
PFRMAT AL
TARGET T0108
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  5
PARENT 1CF3_A
REMARK DATE	1999-05-11
REMARK SCORE	 8.3	24.5	17/81 (20%)
F 49 F 72
G 50 G 73
V 51 S 74
N 52 S 75
P 53 V 76
D 54 D 77
S 55 H 78
P 56 A 79
I 57 Y 80
T 58 E 81
A 59 T 82
I 60 V 83
N 61 E 84
V 62 L 85
E 63 A 86
N 64 T 87
A 65 N 88
N 66 N 89
N 67 Q 90
A 68 T 91
L 69 A 92
K 70 L 93
I 71 I 94
S 72 R 95
N 73 S 96
L 74 G 97
N 75 N 98
S 76 G 99
K 77 L 100
G 78 G 101
S 79 G 102
N 80 S 103
D 81 T 104
L 82 L 105
S 83 V 106
E 84 N 107
G 85 G 108
N 86 G 109
F 87 T 110
W 88 W 111
A 89 T 112
N 90 R 113
V 91 P 114
R 92 K 116
I 93 A 117
S 94 Q 118
A 95 V 119
D 96 D 120
I 97 S 121
W 98 W 122
G 99 E 123
N 103 T 124
I 104 V 125
Y 105 F 126
G 106 G 127
D 107 N 128
T 108 E 129
K 109 G 130
L 110 W 131
T 111 N 132
M 112 W 133
D 113 D 134
V 114 N 135
I 115 V 136
A 116 A 137
P 117 A 138
T 118 Y 139
P 119 S 140
V 120 L 141
N 121 Q 142
V 122 A 143
S 123 E 144
I 124 R 145
A 125 A 146
A 126 R 147
I 127 A 148
P 128 P 149
TER
END

