
PFRMAT AL
TARGET T0102
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.18 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1tf3a3
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1tf3_A
K   3     K    71 
E   4     N    72 
F   5     F    73 
G   6     T    74 
V  35     C    75 
G  36     D    76 
S  37     S    77 
G  38     D    78 
G  39     G    79 
L  40     C    80 
S  41     D    81 
L  42     L    82 
R  48     R    83 
E  49     F    84 
S  50     T    85 
I  51     T    86 
K  52     K    87 
A  53     A    88 
Y  54     N    89 
L  55     M    90 
K  56     K    91 
K  57     K    92 
E  58     H    93 
I  59     F    94 
K  60     N    95 
K  61     R    96 
K  62     F    97 
G  63     H    98 
K  64     N    99 
R  65     I   100 
A  66     K   101 
TER
END

