
PFRMAT AL
TARGET T0113
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 1fmc_B
A 3 S 4
A 4 D 5
V 5 N 6
R 6 L 7
S 7 R 8
V 8 L 9
K 9 D 10
G 10 G 11
L 11 K 12
V 12 C 13
A 13 A 14
V 14 I 15
I 15 I 16
T 16 T 17
G 17 G 18
G 18 A 19
A 19 G 20
S 20 A 21
G 21 G 22
L 22 I 23
G 23 G 24
L 24 K 25
S 25 E 26
T 26 I 27
A 27 A 28
K 28 I 29
R 29 T 30
L 30 F 31
V 31 A 32
G 32 T 33
Q 33 A 34
G 34 G 35
A 35 A 36
T 36 S 37
A 37 V 38
V 38 V 39
L 39 V 40
L 40 S 41
D 41 D 42
V 42 I 43
P 43 N 44
N 44 A 45
S 45 D 46
E 46 A 47
G 47 A 48
E 48 N 49
T 49 H 50
E 50 V 51
A 51 V 52
K 52 D 53
K 53 E 54
L 54 I 55
G 55 G 59
G 56 G 60
N 57 Q 61
C 58 A 62
I 59 F 63
F 60 A 64
A 61 C 65
P 62 R 66
A 63 C 67
N 64 D 68
V 65 I 69
T 66 T 70
S 67 S 71
E 68 E 72
K 69 Q 73
E 70 E 74
V 71 L 75
Q 72 S 76
A 73 A 77
A 74 L 78
L 75 A 79
T 76 D 80
L 77 F 81
A 78 A 82
K 79 I 83
E 80 S 84
K 81 K 85
F 82 L 86
G 83 G 87
R 84 K 88
I 85 V 89
D 86 D 90
V 87 I 91
A 88 L 92
V 89 V 93
N 90 N 94
C 91 N 95
A 92 A 96
G 93 G 97
I 94 G 98
A 95 G 99
V 96 G 100
A 97 P 101
I 98 K 102
K 99 P 103
T 100 F 104
V 108 D 105
H 109 M 106
T 110 P 107
L 111 M 108
E 112 A 109
D 113 D 110
F 114 F 111
Q 115 R 112
R 116 R 113
V 117 A 114
I 118 Y 115
N 119 E 116
V 120 L 117
N 121 N 118
L 122 V 119
I 123 F 120
G 124 S 121
T 125 F 122
F 126 F 123
N 127 H 124
V 128 L 125
I 129 S 126
R 130 Q 127
L 131 L 128
V 132 V 129
A 133 A 130
G 134 P 131
V 135 E 132
M 136 M 133
G 137 E 134
Q 138 K 135
N 139 N 136
Q 146 G 137
R 147 G 138
G 148 G 139
V 149 V 140
I 150 I 141
I 151 L 142
N 152 T 143
T 153 I 144
A 154 T 145
S 155 S 146
V 156 M 147
A 157 A 148
A 158 A 149
F 159 E 150
E 160 N 151
G 161 K 152
Q 162 N 153
V 163 I 154
G 164 N 155
Q 165 M 156
A 166 T 157
A 167 S 158
Y 168 Y 159
S 169 A 160
A 170 S 161
S 171 S 162
K 172 K 163
G 173 A 164
G 174 A 165
I 175 A 166
V 176 S 167
G 177 H 168
M 178 L 169
T 179 V 170
L 180 R 171
P 181 N 172
I 182 M 173
A 183 A 174
R 184 F 175
D 185 D 176
L 186 L 177
A 187 G 178
P 188 E 179
I 189 K 180
G 190 N 181
I 191 I 182
R 192 R 183
V 193 V 184
V 194 N 185
T 195 G 186
I 196 I 187
A 197 A 188
P 198 P 189
G 199 G 190
L 200 A 191
F 201 I 192
A 202 L 193
T 203 T 194
P 204 D 195
L 205 A 196
L 206 L 197
T 207 K 198
T 208 S 199
L 209 V 200
P 210 T 202
D 211 P 203
K 212 E 204
V 213 I 205
R 214 E 206
N 215 Q 207
F 216 K 208
L 217 M 209
A 218 L 210
S 219 Q 211
Q 220 H 212
V 221 T 213
P 222 P 214
F 223 I 215
S 225 R 216
R 226 R 217
L 227 L 218
G 228 G 219
D 229 Q 220
P 230 P 221
A 231 Q 222
E 232 D 223
Y 233 I 224
A 234 A 225
H 235 N 226
L 236 A 227
V 237 A 228
Q 238 L 229
M 239 F 230
V 240 L 231
I 241 C 232
E 242 S 233
N 243 A 236
P 244 S 237
F 245 W 238
L 246 V 239
N 247 S 240
G 248 G 241
E 249 Q 242
V 250 I 243
I 251 L 244
R 252 T 245
L 253 V 246
D 254 S 247
G 255 G 248
A 256 G 249
I 257 G 250
R 258 V 251
TER
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