
PFRMAT AL
TARGET T0097
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1quu_A
G  123 G 1
C  124 R 8
L  125 L 9
P  126 E 10
A  127 R 11
Y  128 L 12
D  129 E 13
A  130 H 14
L  131 L 15
A  132 A 16
G  133 E 17
Q  134 K 18
F  135 F 19
I  136 E 43
E  137 S 44
A  138 A 45
S  139 S 46
S  140 L 47
R  141 T 48
E  142 E 49
A  143 V 50
R  144 R 51
A  146 A 52
I  147 L 53
L  148 L 54
K  149 R 55
Q  150 K 56
G  151 H 57
Q  152 E 58
D  153 A 59
G  154 F 60
L  155 E 61
S  156 S 62
G  157 D 63
V  158 L 64
K  159 A 65
E  160 A 66
T  161 H 67
D  162 Q 68
K  163 D 69
K  164 R 70
W  165 V 71
S  167 E 72
Q  168 Q 73
Y  169 I 74
L  170 A 75
K  171 A 76
I  172 I 77
M  173 A 78
G  174 Q 79
K  175 E 80
I  176 L 81
L  177 N 82
D  178 E 83
Q  179 L 84
G  180 D 85
E  181 Y 86
D  182 H 87
F  183 D 88
P  184 A 89
A  185 V 90
S  186 N 91
E  187 V 92
L  188 N 93
A  189 D 94
R  190 R 95
I  191 C 96
S  192 Q 97
K  193 K 98
L  194 I 99
I  195 C 100
E  196 D 101
K  203 Q 102
K  204 W 103
E  205 D 104
E  206 R 105
L  207 L 106
Q  208 Q 111
R  209 K 112
S  210 R 113
L  211 R 114
N  212 E 115
I  213 A 116
L  214 L 117
T  215 E 118
A  216 R 119
F  217 M 120
R  218 E 121
K  219 K 122
K  220 L 123
G  221 L 124
TER
END

