
PFRMAT AL
TARGET T0114
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 2sn3
M 1 L 5
I 2 V 6
N 3 K 7
R 4 K 8
T 5 S 9
D 6 D 10
C 7 G 11
N 8 C 12
E 9 K 13
N 10 Y 14
REMARK 
S 11 G 15
Y 12 C 16
REMARK 
L 13 L 17
REMARK 
E 14 K 18
I 15 L 19
H 16 G 20
REMARK 
N 17 E 21
N 18 N 22
E 19 E 23
REMARK 
G 20 G 24
R 21 C 25
REMARK 
D 22 D 26
T 23 T 27
L 24 E 28
C 25 C 29
F 26 K 30
A 27 A 31
N 28 N 33
A 29 Q 34
G 30 G 35
T 31 G 36
M 32 S 37
P 33 Y 38
V 34 G 39
A 35 Y 40
I 36 C 41
Y 37 Y 42
G 38 A 43
V 39 F 44
N 40 A 45
W 41 W 47
V 42 C 48
E 43 E 49
S 44 G 50
N 46 E 53
N 47 S 54
V 48 T 55
V 49 P 56
T 50 T 57
L 51 Y 58
Q 52 P 59
F 53 L 60
Q 54 P 61
R 55 N 62
N 56 K 63
TER
END

