
PFRMAT AL
TARGET T0107
AUTHOR 7770-2312-5826
REMARK GROUP NAME: SHESTOPALOV. EXPERT GROUP.
REMARK GROUP LEADER: Shestopalov Boris V. TEAM: N0.
REMARK E-mail: shest@mail.cytspb.rssi.ru
METHOD Secondary structures predicted by DOUBLET CODE METHOD
METHOD (see SHESTOPALOV, ab initio secondary structure category)
METHOD and also relevant information from protein data bases.
METHOD Here PSI-BLAST (Altschul S.F., Madden T.L.,
METHOD Schaffer A.A., Zhang J., Zhang Z, Miller W &
METHOD Lipman D.J. /1997/. Nucl. Acid. Res. v. 25,
METHOD pp 3389-3402)is used.  
MODEL  1
PARENT 1jly_A
V   1  Q  26
A   2  Q  27
T   3  Y  28
A   4  G  29
K   5  L  30 
Y   6  L  31
G   7  Q  32  
T   8  F  33  
P   9  S  34
V  10  A  35
I  11  I  38
D  12  L  39
G  13  D  40
E  14  Q  44
I  15  F  45
D  16  E  46
E  17  V  47
I  18  E  48
W  19  P  49
N  20  S  50
T  21  K  51
T  22  T  52
I  25  Y  53
R  27  D  54
K  28  G  55
A  29  L  56
V  30  V  57
A  31  H  58
M  32  I  59
G  33  K  60
S  34  S  61
N  38  R  62
A  39  Y  63
T  40  T  64
A  41  N  65
K  42  K  66
V  43  Y  67
R  44  L  68
V  45  V  69
L  46  R  70
W  47  W  71
D  48  S  72
E  49  P  73
N  50  N  74
Y  51  H  75
L  52  Y  76
Y  53  W  77
V  54  I  78
L  55  T  79
A  56  A  80
I  57  S  81
V  58  A  82
K  59  N  83
D  60  E  84
P  61  P  85
N  64  D  86
K  65  E  87
D  66  N  88
N  67  K  89
S  68  S  90
N  69  N  91
W  71  W  92
E  72  A  93
Q  73  C  94
D  74  T  95
S  75  L  96
V  76  F  97
E  77  K  98
I  78  P  99
F  79  L 100
I  80  Y 101
D  81  E 103
E  82  E 104
N  83  G 105
N  84  N 106
H  85  M 107
K  86  K 108
T  87  K 109
G  88  R 111
Y  89  L 112
Y  90  L 113
E  91  H 114
D  92  V 115
D  93  Q 116
D  94  L 117
A  95  G 118
Q  96  H 119
F  97  Y 120
R  98  T 121
V  99  Q 122
N 100  N 123
Y 101  Y 124
T 106  T 125
F 107  V 126
G 110  G 127
G 111  G 128
S 112  S 129
A 114  F 130
R 115  V 131
F 116  S 132
K 117  Y 133
T 118  L 134
A 119  F 135
V 120  A 136
K 121  E 137
L 122  S 138
I 123  S 139
E 124  Q 140
G 125  G 144
G 126  S 145
Y 127  F 149
I 128  H 150
V 129  V 151
I 133  I 152
K 134  D 153
W 135  W 154
K 136  K 155
T 137  S 156
I 138  I 157
K 139  F 158
P 140  Q 159
T 141  F 160
P 142  P 161
N 143  K 162
T 144  G 163
V 145  Y 164
I 146  V 165
G 147  T 166
F 148  F 167
Q 151  K 168
N 153  G 169
D 154  N 170
N 156  N 171
K 158  G 172
G 159  K 173
R 161  Y 174
V 162  L 175
G 163  G 176
I 164  V 177
I 165  I 178
S 166  T 179
W 167  I 180
S 168  N 181
D 169  Q 182
P 170  L 183
T 171  P 184
N 172  C 185
N 173  L 186
S 174  Q 187
W 175  F 188
R 176  G 189
D 177  Y 190
P 178  D 191
S 179  N 192
K 180  L 193
F 181  N 194
G 182  D 195
N 183  P 196
L 184  H 200
R 185  Q 201
L 186  M 202
I 187  F 203
K 188  V 204
TER
END

