
PFRMAT AL
TARGET T0113
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 2hsd_D
S 7 D 3
V 8 L 4
K 9 S 5
G 10 G 6
L 11 K 7
V 12 T 8
A 13 V 9
V 14 I 10
I 15 I 11
T 16 T 12
G 17 G 13
G 18 G 14
A 19 A 15
S 20 R 16
G 21 G 17
L 22 L 18
G 23 G 19
L 24 A 20
S 25 E 21
T 26 A 22
A 27 A 23
K 28 R 24
R 29 Q 25
L 30 A 26
V 31 V 27
G 32 A 28
Q 33 A 29
G 34 G 30
A 35 A 31
T 36 R 32
A 37 V 33
V 38 V 34
L 39 L 35
L 40 A 36
D 41 D 37
V 42 V 38
P 43 L 39
N 44 D 40
S 45 E 41
E 46 E 42
G 47 G 43
E 48 A 44
T 49 A 45
E 50 T 46
A 51 A 47
K 52 R 48
K 53 E 49
L 54 L 50
G 55 G 51
G 56 D 52
N 57 A 53
C 58 A 54
I 59 R 55
F 60 Y 56
A 61 Q 57
P 62 H 58
A 63 L 59
N 64 D 60
V 65 V 61
T 66 T 62
S 67 I 63
E 68 E 64
K 69 E 65
E 70 D 66
V 71 W 67
Q 72 Q 68
A 73 R 69
A 74 V 70
L 75 V 71
T 76 A 72
L 77 Y 73
A 78 A 74
K 79 R 75
E 80 E 76
K 81 E 77
F 82 F 78
G 83 G 79
R 84 S 80
I 85 V 81
D 86 D 82
V 87 G 83
A 88 L 84
V 89 V 85
N 90 N 86
C 91 N 87
A 92 A 88
G 93 G 89
I 94 I 90
A 95 S 91
V 96 T 92
A 97 G 93
K 104 M 94
K 105 F 95
N 106 L 96
Q 107 E 97
V 108 T 98
H 109 E 99
T 110 S 100
L 111 V 101
E 112 E 102
D 113 R 103
F 114 F 104
Q 115 R 105
R 116 K 106
V 117 V 107
I 118 V 108
N 119 E 109
V 120 I 110
N 121 N 111
L 122 L 112
I 123 T 113
G 124 G 114
T 125 V 115
F 126 F 116
N 127 I 117
V 128 G 118
I 129 M 119
R 130 K 120
L 131 T 121
V 132 V 122
A 133 I 123
G 134 P 124
V 135 A 125
M 136 M 126
G 137 K 127
Q 138 D 128
N 139 A 129
Q 146 G 130
R 147 G 131
G 148 G 132
V 149 S 133
I 150 I 134
I 151 V 135
N 152 N 136
T 153 I 137
A 154 S 138
S 155 S 139
V 156 A 140
A 157 A 141
A 158 G 142
F 159 L 143
E 160 M 144
G 161 G 145
Q 162 L 146
V 163 A 147
G 164 L 148
Q 165 T 149
A 166 S 150
A 167 S 151
Y 168 Y 152
S 169 G 153
A 170 A 154
S 171 S 155
K 172 K 156
G 173 W 157
G 174 G 158
I 175 V 159
V 176 R 160
G 177 G 161
M 178 L 162
T 179 S 163
L 180 K 164
P 181 L 165
I 182 A 166
A 183 A 167
R 184 V 168
D 185 E 169
L 186 L 170
A 187 G 171
P 188 T 172
I 189 D 173
G 190 R 174
I 191 I 175
R 192 R 176
V 193 V 177
V 194 N 178
T 195 S 179
I 196 V 180
A 197 H 181
P 198 P 182
G 199 G 183
L 200 M 184
F 201 T 185
A 202 Y 186
T 203 T 187
P 204 P 188
L 205 M 189
L 206 T 190
T 207 A 191
T 208 E 192
L 209 T 193
P 210 G 194
D 211 I 195
K 212 R 196
V 213 Q 197
R 214 G 198
N 215 E 199
F 216 G 200
L 217 N 201
A 218 Y 202
S 219 P 203
Q 220 N 204
V 221 T 205
P 222 P 206
F 223 M 207
S 225 G 208
R 226 R 209
L 227 V 210
G 228 G 211
D 229 E 213
P 230 P 214
A 231 G 215
E 232 E 216
Y 233 I 217
A 234 A 218
H 235 G 219
L 236 A 220
V 237 V 221
Q 238 V 222
M 239 K 223
V 240 L 224
I 241 L 225
E 242 S 226
N 243 S 229
P 244 S 230
F 245 Y 231
L 246 V 232
N 247 T 233
G 248 G 234
E 249 A 235
V 250 E 236
I 251 L 237
R 252 A 238
L 253 V 239
D 254 D 240
G 255 G 241
A 256 G 242
I 257 W 243
R 258 T 244
M 259 T 245
Q 260 G 246
P 261 P 247
TER
END

