
PFRMAT AL
TARGET T0109
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  2
PARENT 1D5A_A
REMARK DATE	2000-03-24
REMARK SCORE	 0.045	31.8	18/112 (16%)
I 25 L 121
I 26 I 122
E 27 D 123
I 28 R 124
A 29 G 125
T 30 L 126
I 31 I 127
V 32 P 128
T 33 M 129
D 34 E 130
K 35 G 131
N 36 D 132
L 37 L 135
N 38 R 136
I 39 M 137
L 40 L 138
A 41 A 139
E 42 F 140
G 43 D 141
P 44 I 142
V 45 E 143
L 46 T 144
A 47 L 145
V 48 A 146
H 49 H 147
Q 50 A 148
S 51 G 149
D 52 A 150
E 53 A 151
L 54 A 152
L 55 G 153
N 56 A 154
K 57 Y 162
M 58 A 163
N 59 D 164
D 60 E 165
W 61 E 166
C 62 G 167
Q 63 A 168
K 64 R 169
T 65 V 170
H 66 I 171
S 67 T 172
E 68 W 173
N 69 K 174
G 70 N 175
L 71 I 176
I 72 D 177
E 73 L 178
R 74 P 179
I 75 Y 180
K 76 V 181
A 77 E 182
S 78 S 183
K 79 V 184
L 80 S 185
T 81 T 186
E 82 E 187
R 83 K 188
A 84 E 189
A 85 M 190
E 86 I 191
L 87 K 192
Q 88 R 193
T 89 F 194
L 90 L 195
D 91 K 196
F 92 V 197
L 93 I 198
K 94 Q 199
K 95 E 200
W 96 K 201
V 97 D 202
P 98 P 203
A 101 D 204
S 102 V 205
P 103 L 206
I 104 I 207
C 105 T 208
G 106 Y 209
N 107 N 210
S 108 G 211
I 109 D 212
A 110 N 213
Q 111 F 214
D 112 D 215
K 113 F 216
R 114 A 217
F 115 Y 218
L 116 L 219
V 117 K 220
K 118 K 221
Y 119 R 222
M 120 S 223
P 121 E 224
D 122 M 225
L 123 L 226
A 124 G 227
D 125 V 228
Y 126 K 229
F 127 F 230
TER
END

