
PFRMAT AL
TARGET T0114
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.90 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1ush_1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1ush
I   2     I   413
N   3     E   414
R   4     A   415
T   5     G   416
D   6     D   417
C   7     I   418
N   8     S   419
E   9     Y   420
N  10     K   421
S  11     N   422
Y  12     V   423
L  13     L   424
E  14     K   425
I  15     V   426
H  16     Q   427
N  17     P   428
N  18     F   429
E  19     T   439
G  20     G   440
R  21     K   441
D  22     E   442
T  23     V   443
L  24     I   444
C  25     D   445
F  26     Y   446
A  27     L   447
N  28     T   448
A  29     A   449
G  30     D   456
T  31     S   457
M  32     G   458
P  33     A   459
V  34     Y   460
A  35     P   461
I  36     Q   462
Y  37     F   463
G  38     N   465
V  39     V   466
N  40     S   467
W  41     F   468
V  42     V   469
E  43     A   470
S  44     K   471
G  45     D   472
N  46     G   473
N  47     K   474
V  48     L   475
V  49     N   476
T  50     D   477
L  51     L   478
Q  52     K   479
F  53     I   480
Q  54     K   481
R  55     G   482
N  56     E   483
L  57     P   484
S  58     V   485
D  59     D   486
P  60     P   487
R  61     T   490
L  62     Y   491
E  63     R   492
T  64     M   493
I  65     A   494
T  66     T   495
L  67     L   496
Q  68     N   497
K  69     F   498
W  70     N   499
G  71     A   500
S  72     T   501
W  73     G   502
N  74     K   512
P  75     P   513
G  76     G   514
H  77     Y   515
I  78     V   516
H  79     N   517
E  80     E   524
I  81     V   525
L  82     L   526
S  83     K   527
I  84     A   528
R  85     Y   529
I  86     I   530
Y  87     Q   531
TER
END

