

PFRMAT AL
TARGET T0104
AUTHOR 9885-9936-6780
METHOD Smith-Waterman Alignment alignment of secondary structure
METHOD annotated sequence
MODEL 1
PARENT 1am4_F
E   31   P  501
K   32   Q  502
A   33   T  503
I   34   I  504
M   35   K  505
V   36   C  506
Y   37   V  507
L   38   V  508
N   39   V  509
G   40   G  510
D   41   D  511
L   42   G  512
G   43   A  513
A   44   V  514
G   45   G  515
K   46   K  516
T   47   T  517
T   48   C  518
L   49   L  519
T   50   L  520
R   51   I  521
G   52   S  522
M   53   Y  523
L   54   T  524
Q   55   T  525
I   57   N  526
G   58   K  527
H   59   Y  532
Q   60   V  533
N   62   P  534
V   63   T  535
K   64   V  536
S   65   F  537
P   66   D  538
T   67   N  539
Y   68   Y  540
T   69   A  541
V   71   V  542
E   72   T  543
E   73   V  544
Y   74   M  545
I   76   I  546
A   77   G  547
G   78   G  548
K   79   E  549
M   80   P  550
Y   82   Y  551
H   83   T  552
F   84   L  553
D   85   G  554
L   86   L  555
Y   87   F  556
R   88   D  557
L   89   T  558
A   90   A  559
D   91   G  560
P   92   Q  561
E   93   E  562
E   94   D  563
L   95   Y  564
E   96   D  565
F   97   L  567
M   98   R  568
G   99   P  569
I  100   L  570
D  102   S  571
Y  103   Y  572
F  104   P  573
N  105   Q  574
T  106   T  575
D  107   D  576
S  108   V  577
I  109   F  578
C  110   L  579
L  111   V  580
I  112   F  582
E  113   S  583
W  114   V  584
S  115   S  586
E  116   P  587
K  117   S  588
G  118   S  589
Q  119   F  590
G  120   E  591
I  121   N  592
L  122   V  593
P  123   K  594
E  124   E  595
A  125   K  596
D  126   W  597
V  129   V  598
N  130   E  600
I  131   I  601
D  132   T  602
Y  133   H  603
Y  134   H  604
D  135   C  605
D  136   P  606
A  137   K  607
R  138   T  608
N  139   P  609
I  140   F  610
E  141   L  611
L  142   L  612
I  143   V  613
A  144   G  614
Q  145   T  615
T  146   Q  616
N  147   I  617
L  148   D  618
G  149   L  619
K  150   P  623
N  151   S  624
I  152   T  625
I  153   I  626
S  154   E  627
A  155   K  628
F  156   L  629
S  157   A  630
N  158   K  631
TER
END
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Ajay K. Royyuru, PhD                   Phone: (914) 945-1335
Manager, Structural Biology            Fax: (914) 945-4104
Computational Biology Center          mailto:ajayr@us.ibm.com
IBM Research                                 --- IBM Internal ---
T. J. Watson Research Center           Phone: T/L 862-1335
P.O. Box 218, Route 134                  Fax: T/L 862-4104
Yorktown Heights, NY 10598            Office: 13-106D


