
PFRMAT AL
TARGET T0109
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1a8l
A   77 M 1
S   78 G 2
K   79 L 3
L   80 I 4
T   81 S 5
E   82 D 6
R   83 A 7
A   84 D 8
A   85 K 9
E   86 K 10
L   87 V 11
Q   88 I 12
T   89 K 13
L   90 E 14
D   91 E 15
F   92 F 16
L   93 F 17
K   94 S 18
K   95 K 19
W   96 M 20
V   97 V 21
P   98 N 22
K   99 P 23
G  100 R 31
A  101 K 32
S  102 D 33
N  107 H 34
S  108 C 35
I  109 Q 36
A  110 Y 37
Q  111 C 38
D  112 D 39
K  113 Q 40
R  114 K 42
F  115 Q 43
L  116 L 44
V  117 V 45
K  118 Q 46
Y  119 E 47
M  120 L 48
P  121 S 49
D  122 E 50
L  123 L 51
A  124 T 52
D  125 D 53
Y  126 K 54
F  127 L 55
H  128 S 56
Y  129 Y 57
R  130 E 58
H  131 I 59
L  132 V 60
D  133 D 61
V  134 F 62
S  135 D 63
T  136 T 64
L  137 G 67
K  138 K 68
E  139 E 69
L  140 L 70
A  141 A 71
A  142 K 72
R  143 R 73
W  144 Y 74
K  145 R 75
P  146 I 76
E  147 D 77
I  148 R 78
L  149 A 79
E  150 F 96
G  151 G 97
F  152 L 98
K  153 P 99
K  154 A 100
E  155 G 101
N  156 H 102
T  157 E 103
H  158 F 104
L  159 A 105
A  160 A 106
L  161 L 108
D  162 E 109
D  163 D 110
I  164 I 111
R  165 V 112
E  166 D 113
S  167 V 114
I  168 S 115
K  169 R 116
E  170 E 117
L  171 E 118
A  172 T 119
TER
END

