
PFRMAT AL
TARGET T0109
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.48 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1qwfb
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1qwf_B
M   1     V    71
S   2     S    72
F   3     L    73
D   4     A    74
K   5     R    75
Q   6     R    76
N   7     P    77
L   8     L    78
I   9     P    79
W  10     P    80
I  11     L    81
D  12     P    82
TER
END

