
PFRMAT AL
TARGET T0114
AUTHOR 3772-8254-1905
REMARK loop 40-50 and following sec str move from 1vca position
REMARK will be interesting to compare both positions
METHOD Automatic CNB-server and
METHOD manual/profile based modification of the selected alignment
METHOD after hssp-fssp-sas-pfam checking
METHOD manual visualisation of alignments
MODEL   1
PARENT 1vca_A
M    1    K    2
I    2    I    3
N    3    E    4
R    4    T    5
T    5    T    6
D    6    P    7
E    9    E    8
S   11    S    9
Y   12    R   10
L   13    Y   11
E   14    L   12
I   15    A   13
H   16    Q   14
N   17    I   15
N   18    G   16
E   19    D   17
G   20    S   18
R   21    V   19
D   22    S   20
T   23    L   21
L   24    T   22
C   25    C   23
F   26    S   24
A   27    T   25
N   28    T   26
A   29    G   27
G   30    C   28
T   31    E   29
M   32    S   30
P   33    P   31
V   34    F   32
A   35    F   33
I   36    S   34
Y   37    W   35
V   39    R   36
N   40    T   37
W   41    Q   38
V   42    I   39
E   43    D   40
S   44    S   41
G   45    P   42
N   46    L   43
N   47    N   44
V   48    T   55
V   49    L   56
T   50    T   57
L   51    M   58
Q   52    N   59
F   53    V   61
Q   54    S   62
R   55    F   63
N   56    G   64
L   57    N   65
S   58    E   66
D   59    H   67
P   60    S   68
R   61    Y   69
L   62    L   70
E   63    C   71
T   64    T   72
I   65    A   73
T   66    T   74
L   67    C   75
Q   68    E   76
P   75    S   77
G   76    R   78
H   77    K   79
I   78    L   80
H   79    E   81
E   80    K   82
I   81    G   83
L   82    I   84
S   83    Q   85
I   84    V   86
R   85    E   87
I   86    I   88
Y   87    Y   89
TER
END


