
PFRMAT AL
TARGET T0104
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1tc1_B
E 2 E 6
S 3 F 7
L 4 A 8
T 5 E 9
Q 6 K 10
Y 7 I 11
I 8 L 12
P 9 F 13
D 10 T 14
E 11 E 15
F 12 E 16
S 13 E 17
M 14 I 18
L 15 R 19
R 16 T 20
F 17 R 21
G 18 I 22
K 19 K 23
K 20 E 24
F 21 V 25
A 22 A 26
E 23 K 27
I 24 R 28
L 25 I 29
L 26 A 30
K 27 D 31
L 28 D 32
H 29 Y 33
T 30 K 34
E 31 G 35
K 32 K 36
A 33 G 37
I 34 L 45
M 35 V 46
V 36 L 47
Y 37 I 48
G 40 S 49
D 41 V 50
L 42 L 51
G 43 K 52
A 44 G 53
G 45 S 54
T 48 M 56
L 49 F 57
T 50 T 58
R 51 A 59
G 52 D 60
M 53 L 61
L 54 C 62
Q 55 R 63
G 56 A 64
I 57 L 65
G 58 C 66
H 59 D 67
Q 60 F 68
G 61 N 69
N 62 V 70
V 63 P 71
K 64 V 72
S 65 R 73
P 66 M 74
T 67 E 75
Y 68 F 76
T 69 I 77
L 70 C 78
V 71 V 79
E 72 S 80
E 73 S 81
Y 74 Y 82
N 75 G 83
I 76 E 84
A 77 G 85
G 78 L 86
K 79 T 87
A 90 S 88
D 91 S 89
P 92 G 90
E 93 Q 91
E 94 V 92
L 95 R 93
E 96 M 94
F 97 L 95
M 98 L 96
G 99 D 97
I 100 T 98
R 101 R 99
D 102 H 100
Y 103 S 101
F 104 I 102
N 105 E 103
T 106 G 104
D 107 H 105
S 108 H 106
I 109 V 107
C 110 L 108
L 111 I 109
I 112 V 110
E 113 E 111
E 116 N 121
K 117 Y 122
G 118 L 123
Q 119 Y 124
G 120 H 125
I 121 M 126
L 122 Y 127
P 123 F 128
E 124 T 129
A 125 R 130
D 126 R 131
I 127 P 132
L 128 A 133
V 129 L 135
N 130 K 136
I 131 T 137
D 132 V 138
Y 133 V 139
Y 134 L 140
D 135 L 141
D 136 D 142
A 137 G 146
R 138 R 147
N 139 R 148
I 140 V 149
E 141 P 150
L 142 F 151
I 143 S 152
A 144 A 153
TER
END

