
PFRMAT AL
TARGET T0113
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1b16_A
R    6 M 1
S    7 D 2
V    8 L 3
K    9 T 4
G   10 N 5
L   11 K 6
V   12 N 7
A   13 V 8
V   14 I 9
I   15 F 10
T   16 V 11
G   17 A 12
G   18 A 13
A   19 L 14
S   20 G 15
G   21 G 16
L   22 I 17
G   23 G 18
L   24 L 19
S   25 D 20
T   26 T 21
A   27 S 22
K   28 R 23
R   29 E 24
L   30 L 25
V   31 V 26
G   32 K 27
Q   33 R 28
G   34 N 29
A   35 L 30
T   36 K 31
A   37 V 34
V   38 I 35
L   39 L 36
L   40 D 37
D   41 R 38
V   42 V 39
P   43 E 40
N   44 N 41
S   45 P 42
E   46 T 43
G   47 A 44
E   48 L 45
T   49 A 46
E   50 E 47
A   51 L 48
K   52 K 49
K   53 A 50
L   54 I 51
G   55 K 54
G   56 V 55
N   57 N 56
C   58 I 57
I   59 T 58
F   60 F 59
A   61 H 60
P   62 T 61
A   63 Y 62
N   64 D 63
V   65 V 64
T   66 T 65
S   67 V 66
E   68 V 68
K   69 A 69
E   70 E 70
V   71 S 71
Q   72 K 72
A   73 K 73
A   74 L 74
L   75 L 75
T   76 K 76
L   77 K 77
A   78 I 78
K   79 F 79
E   80 D 80
K   81 Q 81
F   82 L 82
G   83 K 83
R   84 T 84
I   85 V 85
D   86 D 86
V   87 I 87
A   88 L 88
V   89 I 89
N   90 N 90
C   91 G 91
A   92 A 92
G   93 G 93
I   94 I 94
H  109 L 95
T  110 D 96
L  111 D 97
E  112 H 98
D  113 Q 99
F  114 I 100
Q  115 E 101
R  116 R 102
V  117 T 103
I  118 I 104
N  119 A 105
V  120 I 106
N  121 N 107
L  122 F 108
I  123 T 109
G  124 G 110
T  125 L 111
F  126 V 112
N  127 N 113
V  128 T 114
I  129 T 115
R  130 T 116
L  131 A 117
V  132 I 118
A  133 L 119
G  134 D 120
V  135 F 121
M  136 W 122
G  137 D 123
Q  138 K 124
N  139 R 125
E  140 K 126
G  144 G 127
G  145 G 128
Q  146 P 129
R  147 G 130
G  148 G 131
V  149 I 132
I  150 I 133
I  151 A 134
N  152 N 135
T  153 I 136
A  154 C 137
S  155 S 138
V  156 V 139
A  157 T 140
A  158 G 141
F  159 F 142
E  160 N 143
G  161 A 144
Q  162 I 145
V  163 H 146
G  164 Q 147
Q  165 V 148
A  166 P 149
A  167 V 150
Y  168 Y 151
S  169 S 152
A  170 A 153
S  171 S 154
K  172 K 155
G  173 A 156
G  174 A 157
I  175 V 158
V  176 V 159
G  177 S 160
M  178 F 161
T  179 T 162
L  180 N 163
P  181 S 164
I  182 L 165
A  183 A 166
R  184 K 167
D  185 L 168
L  186 A 169
A  187 P 170
P  188 I 171
I  189 T 172
G  190 G 173
I  191 V 174
R  192 T 175
V  193 A 176
V  194 Y 177
T  195 S 178
I  196 I 179
A  197 N 180
P  198 P 181
G  199 G 182
L  200 I 183
F  201 T 184
A  202 R 185
T  203 T 186
P  204 P 187
L  205 L 188
L  206 V 189
T  207 H 190
T  208 T 191
L  209 F 192
P  210 W 195
D  211 L 196
K  212 D 197
V  213 V 198
R  214 E 199
N  215 P 200
F  216 R 201
L  217 V 202
A  218 A 203
S  219 E 204
V  221 L 205
P  222 L 206
F  223 L 207
P  224 S 208
S  225 H 209
R  226 P 210
L  227 T 211
G  228 Q 212
D  229 T 213
P  230 S 214
A  231 E 215
E  232 Q 216
Y  233 C 217
A  234 G 218
H  235 Q 219
L  236 N 220
V  237 F 221
Q  238 V 222
M  239 K 223
V  240 A 224
I  241 I 225
E  242 E 226
N  243 A 227
P  244 N 228
F  245 K 229
N  247 N 230
G  248 G 231
E  249 A 232
V  250 I 233
I  251 W 234
R  252 K 235
L  253 L 236
D  254 D 237
G  255 S 252
A  256 H 253
I  257 I 254
TER
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