
PFRMAT RR
TARGET T0109
AUTHOR 8543-3973-4583
REMARK prediction made by An-Suei Yang
REMARK Columbia University, Department of Pharmacology
METHOD prediction made by PrISM, Protein Informatics System for Modeling
METHOD protein structure database obtained by parsing PDB entries into domains
METHOD sequence database obtained from SWISS-PROT
METHOD 2nd prediction: neuro network algorithm in PrISM plus threading
METHOD pairwise alignment: dynamic programming (DP) algorithm
METHOD multiple alignment: progressive multi-aligning algorithm
METHOD structure alignment: double DP algorithm
METHOD plus rigid body superimposition
METHOD sequence-structure alignment: variation of DP algorithm 
METHOD plus sequence-structure fitness function
METHOD modeling: fragmental modeling based on a multiple-aligned parents
METHOD refinement:none
MODEL  1
MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQ
SDELLNKMNDWCQKTHSENGLIERIKASKLTERAAELQTLDFLKKWVPKG
ASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARWKPEILE
GFKKENTHLALDDIRESIKELAYYREHFMKLD 
   3    6     0    8     1.0
   3    7     0    8     1.0
   3    8     0    8     1.0
   3    9     0    8     1.0
   3   10     0    8     1.0
   3   11     0    8     1.0
   3   21     0    8     1.0
   3  108     0    8     1.0
   4    6     0    8     1.0
   4    7     0    8     1.0
   4   10     0    8     1.0
   5    7     0    8     1.0
   5   78     0    8     1.0
   5   79     0    8     1.0
   6    8     0    8     1.0
   6   79     0    8     1.0
   6  105     0    8     1.0
   6  109     0    8     1.0
   7    9     0    8     1.0
   7   10     0    8     1.0
   8   10     0    8     1.0
   8   11     0    8     1.0
   8   12     0    8     1.0
   8   20     0    8     1.0
   8   21     0    8     1.0
   8   22     0    8     1.0
   8  108     0    8     1.0
   8  109     0    8     1.0
   8  112     0    8     1.0
   9   11     0    8     1.0
   9   12     0    8     1.0
   9   13     0    8     1.0
   9   14     0    8     1.0
   9   21     0    8     1.0
   9  106     0    8     1.0
   9  107     0    8     1.0
   9  108     0    8     1.0
   9  109     0    8     1.0
  10   12     0    8     1.0
  10   21     0    8     1.0
  11   13     0    8     1.0
  11   20     0    8     1.0
  11   21     0    8     1.0
  11   22     0    8     1.0
  11   23     0    8     1.0
  11   24     0    8     1.0
  11   25     0    8     1.0
  11  108     0    8     1.0
  12   14     0    8     1.0
  12   17     0    8     1.0
  12   19     0    8     1.0
  12   20     0    8     1.0
  12   21     0    8     1.0
  12   22     0    8     1.0
  12   23     0    8     1.0
  12  108     0    8     1.0
  12  111     0    8     1.0
  13   16     0    8     1.0
  13   17     0    8     1.0
  13   21     0    8     1.0
  13  108     0    8     1.0
  14   16     0    8     1.0
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  14  107     0    8     1.0
  15   17     0    8     1.0
  15  107     0    8     1.0
  16   18     0    8     1.0
  17   19     0    8     1.0
  19   22     0    8     1.0
  19   23     0    8     1.0
  19   25     0    8     1.0
  19   26     0    8     1.0
  19  111     0    8     1.0
  19  115     0    8     1.0
  20   22     0    8     1.0
  20   25     0    8     1.0
  20   26     0    8     1.0
  20  108     0    8     1.0
  20  111     0    8     1.0
  20  112     0    8     1.0
  20  115     0    8     1.0
  20  116     0    8     1.0
  21   25     0    8     1.0
  21  108     0    8     1.0
  21  111     0    8     1.0
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  22   24     0    8     1.0
  22   25     0    8     1.0
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  22   27     0    8     1.0
  22   28     0    8     1.0
  22   29     0    8     1.0
  22   75     0    8     1.0
  22  112     0    8     1.0
  22  115     0    8     1.0
  23   25     0    8     1.0
  23   26     0    8     1.0
  23   27     0    8     1.0
  23   60     0    8     1.0
  24   26     0    8     1.0
  24   27     0    8     1.0
  24   28     0    8     1.0
  24   58     0    8     1.0
  24   59     0    8     1.0
  24   60     0    8     1.0
  24   75     0    8     1.0
  25   27     0    8     1.0
  25   28     0    8     1.0
  25   29     0    8     1.0
  25   75     0    8     1.0
  25  112     0    8     1.0
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  26   28     0    8     1.0
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  27   62     0    8     1.0
  28   30     0    8     1.0
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  28   68     0    8     1.0
  28   71     0    8     1.0
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  28   75     0    8     1.0
  29   31     0    8     1.0
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  29   33     0    8     1.0
  29   72     0    8     1.0
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  30   32     0    8     1.0
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  31   35     0    8     1.0
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  33  122     0    8     1.0
  34   36     0    8     1.0
  35   39     0    8     1.0
  35   42     0    8     1.0
  35   64     0    8     1.0
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  35   68     0    8     1.0
  36   38     0    8     1.0
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  36   42     0    8     1.0
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  36   65     0    8     1.0
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  36   69     0    8     1.0
  36  131     0    8     1.0
  36  134     0    8     1.0
  37   39     0    8     1.0
  37  125     0    8     1.0
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  38   40     0    8     1.0
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  39   41     0    8     1.0
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  39   43     0    8     1.0
  39   65     0    8     1.0
  39   69     0    8     1.0
  39  131     0    8     1.0
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  40   42     0    8     1.0
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  41   43     0    8     1.0
  41   44     0    8     1.0
  41   45     0    8     1.0
  41   66     0    8     1.0
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  42   44     0    8     1.0
  42   45     0    8     1.0
  42   65     0    8     1.0
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  43   45     0    8     1.0
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  45   47     0    8     1.0
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END

