
PFRMAT AL
TARGET T0102
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 1tvs
I 7 I 6
P 8 P 7
G 13 G 8
T 14 T 9
V 15 A 10
L 16 E 11
N 17 N 13
V 18 L 14
V 19 Q 15
E 20 K 16
A 21 S 17
G 22 S 18
G 23 G 19
W 24 G 20
V 25 V 21
T 26 N 25
T 27 T 26
I 28 G 27
V 29 G 28
S 30 Q 29
I 31 E 30
L 32 A 31
T 33 R 32
A 34 P 33
V 35 N 34
G 36 Y 35
S 37 H 36
G 38 C 37
G 39 Q 38
L 40 L 39
S 41 C 40
L 42 F 41
L 43 L 42
A 44 R 43
A 45 S 44
A 46 L 45
G 47 G 46
R 48 I 47
E 49 D 48
S 50 Y 49
I 51 L 50
K 52 D 51
A 53 A 52
Y 54 S 53
L 55 L 54
K 56 R 55
K 57 K 56
E 58 K 57
I 59 N 58
K 60 K 59
K 61 Q 60
K 62 R 61
G 63 L 62
K 64 K 63
A 66 A 64
V 67 I 65
TER
END

