
PFRMAT AL
TARGET T0100
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1qun_B
A   50 F 1
S   51 A 2
A   52 C 3
P   53 K 4
A   54 T 5
G   55 A 6
S   56 N 7
T   57 G 8
F   59 T 9
V   60 A 10
I   61 I 11
L   62 P 12
I   63 I 13
K   64 G 14
N   65 G 15
G   66 G 16
V   67 S 17
E   70 A 18
R   71 N 19
L   72 V 20
T   73 Y 21
I   74 V 22
T   75 N 23
R   76 L 24
N   77 A 25
N   78 P 26
L   79 V 27
H   80 V 28
L   81 N 29
K   82 V 30
G   83 G 31
E   84 Q 32
G   88 N 33
A   89 L 34
V   90 V 35
I   91 V 36
A   92 D 37
A   93 L 38
A   94 S 39
T   95 T 40
A   96 Q 41
A   97 I 42
G   98 F 43
T   99 C 44
L  100 H 45
K  101 N 46
S  102 D 47
D  103 Y 48
G  104 P 49
S  105 E 50
K  106 T 51
W  107 I 52
G  108 T 53
T  109 D 54
A  110 Y 55
G  111 V 56
S  112 T 57
S  113 F 71
T  114 S 72
I  115 G 73
T  116 T 74
I  117 V 75
S  118 K 76
A  119 Y 77
K  120 S 78
D  121 G 79
Q  125 S 80
S  126 S 81
L  127 Y 82
T  128 P 83
I  129 F 84
R  130 P 85
N  131 T 86
D  132 T 87
F  133 S 88
D  134 E 89
F  135 T 90
P  136 P 91
A  137 R 92
A  140 V 93
K  141 V 94
S  142 Y 95
D  143 N 96
S  144 S 97
D  145 R 98
S  146 T 99
S  147 D 100
K  148 K 101
I  149 P 102
K  150 W 103
D  151 P 104
V  155 V 105
A  156 A 106
L  157 L 107
Y  158 Y 108
V  159 L 109
T  160 T 110
K  161 S 113
S  162 S 114
G  163 A 115
D  164 G 116
R  165 G 117
A  166 V 118
Y  167 A 119
F  168 I 120
K  169 K 121
D  170 L 125
V  171 I 126
S  172 A 127
L  173 V 128
V  174 L 129
G  175 I 130
Y  176 L 131
Q  177 R 132
D  178 Q 133
T  179 T 134
L  180 N 135
Y  181 N 136
V  182 Y 137
S  183 N 138
G  184 S 139
G  185 D 140
R  186 D 141
S  187 Q 143
F  188 F 144
F  189 V 145
S  190 W 146
D  191 N 147
I  201 I 148
F  202 Y 149
G  203 A 150
D  204 N 151
G  205 N 152
T  206 D 153
A  207 V 154
L  208 V 155
F  209 V 156
N  210 G 159
N  211 G 160
C  212 C 161
D  213 D 162
L  214 V 163
V  215 S 164
S  216 A 165
R  217 R 166
Y  218 V 170
R  219 T 171
A  220 L 172
D  221 P 173
V  222 D 174
K  223 Y 175
S  224 P 176
G  225 G 177
N  226 Q 191
V  227 N 192
S  228 L 193
G  229 G 194
Y  230 Y 195
L  231 Y 196
T  232 L 197
A  233 S 198
P  234 G 199
S  235 T 200
T  236 T 201
N  237 A 202
I  238 D 203
N  239 A 204
Q  240 G 205
K  241 N 206
Y  242 S 207
G  243 G 222
L  244 V 223
V  245 Q 224
I  246 L 225
T  247 T 226
N  248 N 228
S  249 G 229
R  250 T 230
V  251 I 231
I  252 I 232
R  253 P 233
E  254 A 234
S  255 N 235
D  256 N 236
S  257 T 237
V  258 V 238
P  259 G 244
A  260 T 245
K  261 S 246
S  262 A 247
Y  263 V 248
G  264 S 249
L  265 L 250
G  266 G 251
R  267 R 258
T  274 T 259
F  275 G 260
S  276 G 261
D  277 Q 262
G  278 V 263
R  279 T 264
Y  280 A 265
A  281 G 266
D  282 N 267
P  283 V 268
N  284 Q 269
A  285 S 270
I  286 I 271
G  287 I 272
Q  288 G 273
T  289 V 274
V  290 T 275
F  291 F 276
L  292 V 277
N  293 Y 278
T  294 Q 279
TER
END

