 39
A 35 A 40
I 36 C 41
Y 37 L 42
G 38 S 43
V 39 D 44
N 40 A 45
W 41 G 46
V 42 H 47
E 43 E 48
S 44 H 49
G 45 D 50
N 46 T 51
N 47 W 52
V 48 F 53
V 49 D 54
T 50 T 55
L 51 L 57
Q 52 G 58
F 53 F 59
Q 54 A 60
L 57 I 61
S 58 S 62
D 59 A 63
P 60 Y 64
R 61 A 65
L 62 L 66
E 63 K 67
T 64 S 68
I 65 I 70
T 66 A 71
L 67 L 72
Q 68 T 73
K 69 V 74
W 70 E 75
G 71 D 76
S 72 S 77
W 73 P 78
N 74 Y 79
P 75 P 80
G 76 G 81
H 77 T 82
I 78 P 83
H 79 G 84
E 80 D 85
I 81 L 86
L 82 L 87
S 83 E 88
I 84 L 89
R 85 Q 90
I 86 I 91
TER
END

