
PFRMAT AL
TARGET T0108
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.77 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1qaxa1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and structure-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1qax_A
G   5     L   111
Q   6     M   112
Y   7     H   113
V   8     A   114
R   9     Q   115
A  10     V   116
R  11     Q   117
I  12     I   118
K  13     V   119
G  14     G   120
V  51     I   121
N  52     Q   122
P  53     D   123
D  54     P   124
S  55     L   125
P  56     N   126
I  57     A   127
T  58     R   128
A  59     L   129
I  60     S   130
N  61     L   131
V  62     L   132
E  63     R   133
N  64     R   134
A  65     K   135
N  66     D   136
N  67     E   137
A  68     I   138
L  69     I   139
K  70     E   140
I  71     L   141
S  72     A   142
N  73     N   143
L  74     R   144
N  75     K   145
S  76     D   146
K  77     Q   147
G  78     L   148
S  79     L   149
N  80     N   150
D  81     S   151
L  82     L   152
S  83     G   153
E  84     G   154
G  85     G   155
D 107     C   156
T 108     R   157
K 109     D   158
L 110     I   159
T 111     E   160
M 112     V   161
D 113     H   162
V 114     T   163
I 115     F   164
A 116     A   165
P 117     D   166
T 118     T   167
P 119     P   168
T 153     R   169
D 154     G   170
G 155     P   171
T 156     M   172
Y 157     L   173
K 158     V   174
A 159     A   175
T 160     H   176
L 161     L   177
T 162     I   178
I 163     V   179
S 164     D   180
T 165     V   181
N 166     R   182
D 167     D   183
S 168     A   184
P 169     M   185
N 170     G   186
N 172     A   187
T 173     N   188
I 174     T   189
A 175     V   190
T 176     N   191
D 177     T   192
A 178     M   193
A 179     A   194
D 180     E   195
S 181     A   196
V 182     V   197
V 183     A   198
T 184     P   199
N 185     L   200
M 186     M   201
I 187     E   202
L 188     A   203
F 189     I   204
V 190     T   205
G 191     G   206
S 192     G   207
N 193     Q   208
S 194     V   209
D 195     R   210
N 196     L   211
I 197     R   212
S 198     I   213
L 199     L   214
D 200     S   215
N 201     N   216
I 202     L   217
K 203     A   218
F 204     D   219
T 205     L   220
TER
END

