
PFRMAT AL
TARGET T0100
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1air
A   25 A 1
T   26 T 2
T   27 A 11
Y   28 G 12
N   29 G 13
A   30 N 14
V   31 V 15
V   32 T 16
S   33 G 17
K   34 A 18
S   35 V 19
S   36 S 20
S   37 K 21
D   38 T 22
G   39 A 23
K   40 T 24
T   41 S 25
F   42 M 26
K   43 Q 27
T   44 D 28
I   45 I 29
A   46 V 30
D   47 N 31
A   48 I 32
I   49 I 33
A   50 D 34
S   51 A 35
A   52 A 36
P   53 R 37
A   54 L 38
G   55 D 39
S   56 A 40
T   57 N 41
P   58 G 42
I   61 K 43
L   62 K 44
I   63 V 45
K   64 K 46
N   65 G 47
G   66 G 48
V   67 A 49
Y   68 Y 50
N   69 P 51
E   70 L 52
R   71 V 53
L   72 I 54
T   73 T 55
I   74 Y 56
T   75 T 57
R   76 G 58
N   77 N 59
N   78 N 70
L   79 I 71
H   80 C 72
L   81 G 73
G   83 Q 74
E   84 W 75
S   85 S 76
R   86 K 77
N   87 D 78
G   88 P 79
A   89 R 80
V   90 G 81
I   91 V 82
A   92 E 83
A   93 I 84
A   94 K 85
T   95 E 86
A   96 F 87
A   97 T 88
G   98 K 89
T   99 G 90
L  100 I 91
K  101 T 92
S  102 I 93
D  103 I 94
G  104 G 95
S  105 A 96
K  106 N 97
W  107 G 98
G  108 S 99
T  109 S 100
A  110 A 101
G  111 N 102
S  112 F 103
S  113 G 104
T  114 I 105
I  115 W 106
T  116 I 107
I  117 K 108
S  118 K 109
A  119 S 110
K  120 S 111
D  121 D 112
F  122 V 113
S  123 V 114
A  124 V 115
Q  125 Q 116
S  126 N 117
L  127 M 118
T  128 R 119
I  129 I 120
R  130 A 127
N  131 K 128
D  132 D 129
F  133 G 130
D  134 D 131
F  135 M 132
P  136 A 151
A  137 N 152
N  138 H 153
Q  139 E 154
A  140 C 155
K  141 D 156
S  142 G 157
D  143 T 158
S  144 P 159
D  145 D 160
S  146 N 161
S  147 D 162
K  148 T 163
I  149 T 164
K  150 F 165
D  151 E 166
T  152 S 167
Q  153 A 168
A  154 V 169
V  155 D 170
A  156 I 171
L  157 K 172
Y  158 T 177
V  159 V 178
T  160 T 179
K  161 V 180
S  162 S 181
G  163 Y 182
D  164 N 183
R  165 Y 184
A  166 I 185
Y  167 H 186
F  168 V 188
K  169 K 189
D  170 K 190
V  171 V 191
S  172 G 192
L  173 L 193
V  174 D 194
G  175 G 195
Y  176 N 216
Q  177 A 217
D  178 R 218
T  179 L 219
L  180 P 220
Y  181 L 221
V  182 Q 222
S  183 R 223
G  184 G 224
G  185 G 225
R  186 L 226
S  187 V 227
F  188 H 228
F  189 A 229
S  190 Y 230
D  191 L 233
C  192 Y 234
R  193 T 235
I  194 N 236
S  195 I 237
G  196 T 238
T  197 G 239
V  198 S 240
D  199 G 241
F  200 L 242
I  201 V 244
F  202 R 245
G  203 Q 246
D  204 N 247
G  205 G 248
T  206 Q 249
A  207 A 250
L  208 L 251
F  209 I 252
N  210 E 253
N  211 N 254
C  212 N 255
D  213 W 256
L  214 F 257
V  215 E 258
S  216 I 261
R  217 N 262
Y  218 P 263
R  219 V 264
A  220 T 265
D  221 S 266
V  222 R 267
K  223 Y 268
S  224 D 269
G  225 G 270
N  226 K 271
V  227 N 272
S  228 F 273
G  229 G 274
Y  230 T 275
L  231 W 276
T  232 V 277
S  235 L 278
T  236 K 279
N  237 G 280
I  238 N 281
N  239 N 282
Q  240 I 283
K  241 T 284
Y  242 K 285
G  243 P 286
L  244 A 287
V  245 D 288
I  246 F 289
T  247 S 290
N  248 T 291
S  249 Y 292
R  250 S 293
V  251 I 294
I  252 T 295
R  253 W 296
E  254 T 297
S  255 A 298
D  256 D 299
S  257 T 300
V  258 K 301
P  259 P 302
Y  263 Y 303
G  264 V 304
L  265 N 305
G  266 A 306
R  267 D 307
P  268 S 308
W  269 W 309
H  270 T 310
P  271 S 311
T  272 T 312
T  273 G 313
T  274 T 314
F  275 F 315
S  276 P 316
D  277 T 317
G  278 V 318
R  279 A 319
Y  280 Y 320
A  281 N 321
D  282 Y 322
P  283 S 323
N  284 P 324
A  285 V 325
I  286 S 326
G  287 A 327
Q  288 Q 328
T  289 C 329
V  290 V 330
N  293 K 331
T  294 D 332
S  295 K 333
M  296 L 334
D  297 P 335
N  298 G 336
H  299 Y 337
I  300 A 338
G  302 G 339
W  303 V 340
D  304 G 341
K  305 K 342
M  306 N 343
S  307 L 344
G  308 A 345
K  309 T 346
D  310 L 347
K  311 T 348
N  312 S 349
G  313 T 350
N  314 A 351
T  315 C 352
TER
END

